You are here

Home

M747DRAFT_366053-T1, M747DRAFT_366053-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366053-T1
Unique NameM747DRAFT_366053-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:927573..928999+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366053-T1 ID=M747DRAFT_366053-T1|Name=M747DRAFT_366053-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1427bp|location=Sequence derived from alignment at KZ851899.1:927573..928999+ (Aspergillus niger ATCC 13496)
ATGTCCCGTATATACCAACTAAGCCGAGCATTTCAGCGCAGCCAAGTTGG
CGCGCTCCGGCCGCGCTCTCTACTACCCGCTCGGTCATCCCGCTGCGGCT
TCAGCACCAGCGCCACACGCCCATTAATGGAATTAACAGGCTTCACCGAA
GAGCAACTAACAGTGCGCGACGCCGTATCCGCCATCTGCGCCAAGTTCCC
CAACACATACTGGCAGGATTGCGACCAAAATGAGCGCGACCCGAATGAGT
TCCACGCCGCCCTAGCCCGAGACGGATGGTTAGGAATCGCGCTGCCTGAG
GAACTAGGAGGCGCAGGTCTAGGTACACCCAAATCTTCCTATTCTATCAT
CCTTCATTGCAATTGCAACTAATACCACGTCCAGGAATCTCCGAAGCAAC
AATGATGATGCAAACCATCACCCAATCCGGTGCCGGCATGGCCGGCGCGC
AAGCCATCCACGCCAACGTGTACGCAACACAACCACTCGCCCGCTTCGGC
ACCCGCGAGCAACTGGAAGAAACCATCCCCAAGATCATCAATGGTACATG
GCGCACCTGCTTTGGTGTCACAGAGCCCAACACGGGTCTGGAAACGCTCA
AGCTGAAGACGCTAGCTACCAAAAAGTCCCGCGGGGATAGTGATATCTAC
TCCATCTCAGGCCAGAAGATCTGGATTACCTGCGCGCAAGTCGCTAGCAA
AATGATCCTGTTAGCGCGCACGACCCCCTTGGAAGAAGTTACCAAGTCGA
CACAAGGCCTATCTATGTTCTGCATCGACCTCGACCGCACACAGCCCGGT
CTGGATATGCGCAAGATCAAGAAGATGGGCGGACGTGCCGTCGACGCCAA
CGAAGTCTTCTTCGATGGGTACGAAGTGCCCGCGAACACGCTCATCGGGC
AGGAAAACGAAGGGTTCCGGATCATTCTGCATGGTATGAACGCGGAGCGG
TGTTTGCTGGCGGGTGAGGCATTGGGGCTGGGGTATGCGGCGCTGGAGCG
AGCAGCTGATTATGCGAAGGAGAGGGTGGTGTTTGGACGGCCGATTGGGC
AGAATCAGGGCATTGCGCATCCGTTGGCGGATGCGTATATGAGGTTGGAG
GCGGCCAAGCTGGCGACGTATCATGCTGCGAGATTGTATGATGCGTCGAA
GAAGGATGAGGGGATTCCGCTGCATTCCGTCGGGGTGGCGTGTAACAGTG
CCAAGTATTTGGCTGCTGAGGCGGCGTTTACGGCGTGTGAGAGGGCGGTG
CTGAGCCATGGGGGCATGGGGTATGCAATGGAATATGATGTGGAGAGGTA
CTTGAGGGAGTGTCTGGTGCCCAGGATCGCGCCGGTCAGTCGCGAGATGA
TTTTGAATTATGTTAGTGAGAAGGTGTTGCAGTTGCCGAGGAGTTATTAA
ATGGCTGTTTACAATCATCAGGCAAGC
back to top

