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M747DRAFT_368550-T1, M747DRAFT_368550-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_368550-T1
Unique NameM747DRAFT_368550-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:904721..905960+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_368550-T1 ID=M747DRAFT_368550-T1|Name=M747DRAFT_368550-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1240bp|location=Sequence derived from alignment at KZ851906.1:904721..905960+ (Aspergillus niger ATCC 13496)
CAGCGGCGGCGGGAGGGGCCTACCTAATACCGCGCGAACGAGATTTTGTG
TCCAGATAGATCGATTCATAGTATCTTGGATTACTACACCTCATAGCGTT
ATCCCCGGAACACAGTCCTAAAAAGGTCCATTCTTATTTTTCTAAGTTCA
TCACAATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAG
CATGTTGTTTACTGTGGAGGTACGTCGTCTCTTCTCGTCTCTGATATCGC
TTTTGAAAGCGATGTTTTCTGAGGGAATTAAAATTTAACTGATCGTCTGA
TGTGAACAGTTTGCACATTGCCTCCGGAGGTACGCTTACATATATACATA
CGCCCTATGCACTCGATCTTAAGGCCCATCTTCATCTGCGAGGACGAAGC
CACTCTGCTCCTTCCAGCAATATATTATTTAGACCCTCCAAAGAGGGCAT
ATGGCAGCCAGCTAACCTCGAATCCGGAATCGTCTAGTACTGTGAATTCG
GTGGCACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGAC
ATGTACCAGTCGTTATATTCTGAGGGTTCGTTGTTATTTCCCTCTTCTTC
TCGGATTTCCCGGGTGTTCAGCTCAGCTCGCTAACTTACGGCCTATTTGT
CTTATGTAGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCT
CGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGC
GGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTA
AGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTG
GATATATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAA
GTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAA
TTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAG
GTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAA
GAAGAAGAAGAAGGCGACTGAAGCGCCCTGAGGTATTATCAATGGGCCGA
TGAATGCATAATGTACAAAAATGCTATGCTTGGGGGACAGTCTGGGTATC
ATGACATTATTTATGGTTTACACATTAGATCAACGGAGATACGACAGTCT
CGAGGCTGGCCTTGAAAATTGTCCTGAGTCTCGGTATTAG
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Coding sequence (CDS) from alignment at KZ851906.1:904721..905960+

>M747DRAFT_368550-T1 ID=M747DRAFT_368550-T1|Name=M747DRAFT_368550-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2376bp|location=Sequence derived from alignment at KZ851906.1:904721..905960+ (Aspergillus niger ATCC 13496)
ATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGT
TGTTTACTGTGGAGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTG
GCACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATG
TACCAGTCGTTATATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATT
GTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGG
CTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCT
AAGGTACAGATTAAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGT
TATCACGGGGTTGGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGG
ATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGT
GGAACTGAGGAAATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGA
ATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGC
TCATTGAGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCC
GAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTA
CTGTGGAGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGG
CCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAG
TCGTTATATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGT
ATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGG
CTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTA
CAGATTAAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCAC
GGGGTTGGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGG
GCAAGAAGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACT
GAGGAAATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCT
GCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTG
AGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCCGAAGTC
GCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGG
AGTTTGCACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGGCCAAGA
AATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTA
TATTCTGAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGC
TCGGGAGCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTG
CGGCTGAGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATT
AAGCGGGTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTT
GGATATATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGA
AGTTCGCTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAA
ATTACCGTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGA
GGTGTACGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATA
AGAAGAAGAAGAAGGCGACTGAAGCGCCCTGAATGGCCGAAGTCGCCCAA
CCGGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGTTTG
CACATTGCCTCCGGAGTACTGTGAATTCGGTGGCACGGCCAAGAAATGCG
AGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCT
GAGGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGA
GCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTG
AGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGG
GTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATAT
ATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCG
CTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACC
GTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTA
CGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGA
AGAAGAAGGCGACTGAAGCGCCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TMA22M747DRAFT_368550Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368550-T1M747DRAFT_368550-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368550-T1.utr5p1M747DRAFT_368550-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368550-T1.exon1M747DRAFT_368550-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_368550-T1.exon2M747DRAFT_368550-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_368550-T1.exon3M747DRAFT_368550-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_368550-T1.exon4M747DRAFT_368550-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368550-T1.cdsM747DRAFT_368550-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368550-T1.utr3p1M747DRAFT_368550-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092652NQ
DBxrefInterPro:IPR036877
DBxrefInterPro:IPR001950
DBxrefPFAM:PF01253
ProductTranslation machinery-associated protein 22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:904721..905960 +
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