You are here

Home

M747DRAFT_369683-T1, M747DRAFT_369683-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_369683-T1
Unique NameM747DRAFT_369683-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:443992..446776+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_369683-T1 ID=M747DRAFT_369683-T1|Name=M747DRAFT_369683-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2785bp|location=Sequence derived from alignment at KZ851911.1:443992..446776+ (Aspergillus niger ATCC 13496)
CCCTCACTTGCCGCTGCGTTGCTCTGCCTTTCATTGTTCGCTTCCTCTTC
TTCTTCTTCTACCTCCCTCCCCCCCACCTTCTCCTTATTCTTCTTTTAGA
CCAGTCCCTTTTCTATATACCAGGGACTTTGCTTGGTGTTTGTCTTGTTG
TCGTTCTCTTAGCGTCTTCCCCACATACACCATGGCCGACCAGACCCCCG
ATTCCTGGGAGGATGAGCTCTCCAGACAGACTGAGGGCGTCCGTCTGAAC
CCCAACGCACAAGGCCGCCCTCAGCCTCAGGCTCCTTCTTTCCACCCTGG
TGCTGCCACTTTCACCCCCGGCGCTGCTTCCTTCGTCCCTGGACAGGCCT
ACCAGCCCTACGGCGGCGGTTTCCCGCAATATGGCCAGTACGGCCAGCAG
GCTTACGGTGGATACCCTTATGACCAGCAGCAGCAGGCCTATGCCCAATA
CGGCGCCTACGCTCAGCAACCTGGTGGCTTTAACAACAACCAGATCTACA
ACCAGCAATACGGTGGTTACCAGCAGCAGCAACAGCAGCCCCGTCAAGCT
GCCGCCCCCGCTGCCGCCCAGCCCGCTCAGCCCGCCCCGAAGCCTGCCGC
AAGCAACGCTGCTCCCCCCAAGGCCAAGGTCCTGTCTATTGGCGGCGCCA
GCAACTCCCCCGCCGCTCCCAAGACCAAGGTTCTTTCCATCGGCACCCCC
TCCCCCGCTCCCACCTCGAGCACGCCTTCTTCGACCTCCGGTGCCGCTAC
GCCTGGAGATACCAAGGGTGCTGCCGCTGTTGAGGCGGCCGCTAAGGTGA
CGGCTTCCAAGGCCATCGAGAAGACTGAGAAGAAGGCCGACGCGAAGGCT
GCCGCCAGCGGCAAGTCGTCCCCTACCCCCTCGGGTCGCTCCAGCCCCGG
AAGATCCAGCCCTGCTCGCGGCGAGGCTGCCAAGGCTGCTCGTAACGCCG
ACGCCGTCGCCATGGAGCAACAAGCCGATGTCGATGAGGCTACTTTGAAG
GAAATCTACGGTGAGAAGAAGGAGCACGTCAACATTGTCTTCATCGGTCA
CGTCGATGCCGGAAAGTCTACTTTGGGTGGATCCATCCTTTACGTGACCG
GCATGGTGGACGAGCGTACTTTGGAGAAGTACAAGAGAGATGCCAAGGAG
GCTGGTCGTGAGACCTGGTACCTCTCTTGGGCCTTGGATTTGACCAACGA
GGAACGTGCCAAGGGTAAGACTGTTGAGGTTGGTCGTGCTCACTTCCAGC
TCCCCGTCAAGGGAGCCGACGGCAGCACCATCACGAGACATTTCTCCATC
CTGGATGCTCCTGGTCACAAGTCTTATGTTCACCACATGATCGGTGGTGC
TTCCCAGGCCGATGTTGGTGTCCTTGTCATCTCCGCGCGTAAGGGTGAAT
ACGAAACCGGTTTCGAGAAGGGTGGTCAGACTCGTGAGCACGCCCTGCTT
GCAAGAAACACCGGTGTGAAGACCCTTATCGTCGCTGTCAACAAGATGGA
CGACCCTACCGTTGAGTGGAGCAAGGCTCGTTTCGACGAGTGTACCGTCA
AGGTGGGCAAGTACTTGGAGAACCTCGGTTACAAGAAGAGCGATCTCTTC
TTCATGCCCATCTCTGCCCAGAGGACCACGGGTATCAAGGACCGCGTCCC
CACGGACCTTGCTCCCTGGTATGGCGGTCCCTCCCTTTTGGAGTTCCTGT
CGGAGATGAAGGTGCCCGAGCGTAAGATCAACGCACCTTTCATGATGCCC
ATCAGTGCCAAGTACCGTGACATGGGTACCATGGTCGAGGGTCGCATTGA
GTCTGGTGTGCTTAAGAAGAACGGCAGCTGCATCATGATGCCCAACCGCA
CCAAGGTCGAAATTGCCGCTCTCTATGGTGAGACTGAAGACGAAATCCCC
ACCGCTACCTGCGGTGACCAGGTCCGTCTTCGTCTCCGTGGTGTGGAAGA
AGAAGATATCTTGCCCGGATTCGTGCTCTGCTCCCCCAAGCGTCTGGTGA
ACTGTGTCAAGACTTTCGAGGCCAAGATCAGGATTCTTGACCTGAAGAGC
ATTCTCACGGCTGGTTACAACTGCGTGATGCACGTGCACTCTGCTGTCGA
AGAAGTTACTGTTGCAGCACTTCTGCACAAGTGCGAGCCCGGCACTGGAC
GTCGGAGCAAGCGCCCCCCTCCTTTCGCTAGCAAGGGTCAGACCATCATC
GCTCGTCTCGAGGTGACGAGCACTGCTGGTGCCGTTTGTGTCGAGCGCTT
TGAGGACTACAACCAGATGGGTCGGTTTACTCTGCGTGATCAGGTAAGCA
GTCATTTCCAAAGTGCCATTATTGAACAATGCTAACATACACAAAACCAG
