You are here

Home

M747DRAFT_368799-T1, M747DRAFT_368799-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_368799-T1
Unique NameM747DRAFT_368799-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:760641..762791-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_368799-T1 ID=M747DRAFT_368799-T1|Name=M747DRAFT_368799-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2151bp|location=Sequence derived from alignment at KZ851907.1:760641..762791- (Aspergillus niger ATCC 13496)
TTGCCTGATAGGAGGGTTCCCGTCATGTCTGTCAATGGGGAATACTGAAA
TTGATATGTGTTCAACCTTGAGATCTTGTCAGCATCTCTAATGATCAACC
ACAAAGCCATCGCTCTTCCAGTTTAAAAATCGAGAATAGTTCGGATGGAG
CGGCAAACTAGCCCCTCAGATGACGCCCAGCGATGGCAGCCATCCTACCA
TTTCACTGCCCCCCACGGGTGGATGAATGACCCGTGCGGTCTAGGTTATG
ATCCTGCAACCGGTGTCTATCACCTGTCATTCCAGTGGAACCCGAAAGGC
AATGACTGGGGAAATATATCCTGGGGGCACGCTGTGTCTAATGATCTGCT
CCATTGGGAGGTTTATCCGGAGCCATGTCTGCAGCCCACCACCGAATATG
ACCGATGTGGCGTCTTTACGGGCTGCTTTCGACCCAATGCTGTAGATGGG
GCTCCGAATGCCCTGACTGCTATATACACATCAGTGAAGCGCCTTCCCAT
TCATTACACGCTGCCGTATGTGCCTGGCTCCGAATCGGTCAGTTTAGCCA
CTTCGCATGACCAGGGTTTGACATGGCAGCGTCTCGACTGCAACCCAATT
ATAGCACGCTCACCCCCAAATGTCAAAGTAGCAGGCTGGCGGGATCCTTT
TGTGGGTGCCTGGCAGTTCATGCGGGAACAGCCGGAAGCTTTTCCATCCT
CCGACCTCTGCGGTCTGATCTCCGGAGGTATCGCCGGACAGACCCCAACA
GCTTTTGTATATTCCATCAATCCTCACGACTTACGACAGTGGAAGTACCT
GGGGCCGCTGGTTGATGTTGGACTCAATTTCAACCCCTCCCGTTGGTCCA
GCGACTTGGGGGTCAACTGGGAAGTCGTCAACTGGATTCCCATGACAGAC
GACGAGGATGTTACTCGGTTGTTCATCCTCATGGGGGCTGAGGGAGGTCT
TGCATCTGACAAAAGCCAGAAAAAGTCACCTCGAGCACAGCTTTGGATGT
CAATCAAGCCGTGCTTTAGCACCCAACCGCATAGCAATACCGACCCTCTC
GCATCCTATGCATTTTCCGGGGTCTTTGATCACGGTTGCGGCTATGCGGC
AAATAGCTTTTGGGACCCGGTCACAGGCCAGCAGATAGTCTATTGCTGGA
TTACAGAAGATAACCTGCCAGATGACCTTAGGCACCAACAAGGATGGAGC
GGCATGTTGTCTATCCCACGAGTAGTGAAACTAATCACTCTGCGCCATGT
TAAGCGAGCCCGGCGTTCAGAGCTGAATGCTATCACCTCGATCGAAACAG
AAGAAGAGAGACAACAAACCTTCACCATCCGAACGCTGGGTGTTCTCCCA
GATCCACGACTTAAAGCTCTTCGCAGTAAGACGAACAGCATGCATATCGA
TCACCTGCCCCTAAGCAAATCCGACAATCGTATCTCTCCACCCAAAGCCC
ACTTTCCTATAACGACATCCAGATGGGAAGTCCATGCCAAATTCTCCGTC
AGTAACCAATGCGGGAGAGTAGGCATAGAAGTCCTCCATGGCACCAGTAT
GTTGTATTCATCTCCCCCACACTGGCACACATCGTAGACTTTCAGCTCTT
CCCCACTAACAGTCCACCAACACAAACCAGCCCTTTCAGACCCGCCGCGC
CGTACTCTTCTATACTGGGACCCAGCCAGCGAAACCTTCTGTATCCAACG
ACCAAGTCCGCATGACCCCCGCATCAATCATGAACTAGTGACCGCTGCCC
ATACGCTATTTACGTTTGAAACCCCATCCGGCGAACAAAAGGAAGAGGCG
CTACAGATCCACGCATTCTGGGATACGAGCGTGCTCGAAGTGTTTGTGAA
CGAGCGCACCGTCATCTCCACCCGCATCTATCTGCCACCTGACCAAGCGT
CCCAGTGTGCACTGCGTTTCTTCGCCGAGGGAGAGACCGACCATGATGAT
CCTCCGGCTGTGGTTCTACAGGCAGATAGTTGGGATGGATTGGGCCTCGA
CAAGCATGATTGTGTCTCGTTGATCGAGCAATTGAGAACGAGGAAGAAGT
