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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851906.1:326175..328096+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_368407-T1 ID=M747DRAFT_368407-T1|Name=M747DRAFT_368407-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1922bp|location=Sequence derived from alignment at KZ851906.1:326175..328096+ (Aspergillus niger ATCC 13496)
CCTTCATTCAGCTTTCTACTGTCCATCCATCAATTCCCACTACGCACCTG
TCCACAGTGCGAATTTTGATACTACTCGATTGTTATTTTCAGTTTTCAGT
TCCGACAAAAGACCCTCCCCAACTGTTCGAGATGGACCGCAGTTTGGACG
AGATTATCGCGGAGCGTCCTGTAAGGTCCCTGCTAACGCCTCCGGGATGA
CAAGTCTCAGCTGGTCTGCTAGACACCACACCCTGCATGTGCGCTGACTT
GGTTTCGTGTATCAGAAGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCA
AGGTCGTCGCCGTGATGGCGTAAGAAAGGTATTTCCTCATCCCTGTCATC
ATCTCATCGTGAGCTGCTGCTGTTTCTTGCGTCTGTTTTGCGCGTGTCGA
TGCTAACCAGTGCATTGCTTCCCGCAGGTCCTCCCTCCTTGTCTCCTTTC
GAGCATTGCTCGCGCATCGTGATAAGCAAATTTCGCTGGCCTCGTAGCAT
CGTCTCTTGCACAGGCAGACCGCCGCGAAGAGCCGCAGAAAGATGGAGCT
GTTTACGTGATACCTAGTGTGACTTCGAGCTGACCTTCTCTCTCTACTCG
ACTACAACAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTGTAATTAC
CTTTCCCCCCTATTGCTTTCTGTCCAGTCCTACAGCCCGAATGATGGGAT
CGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAAGTACGAA
GACGACAGAGATGGTGCGTTATACGACTCTCAATATGGCGAATAGCCATG
GGAAATCATCCATGATCGGTCATTCTTAACACCTTACTCAGCACGCCCTT
CTCGTGCCCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAA
CAGTATGTTTATCCAGTGGCGCTTCGGTGAACGAAGCTGACCTGTACAGA
CACAGCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTA
CGACATTACAGAAACCGATCTCGAGGTAGGCCTCATTCCAGTCCCCGCGT
TTTTTCCTACTGAGCTCTGACATATGCAATGTAAAAGGACCTGTTCACCC
GCATCGGACCAATCAGTAATGTTTCTCTCGTTTACGACCGGGCAGGACGT
TCCGAAGGAGTCGCCTTTGTGACCTACACTCATATCGGCGATGCGCGAAC
CGCGATTAGAGAATTCGACGGCGCAAACGCCAAAGGCCAGCCTATTCGTT
TAACACTGATCTCTACCGGTGCCGGAAGACGCGACCGCAACCCATTTGAC
AACGTGGAACGCTCGAAGGGAAGTCTATTTGACCGCGTCGAGAGACCCCG
TGACCGCGACGCACGGAGTCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTG
ATGGAGGTGCACGCCGCCGTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGG
TACCGGCGCAGTGACGTCTCCAAACCGGCTCCCGAGCACATTGACAGATA
CATTCCTGGTCAGCGGTCGCCGACTCGCAACCGCGGCGCTACGAACGGGC
GCCGCCAAGGCGGTGGAGGTGAGAACAAGGGCGACAGCCGTCGCATGGTT
AACGGACGGCCCAGAAAGACACAGGAAGAGCTCGATCAAGAAATGGACGA
TTACTGGGGTGGCTCCGGCAACGCTGGTGCCGGCGCAGCTGATAAAGAAG
TTGTCCCTGACGAGCCTCAGCAGATTGCACCGGCGTCTGCGGCCGCTGCT
GGTGATGATGATATCGACATGATTGAGTGAGGGACTCATTTCGATTGGAA
TCTTCTAGTCTGACATTCACGCCCACTTGCGAGGGCTTTTTGATGGCTTT
GCCTTCTTTTCATCACATGTAACTAGTATCAATACGGGTTGGAATACAAA
AGACGTCTGGAATAATAAAGCC back to topCoding sequence (CDS) from alignment at KZ851906.1:326175..328096+ >M747DRAFT_368407-T1 ID=M747DRAFT_368407-T1|Name=M747DRAFT_368407-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7014bp|location=Sequence derived from alignment at KZ851906.1:326175..328096+ (Aspergillus niger ATCC 13496)
ATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGAATCA
GAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTAAGAA
AGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCATGAC
AAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCC
GCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTA
GCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACC
GATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCT
CGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACA
CTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAAC
GCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAG
ACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTAT
TTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCC
GGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCG
TCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGG
CTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGC
AACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAA
GGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAG
AGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGT
GCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGC
ACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGT
GAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGAAT
CAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTAAG
AAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCATG
ACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGT
CCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATC
TAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAA
CCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCT
CTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTA
CACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAA
ACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGA
AGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCT
ATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCC
CCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGT
CGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACC
GGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTC
GCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAAC
AAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGA
AGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTG
GTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATT
GCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGA
GTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGA
ATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTA
AGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCA
TGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGAC
GTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCA
TCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGA
AACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTT
CTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACC
TACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGC
AAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCG
GAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGT
CTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAG
CCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTG
GTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAA
CCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGAC
TCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGA
ACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAG
GAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGC
TGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGA
TTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATT
GAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCA
GAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCG
TAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTT
CATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCG
ACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTG
CATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACA
GAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGT
TTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGA
CCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGC
GCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGC
CGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAA
GTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTC
AGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCG
TGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCA
AACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCG
ACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGA
GAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACAC
AGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAAC
GCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCA
GATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGA
TTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAG
CAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGG
CGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGG
TTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCC
CGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCAC
TGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTA
CAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAAT
GTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGT
GACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACG
GCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGT
GCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGG
AAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTC
TCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGT
CGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTC
CAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGC
CGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGT
GAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGAC
ACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCA
ACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAG
CAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACAT
GATTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTA
AGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGAT
GGCGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTG
GGTTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCC
CCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGC
ACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACAT
TACAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTA
ATGTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTT
GTGACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGA
CGGCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCG
GTGCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAG
GGAAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAG
TCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCC
GTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTC
TCCAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTC
GCCGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAG
GTGAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAG
ACACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGG
CAACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTC
AGCAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGAC
ATGATTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCC
TAAGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTG
ATGGCGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGAC
TGGGTTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGC
CCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACA
GCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGAC
ATTACAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAG
TAATGTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCT
TTGTGACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTC
GACGGCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTAC
CGGTGCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGA
AGGGAAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGG
AGTCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCG
CCGTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACG
TCTCCAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGG
TCGCCGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGG
AGGTGAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAA
AGACACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCC
GGCAACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCC
TCAGCAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCG
ACATGATTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR025715 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF13865 |
| Product | RNA-binding domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851906.1 | supercontig | KZ851906.1:326175..328096 + |
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