You are here

Home

M747DRAFT_367646-T1, M747DRAFT_367646-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_367646-T1
Unique NameM747DRAFT_367646-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:807171..808219-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_367646-T1 ID=M747DRAFT_367646-T1|Name=M747DRAFT_367646-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1049bp|location=Sequence derived from alignment at KZ851903.1:807171..808219- (Aspergillus niger ATCC 13496)
CCAACAACCACAACCACAACCACCATGTCTACACCAGAAAACACCCTCGC
CATTCTCGGCTGCGGTACATCCATTCCCTAACCCTGCATACACACCCATC
CATCAATCCAATTGACGAACCAACCACAGGAAAAATGGGCATCGCCATCC
TCAACGGCCTGTTAAACACCACCACCACTACAGAATCCACCACCAACACC
CCCCTCCCAACGCACTTCAGCGCCACCGTCCGCAGCACCTCCTCCCTCAC
CACCCTCCAATCCCAATTCCAATCCCATCTCACCACCTCATCCCTAACCA
TCCACTCCTCCACCCACAACCACGCTGCCATCACCTCCGCCTCCACCATA
ATCCTCGCCTGCGATCCCACCGATATCCCCTCCCTCCTCAGCGACCCCTC
CACCAGATCCGCCCTCTGCAGTCCTCCACCCACCTCATCCCCAAAACTCC
TCATCAGCATCGCCGCCGGCTGGACCGTCTCTTCCCTGCGCGAGCTCCTC
TCCCCTCCCCAAGAATCTATCTTGTACATCCTCCGCGCGCTGCCCAATAT
CTGCGCCACTATCTCCCAGTCTATCACGGCCATCGAGCTTCCCTCTGAAG
AGGTGCAATTGAGTGCTAGGACTCGTGTGCCGCAAGCGTTGATTTCCCTG
ACGGAGGGGATTTTCAGTAGGATAGGACGCACGGTGCAGGTTAGGGCTGA
TCAGATGGATACGTTTACGGTGCTTGGGGGGTCCACGCCTGCGTTCATAG
CGGTGTTTGTGGAGGCGTTGGTGGATGGGGGCGTCGCGATGGGGTTAGGG
AGGGAGGAGGCGCGGATGACGGTTGCGCAGGTGTTGAGGGGCACGGGGGA
TTTGTTGCTTGGTGGGGAGCATCCGGCGTTGCTGAAGGAGAGGGGGACTT
CGCCGGGGGGGTGTACTATGGGGGGACTTTGTGTGTTGGAGGAGGGAGGG
TTTAGGGGGTTGGTCGGGAGGGCGGTTAGGGAGGGGGTCACTGTGGCGGA
GGGGATGGGAAGGGGGGTGGGGTTGGTTAATGGGACGGGGAGGAAGTAG
back to top

