You are here

Home

M747DRAFT_369243-T1, M747DRAFT_369243-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_369243-T1
Unique NameM747DRAFT_369243-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:598037..599303-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_369243-T1 ID=M747DRAFT_369243-T1|Name=M747DRAFT_369243-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1267bp|location=Sequence derived from alignment at KZ851909.1:598037..599303- (Aspergillus niger ATCC 13496)
ATGTCTCTCAGTATAGACGCATACACCCCCACCGAAGTAATCAACCTCGT
CGCCTGAGCAGGCATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTCC
TCAGCTCCGTCTCCGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGCC
CTCAGCACAAACACAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGAT
TCGCACCATTAGCGCGCTGGTCTTTCCGTATGGATTGTGCATGATTATCT
TAACCGGGGCGGATTTGTGCACAGGGTCATTTATGGTATACCCCCCTCCC
CTTTACTCCACTCCAACTGTGGATAATGTAGTACTAATATACCCAGTTCA
CAACGGTCGCAGCCCTACAGCGCCAACTCCCCTGGTGGAAGATGCTCCTC
CACTGGTTCATCACATTTTGGGGAAACCTATGTGGATCGCTATTTGTCGT
GGCGATTATCTTCGGCTGTATTCTCTCCCCCCTTCTCCACACCCACACCC
TAACCTAAAATCCTAACAATTGCACAGACGGCGAAGTTTTCTCCACAGAC
CCCTACAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGTCACTCC
GCACTTCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTGGCTCGTTT
GTCTCGCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCTAAGATC
ATGGGCATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGATTCGATCA
CGTCGTCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCTGGATGCGC
CGGACATTACGGTGGGGTTGTACGTGTGGAAGGGGATTATCCCGACGTTG
TTGGGGAATATTGTCGGGGGTGGGCTTTTTGTAGGAACGTACTACTGGTA
CATGTATCTCTTGCAAGGGGAGAGTATCACTGTAGCTGGGTTGCGCAGAC
AGGGCATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGTGGGAAG
GATGATGTTGAGGCGACTGCCGGGGCGATTTAGTTCGTGAGTGAGCAATC
CCCTTGCGTAGGGGGTATATGATGTGTCAGATGAATGGTTGTGATGGTAC
TGGTGGTGTTGATAACAATAGTAATTGCTAATTCTATAAGCTTATGTGTC
TGCCTTACGGGCACATCAGGGATTGACCAATCAGTGTAAGGTCAATATAC
GCCAGGGCCAATCTTAGCCCGCATCGTATACTTGCTAGCTATGTAGTATC
CTTGCTGGTGATCAGGC
back to top

