You are here

Home

M747DRAFT_369415-T1, M747DRAFT_369415-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_369415-T1
Unique NameM747DRAFT_369415-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:363952..365188+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_369415-T1 ID=M747DRAFT_369415-T1|Name=M747DRAFT_369415-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1237bp|location=Sequence derived from alignment at KZ851910.1:363952..365188+ (Aspergillus niger ATCC 13496)
ATCATATTAGCTGTCTCTGAGTTGGAATCGAAATACTCTGATTTGGGAAA
GTTTGTTCAAATTATAAGTCAAAATGACCACCCAAACCTCGCAAACAGTC
TACCACTACCTCGACATCGGCCGCCTAGGCCGCGGTGAAGTCGTCAGGTC
AGCAGCCAGCATCCATCTCCCCAACCCCGCATCCGAAACCAGCAATATCC
ACTAACCACAGAGTATCTTATTTATATGGAAATAGGCTCTTCCTCAAAGA
CGCCGGTATCGAATTCACCGAAGTCCGCTACCCGTACGATGATACCTGGC
CCCAGGTTAGCAAAAAGCTGCAGGAGCAGGGTATCAGTCGAACCGGGCTG
GTTCCTGCGCTCGAGTACAAGGGGAAGATTCTGACGCAGGTGCGCATTCC
CTTATACTCAACGAGTCCATTCTCCATGCACGACGACCTAATATGAATCC
AGCACATCCCCATTCTCCGCTACCTATCGCGCGACCTCGGCCGCTACGAC
GGCGAGACTAACTGGGAGAAGTACATCGTTGATGTGGTGGCTGATATTTA
TATCGATTGGAGGGTTAGTATATCCTCTCCCCTCCTATCATCTCCTCTAT
TCATCAGTACTCACCATAATGTAGAGCGAATGGGTCTCCAATTTCATGCA
AGCATCCGAGAAATACAAAAACGAGACCACGGCCAAGTACTACGATCTCG
TAGGAAAGTATTACGCCGAAACGGAGGGTCCGTATCTTCTAGGCGATAAG
GTCACGTATGCGGATTTTGCCGTCTATCAGAGTATGGATAATGATCGGAG
GACGGGGACTATTGTGGTATGTTTTATTCCTTAGTTTCTTTCATATTTTA
GGAAGAATGTGGTGCCTCGGGGTATTTGTGTCTTTGCTAACAGTTCTTGT
TCTTGGGGTAGGCGGATCTTCCTGAGTCGCTGGCCAGGCTTAGGGATGCT
TTTGAGAAGAGGGAGAATATTGCAGCGTATATTGAGGAGACGAAGTAGAG
ATGGTATTTTTCATAAAATCAATATGATTGTGAAGTGCTCCGTGGCGAGG
CGGGAGGCTGGTTGTAATCTACGTCTATGGGATTACTTGTCCAGGTTGAT
GCGGCGTGATTGATGCGGACATGGACGCAGGGTCTGTTATCAAACCTACA
AGGAATCCCCCCAAAGCTTTGAGAGCCGTCATATGTACTTACTGCAGCAC
TACTATAACATCACCATCTATCATAACTCATATCCAC
back to top

