You are here

Home

M747DRAFT_367763-T1, M747DRAFT_367763-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_367763-T1
Unique NameM747DRAFT_367763-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:83286..85306-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_367763-T1 ID=M747DRAFT_367763-T1|Name=M747DRAFT_367763-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2021bp|location=Sequence derived from alignment at KZ851904.1:83286..85306- (Aspergillus niger ATCC 13496)
CAAAATGTTCTCTTTGCGGACGGCGCAACCCGCGCAGGTAAGTCGATGGT
TCCTTGCTTTTTGACCGATCAATTCCTTTGTCCGACCCGACTTCGCTCGC
TCGATTCCTTGCCCTTACTTCCCTCCCACCGCCGCCCGCTACATCCTTTC
GCCCGGCTGAATTAGAGAGAAACGCCTGGGCGCACTTGGAATACAATCTC
CCACCTGCTTTGCTCAATTGCCTTTCGTTGACGATCTACGATTTTGATTA
TTTCCTATTCCCTCTAACGCGGTTATGCTTGGCAGTCTTTGCTCCGTCGC
GTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATGTGCGTC
AGCCCTTCCATTCGCATGCAGTACCGTACTGCTAGAGACACATGGTTTAT
TGACTCTATAACTCAAGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGC
CCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGGTACCTAC
ATTCGTCTCTTTCACAACTTGATCATTTTGCTGATGCTTCGGTGATTCGC
TTTCTTAAAGGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGAC
TATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTA
GCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCC
ATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCAC
CCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGG
AGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTAC
AAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGA
GGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGT
CCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCC
TTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAA
GGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACA
AGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCGAC
AACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGT
TATGCCCAACCTGTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTG
TGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCT
GTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGA
CCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCC
ACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGAT
GTGATCGGTGAGGGGTGAGTTTCAGACTTTTGTTTCAACCTTCCAGCTTG
ATTCAGAGCTGTCGCTAATGCGAAATTCTCTAGTAAAACGAGGACCCGCG
ACATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGAT
AAGATGGAGGCTGCTCTGTAAATTATTACCCACTTGAAAACCGACCTCCC
ACCTTGCATGTGGTACCTGCTACAATTATGATGATGAGAGCTTGTATAGG
CCAGTGAAATGTTTTTGTTTCTATTTGTAGACCATGTCTGGCCTTTCTAA
CTGTCTCTATAATCTGTACCCCCTTTCACCCCATTTGACGCAACGACGCG
CGGCGTCGGACACAAAATTGTGTGCTATGGCGTGTAAAACTGTACACAAA
CGTTTGAATTTGGAAGCGTGCCTCTTCAATATCTTGGACGGCTCAGTAAA
GAACCCAGTAGACAGACGACCACTGGGGTATCCAGTGTTTAGTAGATACG
AACCCCAACGCCCTGACATTGGTGGTGATATTATCCCCTTTGGGACAGTA
TTGGCTCGCCCGGAGGCAAAG
back to top