Coding sequence (CDS) from alignment at KZ851903.1:807171..808219-

>M747DRAFT_367646-T1 ID=M747DRAFT_367646-T1|Name=M747DRAFT_367646-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1920bp|location=Sequence derived from alignment at KZ851903.1:807171..808219- (Aspergillus niger ATCC 13496)
GAAAAATGGGCATCGCCATCCTCAACGGCCTGTTAAACACCACCACCACT
ACAGAATCCACCACCAACACCCCCCTCCCAACGCACTTCAGCGCCACCGT
CCGCAGCACCTCCTCCCTCACCACCCTCCAATCCCAATTCCAATCCCATC
TCACCACCTCATCCCTAACCATCCACTCCTCCACCCACAACCACGCTGCC
ATCACCTCCGCCTCCACCATAATCCTCGCCTGCGATCCCACCGATATCCC
CTCCCTCCTCAGCGACCCCTCCACCAGATCCGCCCTCTGCAGTCCTCCAC
CCACCTCATCCCCAAAACTCCTCATCAGCATCGCCGCCGGCTGGACCGTC
TCTTCCCTGCGCGAGCTCCTCTCCCCTCCCCAAGAATCTATCTTGTACAT
CCTCCGCGCGCTGCCCAATATCTGCGCCACTATCTCCCAGTCTATCACGG
CCATCGAGCTTCCCTCTGAAGAGGTGCAATTGAGTGCTAGGACTCGTGTG
CCGCAAGCGTTGATTTCCCTGACGGAGGGGATTTTCAGTAGGATAGGACG
CACGGTGCAGGTTAGGGCTGATCAGATGGATACGTTTACGGTGCTTGGGG
GGTCCACGCCTGCGTTCATAGCGGTGTTTGTGGAGGCGTTGGTGGATGGG
GGCGTCGCGATGGGGTTAGGGAGGGAGGAGGCGCGGATGACGGTTGCGCA
GGTGTTGAGGGGCACGGGGGATTTGTTGCTTGGTGGGGAGCATCCGGCGT
TGCTGAAGGAGAGGGGGACTTCGCCGGGGGGGTGTACTATGGGGGGACTT
TGTGTGTTGGAGGAGGGAGGGTTTAGGGGGTTGGTCGGGAGGGCGGTTAG
GGAGGGGGTCACTGTGGCGGAGGGGATGGGAAGGGGGGTGGGGTTGGTTA
ATGGGACGGGGAGGAAGTAGATGTCTACACCAGAAAACACCCTCGCCATT
CTCGGCTGCGGAAAAATGGGCATCGCCATCCTCAACGGCCTGTTAAACAC
CACCACCACTACAGAATCCACCACCAACACCCCCCTCCCAACGCACTTCA
GCGCCACCGTCCGCAGCACCTCCTCCCTCACCACCCTCCAATCCCAATTC
CAATCCCATCTCACCACCTCATCCCTAACCATCCACTCCTCCACCCACAA
CCACGCTGCCATCACCTCCGCCTCCACCATAATCCTCGCCTGCGATCCCA
CCGATATCCCCTCCCTCCTCAGCGACCCCTCCACCAGATCCGCCCTCTGC
AGTCCTCCACCCACCTCATCCCCAAAACTCCTCATCAGCATCGCCGCCGG
CTGGACCGTCTCTTCCCTGCGCGAGCTCCTCTCCCCTCCCCAAGAATCTA
TCTTGTACATCCTCCGCGCGCTGCCCAATATCTGCGCCACTATCTCCCAG
TCTATCACGGCCATCGAGCTTCCCTCTGAAGAGGTGCAATTGAGTGCTAG
GACTCGTGTGCCGCAAGCGTTGATTTCCCTGACGGAGGGGATTTTCAGTA
GGATAGGACGCACGGTGCAGGTTAGGGCTGATCAGATGGATACGTTTACG
GTGCTTGGGGGGTCCACGCCTGCGTTCATAGCGGTGTTTGTGGAGGCGTT
GGTGGATGGGGGCGTCGCGATGGGGTTAGGGAGGGAGGAGGCGCGGATGA
CGGTTGCGCAGGTGTTGAGGGGCACGGGGGATTTGTTGCTTGGTGGGGAG
CATCCGGCGTTGCTGAAGGAGAGGGGGACTTCGCCGGGGGGGTGTACTAT
GGGGGGACTTTGTGTGTTGGAGGAGGGAGGGTTTAGGGGGTTGGTCGGGA
GGGCGGTTAGGGAGGGGGTCACTGTGGCGGAGGGGATGGGAAGGGGGGTG
GGGTTGGTTAATGGGACGGGGAGGAAGTAGATGTCTACACCAGAAAACAC
CCTCGCCATTCTCGGCTGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004735pyrroline-5-carboxylate reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006561proline biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_367646M747DRAFT_367646Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367646-T1M747DRAFT_367646-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367646-T1.cdsM747DRAFT_367646-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367646-T1.exon2M747DRAFT_367646-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_367646-T1.exon1M747DRAFT_367646-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367646-T1.utr5p1M747DRAFT_367646-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029036
DBxrefInterPro:IPR000304
DBxrefInterPro:IPR028939
DBxrefPFAM:PF14748
DBxrefPFAM:PF03807
Productpyrroline-5-carboxylate reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:807171..808219 -
Powered by Drupal