CGATGCGCGAGTGAGATACCATGCTAGAATCAGAGAGTCATGACACATGA
CAGAGCAATTAGGCTAGATATTGGAAAATTAAGAATTATCGTAAAGTCGA
G
back to top

Coding sequence (CDS) from alignment at KZ851907.1:760641..762791-

>M747DRAFT_368799-T1 ID=M747DRAFT_368799-T1|Name=M747DRAFT_368799-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3672bp|location=Sequence derived from alignment at KZ851907.1:760641..762791- (Aspergillus niger ATCC 13496)
CCCTTTCAGACCCGCCGCGCCGTACTCTTCTATACTGGGACCCAGCCAGC
GAAACCTTCTGTATCCAACGACCAAGTCCGCATGACCCCCGCATCAATCA
TGAACTAGTGACCGCTGCCCATACGCTATTTACGTTTGAAACCCCATCCG
GCGAACAAAAGGAAGAGGCGCTACAGATCCACGCATTCTGGGATACGAGC
GTGCTCGAAGTGTTTGTGAACGAGCGCACCGTCATCTCCACCCGCATCTA
TCTGCCACCTGACCAAGCGTCCCAGTGTGCACTGCGTTTCTTCGCCGAGG
GAGAGACCGACCATGATGATCCTCCGGCTGTGGTTCTACAGGCAGATAGT
TGGGATGGATTGGGCCTCGACAAGCATGATTGTGTCTCGTTGATCGAGCA
ATTGAGAACGAGGAAGAAGTCGATGCGCGAGTGAATGGAGCGGCAAACTA
GCCCCTCAGATGACGCCCAGCGATGGCAGCCATCCTACCATTTCACTGCC
CCCCACGGGTGGATGAATGACCCGTGCGGTCTAGGTTATGATCCTGCAAC
CGGTGTCTATCACCTGTCATTCCAGTGGAACCCGAAAGGCAATGACTGGG
GAAATATATCCTGGGGGCACGCTGTGTCTAATGATCTGCTCCATTGGGAG
GTTTATCCGGAGCCATGTCTGCAGCCCACCACCGAATATGACCGATGTGG
CGTCTTTACGGGCTGCTTTCGACCCAATGCTGTAGATGGGGCTCCGAATG
CCCTGACTGCTATATACACATCAGTGAAGCGCCTTCCCATTCATTACACG
CTGCCGTATGTGCCTGGCTCCGAATCGGTCAGTTTAGCCACTTCGCATGA
CCAGGGTTTGACATGGCAGCGTCTCGACTGCAACCCAATTATAGCACGCT
CACCCCCAAATGTCAAAGTAGCAGGCTGGCGGGATCCTTTTGTGGGTGCC
TGGCAGTTCATGCGGGAACAGCCGGAAGCTTTTCCATCCTCCGACCTCTG
CGGTCTGATCTCCGGAGGTATCGCCGGACAGACCCCAACAGCTTTTGTAT
ATTCCATCAATCCTCACGACTTACGACAGTGGAAGTACCTGGGGCCGCTG
GTTGATGTTGGACTCAATTTCAACCCCTCCCGTTGGTCCAGCGACTTGGG
GGTCAACTGGGAAGTCGTCAACTGGATTCCCATGACAGACGACGAGGATG
TTACTCGGTTGTTCATCCTCATGGGGGCTGAGGGAGGTCTTGCATCTGAC
AAAAGCCAGAAAAAGTCACCTCGAGCACAGCTTTGGATGTCAATCAAGCC
GTGCTTTAGCACCCAACCGCATAGCAATACCGACCCTCTCGCATCCTATG
CATTTTCCGGGGTCTTTGATCACGGTTGCGGCTATGCGGCAAATAGCTTT
TGGGACCCGGTCACAGGCCAGCAGATAGTCTATTGCTGGATTACAGAAGA
TAACCTGCCAGATGACCTTAGGCACCAACAAGGATGGAGCGGCATGTTGT
CTATCCCACGAGTAGTGAAACTAATCACTCTGCGCCATGTTAAGCGAGCC
CGGCGTTCAGAGCTGAATGCTATCACCTCGATCGAAACAGAAGAAGAGAG
ACAACAAACCTTCACCATCCGAACGCTGGGTGTTCTCCCAGATCCACGAC
TTAAAGCTCTTCGCAGTAAGACGAACAGCATGCATATCGATCACCTGCCC
CTAAGCAAATCCGACAATCGTATCTCTCCACCCAAAGCCCACTTTCCTAT
AACGACATCCAGATGGGAAGTCCATGCCAAATTCTCCGTCAGTAACCAAT
GCGGGAGAGTAGGCATAGAAGTCCTCCATGGCACCACCCTTTCAGACCCG
CCGCGCCGTACTCTTCTATACTGGGACCCAGCCAGCGAAACCTTCTGTAT
CCAACGACCAAGTCCGCATGACCCCCGCATCAATCATGAACTAGTGACCG
CTGCCCATACGCTATTTACGTTTGAAACCCCATCCGGCGAACAAAAGGAA
GAGGCGCTACAGATCCACGCATTCTGGGATACGAGCGTGCTCGAAGTGTT
TGTGAACGAGCGCACCGTCATCTCCACCCGCATCTATCTGCCACCTGACC