Coding sequence (CDS) from alignment at KZ851904.1:83286..85306-

>M747DRAFT_367763-T1 ID=M747DRAFT_367763-T1|Name=M747DRAFT_367763-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5790bp|location=Sequence derived from alignment at KZ851904.1:83286..85306- (Aspergillus niger ATCC 13496)
TAAAACGAGGACCCGCGACATGGGTGGACAGGCTACCACCCACGAGTTCA
CCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGACGGAATCG
GAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCGACAACGTT
CCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACCGGTAACAA
ACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCGCCGTAACA
AGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCTCCGGCCAC
CAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTCGCCTCTAT
CGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGAGAATGTTG
ATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTGGTCTCGAA
CACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATCACTCGCGC
CAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCTTGCCAACA
ACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGAAGCTTGCG
GATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAACTACCCGAC
TTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCAGGCTGTTT
CCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTGTACGGTGGC
ATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGTGTTGTCCC
TGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGGCTGCCGTC
ACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTAGCGCTATG
ATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGACGACCATGC
CAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGGCCTTTGCT
AGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGCAAATACAC
CGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGTTGCGGCGCCGACTTCC
TTCCGTTCCTCCATCTCGGCAAGATATGTTCTCTTTGCGGACGGCGCAAC
CCGCGCAGTAAAACGAGGACCCGCGACATGGGTGGACAGGCTACCACCCA
CGAGTTCACCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCTGTAAGTGA
CGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTTCAAGGCCG
ACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTGTTGACACC
GGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCTTCTCTGCG
CCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGTTGAGCGCT
CCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGGATATTTTC
GCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGACCCGTCACGA
GAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGTGAATACTCTG
GTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGAAGATTATC
ACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGTTTCGCTCT
TGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAACATCATGA
AGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCGCCGAGAAC
TACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACGCCTCCATGCA
GGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCCCAACCTGT
ACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTGGACCTGGT
GTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTCGAGCCAGG
CTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGCTAACCCTA
GCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGGGATTGGAC
GACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGATCGGTGAGGG
CCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGTATGGCGGC
AAATACACCGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGTTGCGGCGC
CGACTTCCTTCCGTTCCTCCATCTCGGCAAGATATGTTCTCTTTGCGGAC
GGCGCAACCCGCGCAGTAAAACGAGGACCCGCGACATGGGTGGACAGGCT
ACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGATGGAGGCTGCTCT
GTAAGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAGACTATCTT
CAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGTTAGCGGTG
TTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGTCCATTGCT
TCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTCACCCCGGT
TGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCAGGAGCTGG
ATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCTACAAGACC
CGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACCGAGGGTGA
ATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGAGTCCCTGA
AGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTGCCTTTGGT
TTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCACAAGGCCAA
CATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCACAAGGTCG
CCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCGACAACGCC
TCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATGGTTATGCC
CAACCTGTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCTTGTGGGTG
GACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTGCTGTGTTC
GAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAGGACCAGGC
TAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACGCCACCTGG
GATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATGATGTGATC
GGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCCCACTAAGT
ATGGCGGCAAATACACCGTCACTCTTATCCCAGTCTTTGCTCCGTCGCGT
TGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATATGTTCTCT
TTGCGGACGGCGCAACCCGCGCAGTAAAACGAGGACCCGCGACATGGGTG
GACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATAAGATGGAG
GCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCTGAATCGGTCAAG
ACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAGGTAGATGT
TAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTTCAAGGAGT
CCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTATCCTCTTC
ACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCTCTCCGTCA
GGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACATTCCCGGCT
ACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTGAGAACACC
GAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGGGTTGTTGA
GTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGCCAAGTTTG
CCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTTGCATCCAC
AAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGCACCTTCCA
CAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACATGATTGTCG
ACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCGACGTTATG
GTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACATTGGTTCTGCTCT
TGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCGCGACGTTG
CTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCAAGGGCAAG
GACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATGCTTCTACG
CCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGCCGTCTATG
ATGTGATCGGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATCTTCAAGCC
CACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGTCTTTGCTC
CGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCGGCAAGATA
TGTTCTCTTTGCGGACGGCGCAACCCGCGCAGTAAAACGAGGACCCGCGA
CATGGGTGGACAGGCTACCACCCACGAGTTCACCAGGGCAGTCTTGGATA
AGATGGAGGCTGCTCTGTAAGTGACGGAATCGGAGCCGAGGTTGCTGAAT
CGGTCAAGACTATCTTCAAGGCCGACAACGTTCCCATCGAGTGGGAGCAG
GTAGATGTTAGCGGTGTTGACACCGGTAACAAACACTCAGAGGAGCTTTT
CAAGGAGTCCATTGCTTCTCTGCGCCGTAACAAGCTGGGTCTCAAGGGTA
TCCTCTTCACCCCGGTTGAGCGCTCCGGCCACCAGTCGTTCAACGTTGCT
CTCCGTCAGGAGCTGGATATTTTCGCCTCTATCGTCCTCATCAAGAACAT
TCCCGGCTACAAGACCCGTCACGAGAATGTTGATCTTTGCATTATCCGTG
AGAACACCGAGGGTGAATACTCTGGTCTCGAACACCAGTCCGTGCAGGGG
GTTGTTGAGTCCCTGAAGATTATCACTCGCGCCAAATCTGAGCGCATTGC
CAAGTTTGCCTTTGGTTTCGCTCTTGCCAACAACCGCAAGAAGGTTACTT
GCATCCACAAGGCCAACATCATGAAGCTTGCGGATGGTCTTTTCCGTAGC
ACCTTCCACAAGGTCGCCGAGAACTACCCGACTTTGGAGGTTAACGACAT
GATTGTCGACAACGCCTCCATGCAGGCTGTTTCCCGGCCCCAGCAGTTCG
ACGTTATGGTTATGCCCAACCTGTACGGTGGCATTCTCTCCAACATTGGT
TCTGCTCTTGTGGGTGGACCTGGTGTTGTCCCTGGTTGCAACATGGGCCG
CGACGTTGCTGTGTTCGAGCCAGGCTGCCGTCACGTTGGCCTTGACATCA
AGGGCAAGGACCAGGCTAACCCTAGCGCTATGATCCTTTCTGGCTCTATG
CTTCTACGCCACCTGGGATTGGACGACCATGCCAACCGCATCTCCAAGGC
CGTCTATGATGTGATCGGTGAGGGCCTTTGCTAGCGTTCAGTCCGATATC
TTCAAGCCCACTAAGTATGGCGGCAAATACACCGTCACTCTTATCCCAGT
CTTTGCTCCGTCGCGTTGCGGCGCCGACTTCCTTCCGTTCCTCCATCTCG
GCAAGATATGTTCTCTTTGCGGACGGCGCAACCCGCGCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0000287magnesium ion binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH1M747DRAFT_367763Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367763-T1M747DRAFT_367763-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367763-T1.cdsM747DRAFT_367763-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367763-T1.utr3p1M747DRAFT_367763-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367763-T1.exon5M747DRAFT_367763-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_367763-T1.exon4M747DRAFT_367763-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_367763-T1.exon3M747DRAFT_367763-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_367763-T1.exon2M747DRAFT_367763-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_367763-T1.exon1M747DRAFT_367763-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_367763-T1.utr5p1M747DRAFT_367763-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004434
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
Productisocitrate dehydrogenase (NAD( )) idh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:83286..85306 -
Powered by Drupal