You are here

Home

M747DRAFT_366957-T1, M747DRAFT_366957-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366957-T1
Unique NameM747DRAFT_366957-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:721125..723040-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366957-T1 ID=M747DRAFT_366957-T1|Name=M747DRAFT_366957-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1916bp|location=Sequence derived from alignment at KZ851901.1:721125..723040- (Aspergillus niger ATCC 13496)
CGCCCGGCGATCCTATGGTTTGCTCGCACCGGTTTCTCTTTATTCTTTTC
CCCTCCATCACCATGTTTTCTGGCTCTGACTTCTGTTCTGTCTTGCACGC
TAAAATTCCCTCTTACGTGGCCCTCTATTCACTGCCCCGAAATCTCTGAT
CTTGATGAATGTTTCCCCTCCCCATACGGGTAGCCATTGCTTGTGAGGGG
TTTCCATTTCGGGAAACTCATCTGATCTACAGGGTCAAGTGCTGCCACCC
ATAACACTTCATCATCCACCACAACTCATATAATACTGCTGGTGGATTAA
TTACTCTTCATCTGATCTGGTTCTGTGTCACTACTTACACGTGATTTTCA
ATACATCTTATACCATATTTGATCTGTCGTTCTTATAGACATCCTTGTCA
CCTGACCAACAATACTTAATAGTTGTCGTACCTACTCATTGAATCACCCT
CACTGCATCGTTGTTGATATGTCAGAACTATACTGTCCTATTCCGCCCAG
GGATCAGGACATCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGAT
CTACCTTTGTACTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTA
CAGTTACTGAAAACGTAGGTACTAGAAACCACATTAAGAATATCCTTTAT
GGTCATCATGTCTCTTCTATAGGTACTAAATAGTAGTATGTCATAACCAG
GTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGGCAATCCC
ACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAAGGATGTA
GCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCCTCGGACC
CCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAGGTGTACC
ACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTGGTTTCAC
GGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTATAAACCT
CTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTCGCTTTTC
TTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGGACTTTCA
GTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCTACGATGA
GATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTATACATCG
ACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTGCGAAAGC
GACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCCAAATACC
TAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATCAACAAAG
CCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCAAGTCTCG
GAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCTGGAACCT
GGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAGGGCATCT
TGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTTGTGGGTC
CAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGAATTCTGC
GGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTACAACATCA
TCGGAATTTGAGTCAGTTAAAAGGTAATTATCGGTCGGTAACTTATAGAG
ATGAGTCTTTATATAAGTCTTTGATTAAACCGCAATGAGCGCTAGAGATG
TCTGAGTCACTAGTAGTATCGGATGTTATGCATTGACTTTCGGGGACCGT
GACGGAAACATATTTTGCGATCAAAGAAAACCTGTTTGTATCAGACGTTG
GGACTAGCTACTATATAGCACATCAAAACGAAGCAGAGAGGGGCATATTC
TTTCCCGATTACAAGT
back to top

Coding sequence (CDS) from alignment at KZ851901.1:721125..723040-

>M747DRAFT_366957-T1 ID=M747DRAFT_366957-T1|Name=M747DRAFT_366957-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2214bp|location=Sequence derived from alignment at KZ851901.1:721125..723040- (Aspergillus niger ATCC 13496)
GTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGGCAATCCC
ACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAAGGATGTA
GCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCCTCGGACC
CCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAGGTGTACC
ACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTGGTTTCAC
GGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTATAAACCT
CTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTCGCTTTTC
TTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGGACTTTCA
GTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCTACGATGA
GATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTATACATCG
ACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTGCGAAAGC
GACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCCAAATACC
TAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATCAACAAAG
CCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCAAGTCTCG
GAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCTGGAACCT
GGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAGGGCATCT
TGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTTGTGGGTC
CAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGAATTCTGC
GGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTACAACATCA
TCGGAATTTGAATGTCAGAACTATACTGTCCTATTCCGCCCAGGGATCAG
GACATCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGATCTACCTT
TGTACTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTACAGTTAC
TGAAAACGTCATTAGCATCCACTGGACTCGAGCAAACAAGACAGAAGTGG
CAATCCCACTGGCACTCTGCATTGACCGACGATGACCTCGTCTGGCTCAA
GGATGTAGCGCAATGCAGAACACTCCGTTTACCATTGAGCTTCTACTCCC
TCGGACCCCTGTTCTGTCGGGGAACAGCCTTTGAAGGGGATCCATCAGAG
GTGTACCACCATTGCTGGAGTACTGTGAAGCATCTAATCGAAAAATGTTG
GTTTCACGGTATCGGAATCCTCATTGATTTCCAGGCCAGCGCCAGCGGTA
TAAACCTCTGTGCCAGTGCGAAAGATCGGACAATAGCTCGGGACTGCGTC
GCTTTTCTTGCTCAGGAAATAACCTTCCATTCTATGTCCGCGGTAGTCGG
ACTTTCAGTATCCTCCGGATGTGAACCTGCCCCTGACATGTGCGAATGCT
ACGATGAGATCCTTAAGATAGCCAATGCCATTGACGCATGTTTGCCTGTA
TACATCGACGACAACCAAGCTCAATGCAACAAACGAGTCTTCAAGGGCTG
CGAAAGCGACATCCCTCAGTTCAAGAGCGACATCTCAATCGGTAAAATCC
AAATACCTAGCCAAATGATGCTACCCGAAACAGAGGTCCGAGAGAAGATC
AACAAAGCCAAAGCCGAACGATCAGGATTCCAGGAAAAGGTTTTGTCGCA
AGTCTCGGAATCTTGGGGCTCGAACGAACGTCAAAGCTTCGTCCATGGCT
GGAACCTGGGATACGATGATGCGTTGCGCTTCTTTGGCGCTGCTGTTCAG
GGCATCTTGGCTCCGCGAAAAGGTGCAGACAAGATCTATGATATAGAGTT
GTGGGTCCAGCAGCGCAAAAGAGATATAGACCCGGAGCAGCTCGGGGAGA
ATTCTGCGGCATGGGAGGATGGTCTTCGGAGAGGTATTCAAGATTTTTAC
AACATCATCGGAATTTGAATGTCAGAACTATACTGTCCTATTCCGCCCAG
GGATCAGGACATCTACCGCTTCCGGCAGCAGTTTGGAGCGAACCTGGGAT
CTACCTTTGTACTCGGTCCGCACGATAATACTGGCGAGTCAAATGAATTA
CAGTTACTGAAAAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_366957M747DRAFT_366957Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366957-T1M747DRAFT_366957-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366957-T1.cdsM747DRAFT_366957-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366957-T1.utr3p1M747DRAFT_366957-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366957-T1.exon2M747DRAFT_366957-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_366957-T1.exon1M747DRAFT_366957-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366957-T1.utr5p1M747DRAFT_366957-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteCAZy:GH5_49
DBxrefInterPro:IPR017853
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:721125..723040 -
Powered by Drupal