You are here

Home

M747DRAFT_366987-T1, M747DRAFT_366987-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366987-T1
Unique NameM747DRAFT_366987-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:812429..813932+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366987-T1 ID=M747DRAFT_366987-T1|Name=M747DRAFT_366987-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1504bp|location=Sequence derived from alignment at KZ851901.1:812429..813932+ (Aspergillus niger ATCC 13496)
AACATTTCCCCTCAGTGCTTTAGAGTCGTGCTGCCCACTTTTCTGCTTAG
TACTTTAACGCTCGCGATATCCTTCGTCTGAACTAAGGCAATATACATCT
CAACTCCACTATCTACTGATCAATCCAATCGCTCCCTGCATACACCAACC
ATCGTCACAATGTCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCG
CAAGACCTTCACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAA
CAGACCTGGTTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTC
AAGATTCACTCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCT
CCGTGACTTTACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTC
TGATCGCTGGCCAGGTTGACTTCATTGTACACTCTCTCAAGGGTGCGTTT
CCACTCGTTCTTTATCTCGCTCAAAGTGACAAAATTAACTTATCTCTATC
ATTACAGATGTGCCGACTCTTCTCCCCTCCTCCTGCACCCTCGGCCCTAT
GATGAAGCGCGAAGACACAAGAGACGTCCTGGTCATGAAGAAGGGCCTTT
CATACACAAGTCTGGCCGAGCTGCCAGAAGGCTCCGTCGTCGGCACTTCA
TCCATCCGTCGGACCGCCCAACTCGCCCGTCGCTACCCCCACCTCAAAGT
TATGGATGTGCGCGGTAACATTGGCACTCGGTTGTCGAAGCTAGATGCAG
AGGATGGCCCTTTCACGTGCCTCATCCTGGCTGCTGCTGGTTTGCTGAGA
TTGGATCTGGGCGATCGTATCACCAGCTATCTGGATTCGAAGAACGGAGG
AATGCTCTATGCTGTCGGTCAGGGTGCTCTCGGCATTGAGATCCGGAAGG
ATGACCAGCAGGTGCTGGATATGCTACAGAACATCGGCCACAAGGAGACC
ACTTTTGCTTGCTTGGCAGAGCGGAGCCTCCTGCGTACCCTTGAAGGTGG
ATGCAGTGCGCCGTTGGGTGTTGAGTCCGAATGGGTTAATGGTGCTTTGA
CGATGCGGTCCATTGTGGTTAGTGTGGATGGCAAGGAGAGCGCTGAGGTT
GAGGTTGATGGGGCTGTTGATTCGCCTCAGGCTGCGGAAGAGTTCGGTGT
TACGGTGGCTAAGGCATTGGTTGAGAAGGGCGCGGGCAAGATCCTGGACG
AAATCCAGCGCAACAAGCAGACTGCTTAGGTATAGAGGCTGTAAAGACTA
TGTGCTGGAGATGCTGGTCTTCTCCTTCACGGGAGATATGATGATACAAT
GGACATATTTAGATGGATACCCCATATGAAAAAAGAAAGGTGTTACGTGT
CTGCTGAAACTAATTGTCATTTACACTGCTGAACAGGCTATCTGGGAGAT
TCACGACCGGTTGCGCAGTATTCTATCATTTGGTGCTCGTATCACACCGG
CCAATATAAGATGGCCAAACAGCAGTTAGAGGTATATATATAAGTTTCAT
GCAT
back to top

