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M747DRAFT_369355-T1, M747DRAFT_369355-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_369355-T1
Unique NameM747DRAFT_369355-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:95534..97329+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_369355-T1 ID=M747DRAFT_369355-T1|Name=M747DRAFT_369355-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1796bp|location=Sequence derived from alignment at KZ851910.1:95534..97329+ (Aspergillus niger ATCC 13496)
CCCCATCAACCCCTCTGCCCATCAAGAACACTACTTCCACCCACAATTAC
CTACCTATTCCGAGTGCCATATCTCACATCAATCTCACAGTCAACTTCTA
GGCACCTCACCAACCCACCCATGGCTTCCCAAAAAATCACCTCCGCCCTC
GCGGAGATCGAATCCTCCGCGAACCCCCAAAACAAGCTGCAGCTCTACAA
CAACCTCCTCAGCGACATCGTATCGACGTCCACAGAACCCCAGATTTCTA
GAGACCTAATTTACTTTCTTGACTCCGTCCTCAGCGAAGACATCAGCATC
GTCGCCGCCCGCCCCATCCTCGACTCCTTCATCGTCGTCCTCCGCAAACT
CACCCAAGAAACCCAAATCAGCGTCGGCCAACACGCCATCACCCTCCTCC
AATCCCGATCCACCTCTGTCGAAGAACAAGACGCGCAGATCCGCGAGCTC
CTCGCAGATGCCTACGAAGCCGAAGGCCAGTACACCGACGCCGCAAAAGC
CCTGCAGGGCATCCACATCGACAGTTCGCAGCGTCTGGTCTCCGACGCAG
CCAAGGTGCGGCTATGGATCCGGATTGTGAGATACTACCTCGAGGAAGAC
GATACCACAAGTGCGGAGGCTTTCTTGAACCGCATCAAGAACCTACCGAG
TAAGATCGAGGATCATGAGTTGAAGCTACATTTCAAGCTATCCCAGGCTC
GTATATTGGATGCTCGCCGACGCTTTCTCGATGCTAGTCAGGAATACTTC
AATGTTAGCCTTGCGGCGGGAGTGGATGAAGCGGATCGATTGCAGGCCTT
GGCGGCTGCTATTCGGTGTGCGGTGCTCGCTCCGGCCGGGCCGCAGCGGT
CTCGGATCCTCGCGACGTTGTATAAGGATGATCGGTCGACGTCGGTGGAT
GAGTTTGCTATCCTGGAGAAAATGTTCCTGGATCGGTTGCTGACTCCAGA
GGAGGTGGCTGCGTTCGCGCAGCGGTTGGCGCCGCATCAGTTGGCTGTGA
CGGCTGATGGGTCTACGGTGCTTGATAAGGCTGTTGTTGAACACAATTTG
GTTGCGGCCAGCAAACTTTACGAAAATATTACGACTGATGCGTTGGGTGC
GATCCTGGGGCTTCAAGGGAGCGGGGACTTCACGGCGGGGGAGAAGGCGG
AAGATTATGCGGCGAGGATGGTCGAGCAGGGTCGATTGAAGGGGAGTATT
GATCAGATTGACGGGATAATATACTTCGATGGAGGAAATGCGACTACAGG
ACAGCATATCCGGCAGTGGGATGCTGGGGTGCAGGGTTTGGCCGAGGACG
TGGAGAGAGTGGCTACCAGCATTACCAATGCGTTTCCAGTGAGTACTATC
ATTTCAGTACAATTGTGGTCTACAGTGAGCTAACATAAGAGTAGGAATTC
GCAGCTGGACAGCCAGCAGTGCATTGAGGGTATGGAACGATACACCATGA
ATCGGAAATTAGCTAGCGACATGTTTGTTTCACAGGCGTAACGAGAATAA
GTTGCGCAGAATGCATGATAAATGATACCATGTGAGTGATGGTCATTAGA
AGCGTATGTCATATCGTGCGTCCAATGTACGTGGGTGAAGATCAGGAGCT
GTATTTCTGTATCGAGGGCAGTGCGTGGAGATACCCCGATAAAGTAAGTT
GGCCATATCTCAAGCCAAAGTGGCATCCAAGTCTGTGTACCCACGGGATG
CCGAAGTGTCCCTCTGTGTGTATGCAGAGAAACAAATCTATCTGCTGTGG
CAGGTAGTAGGATGCGCACGCGCAGGGATACAGCTGCCATATAGCC
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Coding sequence (CDS) from alignment at KZ851910.1:95534..97329+

>M747DRAFT_369355-T1 ID=M747DRAFT_369355-T1|Name=M747DRAFT_369355-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2502bp|location=Sequence derived from alignment at KZ851910.1:95534..97329+ (Aspergillus niger ATCC 13496)
ATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCGC
GAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATCG
TATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCTT
GACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCCT
CGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATCA
GCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGTC
GAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAGC
CGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATCG
ACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGATC
CGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGGC
TTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAGT
TGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCGA
CGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGGG
AGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTG
CGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTG
TATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGAA
AATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGC
AGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGTG
CTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAACTTTA
CGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGA
GCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGATG
GTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAAT
ATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGGG
ATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGC
ATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATTG
AATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCG
CGAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATC
GTATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCT
TGACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCC
TCGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATC
AGCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGT
CGAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAG
CCGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATC
GACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGAT
CCGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGG
CTTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAG
TTGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCG
ACGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGG
GAGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGT
GCGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTT
GTATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGA
AAATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCG
CAGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGT
GCTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAACTTT
ACGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGG
AGCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGAT
GGTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAA
TATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGG
GATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAG
CATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_369355M747DRAFT_369355Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369355-T1.utr5p1M747DRAFT_369355-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369355-T1.exon1M747DRAFT_369355-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_369355-T1.exon2M747DRAFT_369355-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369355-T1.cdsM747DRAFT_369355-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369355-T1.utr3p1M747DRAFT_369355-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369355-T1M747DRAFT_369355-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR019585
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR000717
DBxrefPFAM:PF10602
DBxrefPFAM:PF01399
ProductCOP9 signalosome complex subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:95534..97329 +
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