Coding sequence (CDS) from alignment at KZ851909.1:598037..599303-

>M747DRAFT_369243-T1 ID=M747DRAFT_369243-T1|Name=M747DRAFT_369243-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3444bp|location=Sequence derived from alignment at KZ851909.1:598037..599303- (Aspergillus niger ATCC 13496)
ACGGCGAAGTTTTCTCCACAGACCCCTACAAAAGCGAAGTCATCTCCTTC
GCCACCAAAAAGCAAGTCACTCCGCACTTCCAACAAATCTTCCTCCGCGG
CATCGGATGCAACTGGCTCGTTTGTCTCGCCTGTTTCTTCGGTCTACAGG
GTCGTGACCTCGCGTCTAAGATCATGGGCATCTGGTGGCCGATCTTCGCG
TTCGTATCGCTGGGATTCGATCACGTCGTCGCGAACATGACCTTCATTCC
GCTGGCTATCTGGCTGGATGCGCCGGACATTACGGTGGGGTTGTACGTGT
GGAAGGGGATTATCCCGACGTTGTTGGGGAATATTGTCGGGGGTGGGCTT
TTTGTAGGAACGTACTACTGGTACATGTATCTCTTGCAAGGGGAGAGTAT
CACTGTAGCTGGGTTGCGCAGACAGGGCATGGCTACTTCGGCGACAGCGA
CGCCGGCCACGGCGGGTGGGAAGGATGATGTTGAGGCGACTGCCGGGGCG
ATTTAGTTCACAACGGTCGCAGCCCTACAGCGCCAACTCCCCTGGTGGAA
GATGCTCCTCCACTGGTTCATCACATTTTGGGGAAACCTATGTGGATCGC
TATTTGTCGTGGCGATTATCTTCGGCTGCATTGCCAAAGGCAATACCCGC
CTCGACAAAGTCTTCCTCAGCTCCGTCTCCGCAGGATGTCTACTTGCCTT
GGCGTGCGGAACCGCCCTCAGCACAAACACAAGTACCTGGTTCCAGGAGA
ATGCGCCGGGGTTGATTCGCACCATTAGCGCGCTGGTCTTTCCGTATGGA
TTGTGCATGATTATCTTAACCGGGGCGGATTTGTGCACAGGGTCATTTAT
GATGTCTCTCAACGGCGAAGTTTTCTCCACAGACCCCTACAAAAGCGAAG
TCATCTCCTTCGCCACCAAAAAGCAAGTCACTCCGCACTTCCAACAAATC
TTCCTCCGCGGCATCGGATGCAACTGGCTCGTTTGTCTCGCCTGTTTCTT
CGGTCTACAGGGTCGTGACCTCGCGTCTAAGATCATGGGCATCTGGTGGC
CGATCTTCGCGTTCGTATCGCTGGGATTCGATCACGTCGTCGCGAACATG
ACCTTCATTCCGCTGGCTATCTGGCTGGATGCGCCGGACATTACGGTGGG
GTTGTACGTGTGGAAGGGGATTATCCCGACGTTGTTGGGGAATATTGTCG
GGGGTGGGCTTTTTGTAGGAACGTACTACTGGTACATGTATCTCTTGCAA
GGGGAGAGTATCACTGTAGCTGGGTTGCGCAGACAGGGCATGGCTACTTC
GGCGACAGCGACGCCGGCCACGGCGGGTGGGAAGGATGATGTTGAGGCGA
CTGCCGGGGCGATTTAGTTCACAACGGTCGCAGCCCTACAGCGCCAACTC
CCCTGGTGGAAGATGCTCCTCCACTGGTTCATCACATTTTGGGGAAACCT
ATGTGGATCGCTATTTGTCGTGGCGATTATCTTCGGCTGCATTGCCAAAG
GCAATACCCGCCTCGACAAAGTCTTCCTCAGCTCCGTCTCCGCAGGATGT
CTACTTGCCTTGGCGTGCGGAACCGCCCTCAGCACAAACACAAGTACCTG
GTTCCAGGAGAATGCGCCGGGGTTGATTCGCACCATTAGCGCGCTGGTCT
TTCCGTATGGATTGTGCATGATTATCTTAACCGGGGCGGATTTGTGCACA
GGGTCATTTATGATGTCTCTCAACGGCGAAGTTTTCTCCACAGACCCCTA
CAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGTCACTCCGCACT
TCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTGGCTCGTTTGTCTC
GCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCTAAGATCATGGG
CATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGATTCGATCACGTCG
TCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCTGGATGCGCCGGAC
ATTACGGTGGGGTTGTACGTGTGGAAGGGGATTATCCCGACGTTGTTGGG
GAATATTGTCGGGGGTGGGCTTTTTGTAGGAACGTACTACTGGTACATGT
ATCTCTTGCAAGGGGAGAGTATCACTGTAGCTGGGTTGCGCAGACAGGGC
ATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGTGGGAAGGATGA
TGTTGAGGCGACTGCCGGGGCGATTTAGTTCACAACGGTCGCAGCCCTAC
AGCGCCAACTCCCCTGGTGGAAGATGCTCCTCCACTGGTTCATCACATTT
TGGGGAAACCTATGTGGATCGCTATTTGTCGTGGCGATTATCTTCGGCTG
CATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTCCTCAGCTCCGTCT
CCGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGCCCTCAGCACAAAC
ACAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGATTCGCACCATTAG
CGCGCTGGTCTTTCCGTATGGATTGTGCATGATTATCTTAACCGGGGCGG
ATTTGTGCACAGGGTCATTTATGATGTCTCTCAACGGCGAAGTTTTCTCC
ACAGACCCCTACAAAAGCGAAGTCATCTCCTTCGCCACCAAAAAGCAAGT
CACTCCGCACTTCCAACAAATCTTCCTCCGCGGCATCGGATGCAACTGGC
TCGTTTGTCTCGCCTGTTTCTTCGGTCTACAGGGTCGTGACCTCGCGTCT
AAGATCATGGGCATCTGGTGGCCGATCTTCGCGTTCGTATCGCTGGGATT
CGATCACGTCGTCGCGAACATGACCTTCATTCCGCTGGCTATCTGGCTGG
ATGCGCCGGACATTACGGTGGGGTTGTACGTGTGGAAGGGGATTATCCCG
ACGTTGTTGGGGAATATTGTCGGGGGTGGGCTTTTTGTAGGAACGTACTA
CTGGTACATGTATCTCTTGCAAGGGGAGAGTATCACTGTAGCTGGGTTGC
GCAGACAGGGCATGGCTACTTCGGCGACAGCGACGCCGGCCACGGCGGGT
GGGAAGGATGATGTTGAGGCGACTGCCGGGGCGATTTAGTTCACAACGGT
CGCAGCCCTACAGCGCCAACTCCCCTGGTGGAAGATGCTCCTCCACTGGT
TCATCACATTTTGGGGAAACCTATGTGGATCGCTATTTGTCGTGGCGATT
ATCTTCGGCTGCATTGCCAAAGGCAATACCCGCCTCGACAAAGTCTTCCT
CAGCTCCGTCTCCGCAGGATGTCTACTTGCCTTGGCGTGCGGAACCGCCC
TCAGCACAAACACAAGTACCTGGTTCCAGGAGAATGCGCCGGGGTTGATT
CGCACCATTAGCGCGCTGGTCTTTCCGTATGGATTGTGCATGATTATCTT
AACCGGGGCGGATTTGTGCACAGGGTCATTTATGATGTCTCTCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_369243M747DRAFT_369243Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369243-T1M747DRAFT_369243-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369243-T1.cdsM747DRAFT_369243-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369243-T1.utr3p1M747DRAFT_369243-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369243-T1.exon4M747DRAFT_369243-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_369243-T1.exon3M747DRAFT_369243-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_369243-T1.exon2M747DRAFT_369243-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_369243-T1.exon1M747DRAFT_369243-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR024002
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000292
DBxrefPFAM:PF01226
Productformate/nitrate family transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:598037..599303 -
Powered by Drupal