You are here

Home

M747DRAFT_366796-T1, M747DRAFT_366796-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366796-T1
Unique NameM747DRAFT_366796-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:178732..180139+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366796-T1 ID=M747DRAFT_366796-T1|Name=M747DRAFT_366796-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1408bp|location=Sequence derived from alignment at KZ851901.1:178732..180139+ (Aspergillus niger ATCC 13496)
CCAACCGCTTCTGGTTCGAATTGCTGCTGCTCCCCCCCTCTGCCAATTGA
CCTCCCCCCTCGTCATCCCCGCTCTTTCGCGCGCTTCCTCGACTTCCGCG
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCGTAAGTCGCCCCATCCAGCTTC
GAGTCAGGTCTGCCTCGGTGCATATCATCATCAGGATTTCAAGGGGGCCA
TCTGAGCCTGTCTATCGCTTTTCATCAGTCTATGGAGGATTGTTCTGTCT
CAATGGATCTGCGGCTGATGAGCTGGTCGTCTAGTTACACTATCTTCTAC
CCCTTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCT
GCGTCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTG
AGGCTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAG
GATGGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCAT
CTACTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGA
GTGAGTAACCAGTAAATTCATGTGTAGGTCATGAGACTCCTACTAACGAT
ATTACGTAGCTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTG
CTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGA
AATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAAGCGGCATCTG
TATTTGCCAATATGACACCGGACACGGTGTCCATGTGACACTCCCCTTGG
AAGAGATGCGAGAAAAACATGATATTAGAAAGAAAGCCTTTCCGACCTAG
AAAGCTTGGCTTGTAGCCACCCCCATTTATTCCCACGCTGTACATATCTC
ACGCCCAACCCCCTTCGCCTCCCTGATTACCTCCTGTACTAGTCGGGTCT
ACCGGAATTGATCAGATCGGCCACTCGATTCCGGGTCTGGTTTTGTCTTT
GATGTTGAAGGAAATCCTGCATGTTGTGTTGTTCTTTTTACTCTTGTTTG
TCTAGGGATCCAATCAAAGAATTTTTCCTTTGTGATGTGCGGGAATAGTG
CTTAAACAACGACCTTTCATCAGTGCAGCAACCATGCTCAACTATAAGCT
ATTGGAAC
back to top

Coding sequence (CDS) from alignment at KZ851901.1:178732..180139+

>M747DRAFT_366796-T1 ID=M747DRAFT_366796-T1|Name=M747DRAFT_366796-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2025bp|location=Sequence derived from alignment at KZ851901.1:178732..180139+ (Aspergillus niger ATCC 13496)
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCTTACACTATCTTCTACCCCTTC
GAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCGTCG
CTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGGCTA
TCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGATGGA
AGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTACTG
CGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGACTTCCA
ACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAACAAGGAG
AAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGCTGCTAT
CAGAGCCGATGCTCCTTACCGCTAAATGGCCGCCCCCAAGTCCGTCGCCA
GGCTCGTCGCCTACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCC
TTGGGATCCATCGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCC
AGCTGGTCCCCCCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGG
ACGAAGGTGCTGAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATG
GCTGAGTTGTTGCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACC
TCCTTACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCCGTT
TCCGTGGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGTTGC
ATTGCCTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCACCAT
CGAGGCTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACGATA
TCGACATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGCCCT
GTCGACGCTATTGTTGAGACTTCCAACGCCGAATATGCCACCGAGACCCG
TGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGT
GGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAA
ATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTAC
AGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTT
CCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTC
CGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGA
CAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACG
TCGTGCTGGAGCAGTTCTTCAGACCTCCTTACACTATCTTCTACCCCTTC
GAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCGTCG
CTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGGCTA
TCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGATGGA
AGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTACTG
CGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGACTTCCA
ACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAACAAGGAG
AAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGCTGCTAT
CAGAGCCGATGCTCCTTACCGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_366796M747DRAFT_366796Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366796-T1M747DRAFT_366796-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366796-T1.utr5p1M747DRAFT_366796-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366796-T1.exon1M747DRAFT_366796-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_366796-T1.exon2M747DRAFT_366796-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_366796-T1.exon3M747DRAFT_366796-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366796-T1.cdsM747DRAFT_366796-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366796-T1.utr3p1M747DRAFT_366796-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017900
DBxrefInterPro:IPR010226
DBxrefInterPro:IPR017896
DBxrefPFAM:PF13187
DBxrefPFAM:PF12838
DBxrefPFAM:PF12800
DBxrefPFAM:PF13237
DBxrefPFAM:PF00037
ProductNADH-ubiquinone oxidoreductase 23 kDa subunit mitochondrial precursor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:178732..180139 +
Powered by Drupal