Coding sequence (CDS) from alignment at KZ851910.1:363952..365188+

>M747DRAFT_369415-T1 ID=M747DRAFT_369415-T1|Name=M747DRAFT_369415-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3090bp|location=Sequence derived from alignment at KZ851910.1:363952..365188+ (Aspergillus niger ATCC 13496)
ATGACCACCCAAACCTCGCAAACAGTCTACCACTACCTCGACATCGGCCG
CCTAGGCCGCGGTGAAGTCGTCAGGCTCTTCCTCAAAGACGCCGGTATCG
AATTCACCGAAGTCCGCTACCCGTACGATGATACCTGGCCCCAGGTTAGC
AAAAAGCTGCAGGAGCAGGGTATCAGTCGAACCGGGCTGGTTCCTGCGCT
CGAGTACAAGGGGAAGATTCTGACGCAGCACATCCCCATTCTCCGCTACC
TATCGCGCGACCTCGGCCGCTACGACGGCGAGACTAACTGGGAGAAGTAC
ATCGTTGATGTGGTGGCTGATATTTATATCGATTGGAGGAGCGAATGGGT
CTCCAATTTCATGCAAGCATCCGAGAAATACAAAAACGAGACCACGGCCA
AGTACTACGATCTCGTAGGAAAGTATTACGCCGAAACGGAGGGTCCGTAT
CTTCTAGGCGATAAGGTCACGTATGCGGATTTTGCCGTCTATCAGAGTAT
GGATAATGATCGGAGGACGGGGACTATTGTGGCGGATCTTCCTGAGTCGC
TGGCCAGGCTTAGGGATGCTTTTGAGAAGAGGGAGAATATTGCAGCGTAT
ATTGAGGAGACGAAGTAGATGACCACCCAAACCTCGCAAACAGTCTACCA
CTACCTCGACATCGGCCGCCTAGGCCGCGGTGAAGTCGTCAGGCTCTTCC
TCAAAGACGCCGGTATCGAATTCACCGAAGTCCGCTACCCGTACGATGAT
ACCTGGCCCCAGGTTAGCAAAAAGCTGCAGGAGCAGGGTATCAGTCGAAC
CGGGCTGGTTCCTGCGCTCGAGTACAAGGGGAAGATTCTGACGCAGCACA
TCCCCATTCTCCGCTACCTATCGCGCGACCTCGGCCGCTACGACGGCGAG
ACTAACTGGGAGAAGTACATCGTTGATGTGGTGGCTGATATTTATATCGA
TTGGAGGAGCGAATGGGTCTCCAATTTCATGCAAGCATCCGAGAAATACA
AAAACGAGACCACGGCCAAGTACTACGATCTCGTAGGAAAGTATTACGCC
GAAACGGAGGGTCCGTATCTTCTAGGCGATAAGGTCACGTATGCGGATTT
TGCCGTCTATCAGAGTATGGATAATGATCGGAGGACGGGGACTATTGTGG
CGGATCTTCCTGAGTCGCTGGCCAGGCTTAGGGATGCTTTTGAGAAGAGG
GAGAATATTGCAGCGTATATTGAGGAGACGAAGTAGATGACCACCCAAAC
CTCGCAAACAGTCTACCACTACCTCGACATCGGCCGCCTAGGCCGCGGTG
AAGTCGTCAGGCTCTTCCTCAAAGACGCCGGTATCGAATTCACCGAAGTC
CGCTACCCGTACGATGATACCTGGCCCCAGGTTAGCAAAAAGCTGCAGGA
GCAGGGTATCAGTCGAACCGGGCTGGTTCCTGCGCTCGAGTACAAGGGGA
AGATTCTGACGCAGCACATCCCCATTCTCCGCTACCTATCGCGCGACCTC
GGCCGCTACGACGGCGAGACTAACTGGGAGAAGTACATCGTTGATGTGGT
GGCTGATATTTATATCGATTGGAGGAGCGAATGGGTCTCCAATTTCATGC
AAGCATCCGAGAAATACAAAAACGAGACCACGGCCAAGTACTACGATCTC
GTAGGAAAGTATTACGCCGAAACGGAGGGTCCGTATCTTCTAGGCGATAA
GGTCACGTATGCGGATTTTGCCGTCTATCAGAGTATGGATAATGATCGGA
GGACGGGGACTATTGTGGCGGATCTTCCTGAGTCGCTGGCCAGGCTTAGG
GATGCTTTTGAGAAGAGGGAGAATATTGCAGCGTATATTGAGGAGACGAA
GTAGATGACCACCCAAACCTCGCAAACAGTCTACCACTACCTCGACATCG
GCCGCCTAGGCCGCGGTGAAGTCGTCAGGCTCTTCCTCAAAGACGCCGGT
ATCGAATTCACCGAAGTCCGCTACCCGTACGATGATACCTGGCCCCAGGT
TAGCAAAAAGCTGCAGGAGCAGGGTATCAGTCGAACCGGGCTGGTTCCTG
CGCTCGAGTACAAGGGGAAGATTCTGACGCAGCACATCCCCATTCTCCGC
TACCTATCGCGCGACCTCGGCCGCTACGACGGCGAGACTAACTGGGAGAA
GTACATCGTTGATGTGGTGGCTGATATTTATATCGATTGGAGGAGCGAAT
GGGTCTCCAATTTCATGCAAGCATCCGAGAAATACAAAAACGAGACCACG
GCCAAGTACTACGATCTCGTAGGAAAGTATTACGCCGAAACGGAGGGTCC
GTATCTTCTAGGCGATAAGGTCACGTATGCGGATTTTGCCGTCTATCAGA
GTATGGATAATGATCGGAGGACGGGGACTATTGTGGCGGATCTTCCTGAG
TCGCTGGCCAGGCTTAGGGATGCTTTTGAGAAGAGGGAGAATATTGCAGC
GTATATTGAGGAGACGAAGTAGATGACCACCCAAACCTCGCAAACAGTCT
ACCACTACCTCGACATCGGCCGCCTAGGCCGCGGTGAAGTCGTCAGGCTC
TTCCTCAAAGACGCCGGTATCGAATTCACCGAAGTCCGCTACCCGTACGA
TGATACCTGGCCCCAGGTTAGCAAAAAGCTGCAGGAGCAGGGTATCAGTC
GAACCGGGCTGGTTCCTGCGCTCGAGTACAAGGGGAAGATTCTGACGCAG
CACATCCCCATTCTCCGCTACCTATCGCGCGACCTCGGCCGCTACGACGG
CGAGACTAACTGGGAGAAGTACATCGTTGATGTGGTGGCTGATATTTATA
TCGATTGGAGGAGCGAATGGGTCTCCAATTTCATGCAAGCATCCGAGAAA
TACAAAAACGAGACCACGGCCAAGTACTACGATCTCGTAGGAAAGTATTA
CGCCGAAACGGAGGGTCCGTATCTTCTAGGCGATAAGGTCACGTATGCGG
ATTTTGCCGTCTATCAGAGTATGGATAATGATCGGAGGACGGGGACTATT
GTGGCGGATCTTCCTGAGTCGCTGGCCAGGCTTAGGGATGCTTTTGAGAA
GAGGGAGAATATTGCAGCGTATATTGAGGAGACGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_369415M747DRAFT_369415Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369415-T1M747DRAFT_369415-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369415-T1.utr5p1M747DRAFT_369415-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369415-T1.exon1M747DRAFT_369415-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_369415-T1.exon2M747DRAFT_369415-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_369415-T1.exon3M747DRAFT_369415-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_369415-T1.exon4M747DRAFT_369415-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_369415-T1.exon5M747DRAFT_369415-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369415-T1.cdsM747DRAFT_369415-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369415-T1.utr3p1M747DRAFT_369415-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
Productglutathione S-transferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:363952..365188 +
Powered by Drupal