AAGCGTCCCAGTGTGCACTGCGTTTCTTCGCCGAGGGAGAGACCGACCAT
GATGATCCTCCGGCTGTGGTTCTACAGGCAGATAGTTGGGATGGATTGGG
CCTCGACAAGCATGATTGTGTCTCGTTGATCGAGCAATTGAGAACGAGGA
AGAAGTCGATGCGCGAGTGAATGGAGCGGCAAACTAGCCCCTCAGATGAC
GCCCAGCGATGGCAGCCATCCTACCATTTCACTGCCCCCCACGGGTGGAT
GAATGACCCGTGCGGTCTAGGTTATGATCCTGCAACCGGTGTCTATCACC
TGTCATTCCAGTGGAACCCGAAAGGCAATGACTGGGGAAATATATCCTGG
GGGCACGCTGTGTCTAATGATCTGCTCCATTGGGAGGTTTATCCGGAGCC
ATGTCTGCAGCCCACCACCGAATATGACCGATGTGGCGTCTTTACGGGCT
GCTTTCGACCCAATGCTGTAGATGGGGCTCCGAATGCCCTGACTGCTATA
TACACATCAGTGAAGCGCCTTCCCATTCATTACACGCTGCCGTATGTGCC
TGGCTCCGAATCGGTCAGTTTAGCCACTTCGCATGACCAGGGTTTGACAT
GGCAGCGTCTCGACTGCAACCCAATTATAGCACGCTCACCCCCAAATGTC
AAAGTAGCAGGCTGGCGGGATCCTTTTGTGGGTGCCTGGCAGTTCATGCG
GGAACAGCCGGAAGCTTTTCCATCCTCCGACCTCTGCGGTCTGATCTCCG
GAGGTATCGCCGGACAGACCCCAACAGCTTTTGTATATTCCATCAATCCT
CACGACTTACGACAGTGGAAGTACCTGGGGCCGCTGGTTGATGTTGGACT
CAATTTCAACCCCTCCCGTTGGTCCAGCGACTTGGGGGTCAACTGGGAAG
TCGTCAACTGGATTCCCATGACAGACGACGAGGATGTTACTCGGTTGTTC
ATCCTCATGGGGGCTGAGGGAGGTCTTGCATCTGACAAAAGCCAGAAAAA
GTCACCTCGAGCACAGCTTTGGATGTCAATCAAGCCGTGCTTTAGCACCC
AACCGCATAGCAATACCGACCCTCTCGCATCCTATGCATTTTCCGGGGTC
TTTGATCACGGTTGCGGCTATGCGGCAAATAGCTTTTGGGACCCGGTCAC
AGGCCAGCAGATAGTCTATTGCTGGATTACAGAAGATAACCTGCCAGATG
ACCTTAGGCACCAACAAGGATGGAGCGGCATGTTGTCTATCCCACGAGTA
GTGAAACTAATCACTCTGCGCCATGTTAAGCGAGCCCGGCGTTCAGAGCT
GAATGCTATCACCTCGATCGAAACAGAAGAAGAGAGACAACAAACCTTCA
CCATCCGAACGCTGGGTGTTCTCCCAGATCCACGACTTAAAGCTCTTCGC
AGTAAGACGAACAGCATGCATATCGATCACCTGCCCCTAAGCAAATCCGA
CAATCGTATCTCTCCACCCAAAGCCCACTTTCCTATAACGACATCCAGAT
GGGAAGTCCATGCCAAATTCTCCGTCAGTAACCAATGCGGGAGAGTAGGC
ATAGAAGTCCTCCATGGCACCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_368799M747DRAFT_368799Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368799-T1M747DRAFT_368799-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368799-T1.cdsM747DRAFT_368799-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368799-T1.utr3p1M747DRAFT_368799-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368799-T1.exon2M747DRAFT_368799-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_368799-T1.exon1M747DRAFT_368799-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_368799-T1.utr5p1M747DRAFT_368799-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteCAZy:GH32
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR013148
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR013189
DBxrefInterPro:IPR001362
DBxrefPFAM:PF00251
DBxrefPFAM:PF08244
Productglycosyl hydrolase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:760641..762791 -
Powered by Drupal