Coding sequence (CDS) from alignment at KZ851901.1:812429..813932+

>M747DRAFT_366987-T1 ID=M747DRAFT_366987-T1|Name=M747DRAFT_366987-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2010bp|location=Sequence derived from alignment at KZ851901.1:812429..813932+ (Aspergillus niger ATCC 13496)
ATGTCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAGACCTT
CACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGACCTGG
TTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGATTCAC
TCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGTGACTT
TACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGATCGCTG
GCCAGGTTGACTTCATTGTACACTCTCTCAAGGATGTGCCGACTCTTCTC
CCCTCCTCCTGCACCCTCGGCCCTATGATGAAGCGCGAAGACACAAGAGA
CGTCCTGGTCATGAAGAAGGGCCTTTCATACACAAGTCTGGCCGAGCTGC
CAGAAGGCTCCGTCGTCGGCACTTCATCCATCCGTCGGACCGCCCAACTC
GCCCGTCGCTACCCCCACCTCAAAGTTATGGATGTGCGCGGTAACATTGG
CACTCGGTTGTCGAAGCTAGATGCAGAGGATGGCCCTTTCACGTGCCTCA
TCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCTGGGCGATCGTATCACC
AGCTATCTGGATTCGAAGAACGGAGGAATGCTCTATGCTGTCGGTCAGGG
TGCTCTCGGCATTGAGATCCGGAAGGATGACCAGCAGGTGCTGGATATGC
TACAGAACATCGGCCACAAGGAGACCACTTTTGCTTGCTTGGCAGAGCGG
AGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTGCGCCGTTGGGTGTTGA
GTCCGAATGGGTTAATGGTGCTTTGACGATGCGGTCCATTGTGGTTAGTG
TGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGATGGGGCTGTTGATTCG
CCTCAGGCTGCGGAAGAGTTCGGTGTTACGGTGGCTAAGGCATTGGTTGA
GAAGGGCGCGGGCAAGATCCTGGACGAAATCCAGCGCAACAAGCAGACTG
CTTAGATGTCTTCTGCCCCGCCCCACGCCACCAACCCCTCATCGCGCAAG
ACCTTCACCATTGGCACGCGCAAGTCCAAGCTTGCTCTGCTTCAAACAGA
CCTGGTTCAAGCGGCGCTCAAGCAAACATGGCCGGACTATGAATTCAAGA
TTCACTCCCGAGAGACCGCAGGCGACCAGAACACGACCATTGCGCTCCGT
GACTTTACGACCAAGAACCTGTGGACCCAGGAACTGGAGGACCTTCTGAT
CGCTGGCCAGGTTGACTTCATTGTACACTCTCTCAAGGATGTGCCGACTC
TTCTCCCCTCCTCCTGCACCCTCGGCCCTATGATGAAGCGCGAAGACACA
AGAGACGTCCTGGTCATGAAGAAGGGCCTTTCATACACAAGTCTGGCCGA
GCTGCCAGAAGGCTCCGTCGTCGGCACTTCATCCATCCGTCGGACCGCCC
AACTCGCCCGTCGCTACCCCCACCTCAAAGTTATGGATGTGCGCGGTAAC
ATTGGCACTCGGTTGTCGAAGCTAGATGCAGAGGATGGCCCTTTCACGTG
CCTCATCCTGGCTGCTGCTGGTTTGCTGAGATTGGATCTGGGCGATCGTA
TCACCAGCTATCTGGATTCGAAGAACGGAGGAATGCTCTATGCTGTCGGT
CAGGGTGCTCTCGGCATTGAGATCCGGAAGGATGACCAGCAGGTGCTGGA
TATGCTACAGAACATCGGCCACAAGGAGACCACTTTTGCTTGCTTGGCAG
AGCGGAGCCTCCTGCGTACCCTTGAAGGTGGATGCAGTGCGCCGTTGGGT
GTTGAGTCCGAATGGGTTAATGGTGCTTTGACGATGCGGTCCATTGTGGT
TAGTGTGGATGGCAAGGAGAGCGCTGAGGTTGAGGTTGATGGGGCTGTTG
ATTCGCCTCAGGCTGCGGAAGAGTTCGGTGTTACGGTGGCTAAGGCATTG
GTTGAGAAGGGCGCGGGCAAGATCCTGGACGAAATCCAGCGCAACAAGCA
GACTGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0018160peptidyl-pyrromethane cofactor linkage
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004418hydroxymethylbilane synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_366987M747DRAFT_366987Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366987-T1.utr5p1M747DRAFT_366987-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366987-T1.exon1M747DRAFT_366987-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_366987-T1.exon2M747DRAFT_366987-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366987-T1.cdsM747DRAFT_366987-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366987-T1.utr3p1M747DRAFT_366987-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366987-T1M747DRAFT_366987-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262YP5
DBxrefInterPro:IPR022419
DBxrefInterPro:IPR036803
DBxrefInterPro:IPR022417
DBxrefInterPro:IPR022418
DBxrefInterPro:IPR000860
DBxrefPFAM:PF03900
DBxrefPFAM:PF01379
Productporphobilinogen deaminase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:812429..813932 +
Powered by Drupal