Coding sequence (CDS) from alignment at KZ851899.1:927573..928999+

>M747DRAFT_366053-T1 ID=M747DRAFT_366053-T1|Name=M747DRAFT_366053-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2676bp|location=Sequence derived from alignment at KZ851899.1:927573..928999+ (Aspergillus niger ATCC 13496)
ATGTCCCGTATATACCAACTAAGCCGAGCATTTCAGCGCAGCCAAGTTGG
CGCGCTCCGGCCGCGCTCTCTACTACCCGCTCGGTCATCCCGCTGCGGCT
TCAGCACCAGCGCCACACGCCCATTAATGGAATTAACAGGCTTCACCGAA
GAGCAACTAACAGTGCGCGACGCCGTATCCGCCATCTGCGCCAAGTTCCC
CAACACATACTGGCAGGATTGCGACCAAAATGAGCGCGACCCGAATGAGT
TCCACGCCGCCCTAGCCCGAGACGGATGGTTAGGAATCGCGCTGCCTGAG
GAACTAGGAGGCGCAGGTCTAGGAATCTCCGAAGCAACAATGATGATGCA
AACCATCACCCAATCCGGTGCCGGCATGGCCGGCGCGCAAGCCATCCACG
CCAACGTGTACGCAACACAACCACTCGCCCGCTTCGGCACCCGCGAGCAA
CTGGAAGAAACCATCCCCAAGATCATCAATGGTACATGGCGCACCTGCTT
TGGTGTCACAGAGCCCAACACGGGTCTGGAAACGCTCAAGCTGAAGACGC
TAGCTACCAAAAAGTCCCGCGGGGATAGTGATATCTACTCCATCTCAGGC
CAGAAGATCTGGATTACCTGCGCGCAAGTCGCTAGCAAAATGATCCTGTT
AGCGCGCACGACCCCCTTGGAAGAAGTTACCAAGTCGACACAAGGCCTAT
CTATGTTCTGCATCGACCTCGACCGCACACAGCCCGGTCTGGATATGCGC
AAGATCAAGAAGATGGGCGGACGTGCCGTCGACGCCAACGAAGTCTTCTT
CGATGGGTACGAAGTGCCCGCGAACACGCTCATCGGGCAGGAAAACGAAG
GGTTCCGGATCATTCTGCATGGTATGAACGCGGAGCGGTGTTTGCTGGCG
GGTGAGGCATTGGGGCTGGGGTATGCGGCGCTGGAGCGAGCAGCTGATTA
TGCGAAGGAGAGGGTGGTGTTTGGACGGCCGATTGGGCAGAATCAGGGCA
TTGCGCATCCGTTGGCGGATGCGTATATGAGGTTGGAGGCGGCCAAGCTG
GCGACGTATCATGCTGCGAGATTGTATGATGCGTCGAAGAAGGATGAGGG
GATTCCGCTGCATTCCGTCGGGGTGGCGTGTAACAGTGCCAAGTATTTGG
CTGCTGAGGCGGCGTTTACGGCGTGTGAGAGGGCGGTGCTGAGCCATGGG
GGCATGGGGTATGCAATGGAATATGATGTGGAGAGGTACTTGAGGGAGTG
TCTGGTGCCCAGGATCGCGCCGGTCAGTCGCGAGATGATTTTGAATTATG
TTAGTGAGAAGGTGTTGCAGTTGCCGAGGAGTTATTAAATGTCCCGTATA
TACCAACTAAGCCGAGCATTTCAGCGCAGCCAAGTTGGCGCGCTCCGGCC
GCGCTCTCTACTACCCGCTCGGTCATCCCGCTGCGGCTTCAGCACCAGCG
CCACACGCCCATTAATGGAATTAACAGGCTTCACCGAAGAGCAACTAACA
GTGCGCGACGCCGTATCCGCCATCTGCGCCAAGTTCCCCAACACATACTG
GCAGGATTGCGACCAAAATGAGCGCGACCCGAATGAGTTCCACGCCGCCC
TAGCCCGAGACGGATGGTTAGGAATCGCGCTGCCTGAGGAACTAGGAGGC
GCAGGTCTAGGAATCTCCGAAGCAACAATGATGATGCAAACCATCACCCA
ATCCGGTGCCGGCATGGCCGGCGCGCAAGCCATCCACGCCAACGTGTACG
CAACACAACCACTCGCCCGCTTCGGCACCCGCGAGCAACTGGAAGAAACC
ATCCCCAAGATCATCAATGGTACATGGCGCACCTGCTTTGGTGTCACAGA
GCCCAACACGGGTCTGGAAACGCTCAAGCTGAAGACGCTAGCTACCAAAA
AGTCCCGCGGGGATAGTGATATCTACTCCATCTCAGGCCAGAAGATCTGG
ATTACCTGCGCGCAAGTCGCTAGCAAAATGATCCTGTTAGCGCGCACGAC
CCCCTTGGAAGAAGTTACCAAGTCGACACAAGGCCTATCTATGTTCTGCA
TCGACCTCGACCGCACACAGCCCGGTCTGGATATGCGCAAGATCAAGAAG
ATGGGCGGACGTGCCGTCGACGCCAACGAAGTCTTCTTCGATGGGTACGA
AGTGCCCGCGAACACGCTCATCGGGCAGGAAAACGAAGGGTTCCGGATCA
TTCTGCATGGTATGAACGCGGAGCGGTGTTTGCTGGCGGGTGAGGCATTG
GGGCTGGGGTATGCGGCGCTGGAGCGAGCAGCTGATTATGCGAAGGAGAG
GGTGGTGTTTGGACGGCCGATTGGGCAGAATCAGGGCATTGCGCATCCGT
TGGCGGATGCGTATATGAGGTTGGAGGCGGCCAAGCTGGCGACGTATCAT
GCTGCGAGATTGTATGATGCGTCGAAGAAGGATGAGGGGATTCCGCTGCA
TTCCGTCGGGGTGGCGTGTAACAGTGCCAAGTATTTGGCTGCTGAGGCGG
CGTTTACGGCGTGTGAGAGGGCGGTGCTGAGCCATGGGGGCATGGGGTAT
GCAATGGAATATGATGTGGAGAGGTACTTGAGGGAGTGTCTGGTGCCCAG
GATCGCGCCGGTCAGTCGCGAGATGATTTTGAATTATGTTAGTGAGAAGG
TGTTGCAGTTGCCGAGGAGTTATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_366053M747DRAFT_366053Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366053-T1.exon1M747DRAFT_366053-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_366053-T1.exon2M747DRAFT_366053-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366053-T1.cdsM747DRAFT_366053-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366053-T1.utr3p1M747DRAFT_366053-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366053-T1M747DRAFT_366053-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036250
DBxrefInterPro:IPR009100
DBxrefInterPro:IPR037069
DBxrefInterPro:IPR013786
DBxrefInterPro:IPR006091
DBxrefInterPro:IPR009075
DBxrefPFAM:PF02771
DBxrefPFAM:PF02770
DBxrefPFAM:PF08028
DBxrefPFAM:PF00441
Productacyl-CoA dehydrogenase NM domain-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:927573..928999 +
Powered by Drupal