GGTCAAACCGTTGCCATTGGTATGATTACCAAGCTCATCTCTGCCGAAGA
GGTGGCGCAGGCGCAGGCGTAAAGTGTGAATGTCTTTTCATTATAAATAG
CAGTCCCTACGGTGGTCGGTGGCGAGATCTAACGAGCTACGACTGTCGAC
CGGGAAGAATGGGCGGGAAAAGGCTCGGTGATGATATCCCAATAGCAGCC
TGGTTTGGTTGTTGCTGATGATGATGAATCTTGATGTTCCGTTTTATTCT
ATTTTGCTCCTTTCCTATAGATTTTGCATTCCCTTGCTTGTTGGTTTCGC
AATAAAATTTTCATTGCTGTCATCTCACGCATTCTACTATCTTTCAGTAT
TTGGATAGTCAAAGGGATTCACTGCGCGCATGAATCACACAGCTGTAGCA
TAGGCAAACAGCCAGAATACATGAACAAGGCGTCT
back to top

Coding sequence (CDS) from alignment at KZ851911.1:443992..446776+

>M747DRAFT_369683-T1 ID=M747DRAFT_369683-T1|Name=M747DRAFT_369683-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4368bp|location=Sequence derived from alignment at KZ851911.1:443992..446776+ (Aspergillus niger ATCC 13496)
ATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCTCCAGACAGAC
TGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCTCAGCCTCAGG
CTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCC
TTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTTTCCCGCAATA
TGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTATGACCAGCAGC
AGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACCTGGTGGCTTT
AACAACAACCAGATCTACAACCAGCAATACGGTGGTTACCAGCAGCAGCA
ACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGC
CCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTC
CTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGT
TCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTT
CGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGCTGCCGCTGTT
GAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGAAGACTGAGAA
GAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCT
CGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCC
AAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAACAAGCCGATGT
CGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAGGAGCACGTCA
ACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTACTTTGGGTGGA
TCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTTTGGAGAAGTA
CAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGG
CCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTT
GGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACGGCAGCACCAT
CACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAGTCTTATGTTC
ACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATC
TCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGGGTGGTCAGAC
TCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAGACCCTTATCG
TCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAGCAAGGCTCGT
TTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTA
CAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAGAGGACCACGG
GTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTATGGCGGTCCC
TCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAA
CGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGACATGGGTACCA
TGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGC
ATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTCTCTATGGTGA
GACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAGGTCCGTCTTC
GTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATTCGTGCTCTGC
TCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGGCCAAGATCAG
GATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAACTGCGTGATGC
ACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACTTCTGCACAAG
TGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAG
CAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTG
CCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGGTCGGTTTACT
CTGCGTGATCAGGGTCAAACCGTTGCCATTGGTATGATTACCAAGCTCAT
CTCTGCCGAAGAGGTGGCGCAGGCGCAGGCGTAAATGGCCGACCAGACCC
CCGATTCCTGGGAGGATGAGCTCTCCAGACAGACTGAGGGCGTCCGTCTG
AACCCCAACGCACAAGGCCGCCCTCAGCCTCAGGCTCCTTCTTTCCACCC
TGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCCTTCGTCCCTGGACAGG
CCTACCAGCCCTACGGCGGCGGTTTCCCGCAATATGGCCAGTACGGCCAG
CAGGCTTACGGTGGATACCCTTATGACCAGCAGCAGCAGGCCTATGCCCA
ATACGGCGCCTACGCTCAGCAACCTGGTGGCTTTAACAACAACCAGATCT
ACAACCAGCAATACGGTGGTTACCAGCAGCAGCAACAGCAGCCCCGTCAA
GCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGCCCGCCCCGAAGCCTGC
CGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTCCTGTCTATTGGCGGCG
CCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGTTCTTTCCATCGGCACC
CCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTTCGACCTCCGGTGCCGC
TACGCCTGGAGATACCAAGGGTGCTGCCGCTGTTGAGGCGGCCGCTAAGG
TGACGGCTTCCAAGGCCATCGAGAAGACTGAGAAGAAGGCCGACGCGAAG
GCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCTCGGGTCGCTCCAGCCC
CGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCCAAGGCTGCTCGTAACG
CCGACGCCGTCGCCATGGAGCAACAAGCCGATGTCGATGAGGCTACTTTG
AAGGAAATCTACGGTGAGAAGAAGGAGCACGTCAACATTGTCTTCATCGG
TCACGTCGATGCCGGAAAGTCTACTTTGGGTGGATCCATCCTTTACGTGA
CCGGCATGGTGGACGAGCGTACTTTGGAGAAGTACAAGAGAGATGCCAAG
GAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGGCCTTGGATTTGACCAA
CGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTTGGTCGTGCTCACTTCC
AGCTCCCCGTCAAGGGAGCCGACGGCAGCACCATCACGAGACATTTCTCC
ATCCTGGATGCTCCTGGTCACAAGTCTTATGTTCACCACATGATCGGTGG
TGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATCTCCGCGCGTAAGGGTG
AATACGAAACCGGTTTCGAGAAGGGTGGTCAGACTCGTGAGCACGCCCTG
CTTGCAAGAAACACCGGTGTGAAGACCCTTATCGTCGCTGTCAACAAGAT
GGACGACCCTACCGTTGAGTGGAGCAAGGCTCGTTTCGACGAGTGTACCG
TCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTACAAGAAGAGCGATCTC
TTCTTCATGCCCATCTCTGCCCAGAGGACCACGGGTATCAAGGACCGCGT
CCCCACGGACCTTGCTCCCTGGTATGGCGGTCCCTCCCTTTTGGAGTTCC
TGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAACGCACCTTTCATGATG
CCCATCAGTGCCAAGTACCGTGACATGGGTACCATGGTCGAGGGTCGCAT
TGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGCATCATGATGCCCAACC
GCACCAAGGTCGAAATTGCCGCTCTCTATGGTGAGACTGAAGACGAAATC
CCCACCGCTACCTGCGGTGACCAGGTCCGTCTTCGTCTCCGTGGTGTGGA
AGAAGAAGATATCTTGCCCGGATTCGTGCTCTGCTCCCCCAAGCGTCTGG
TGAACTGTGTCAAGACTTTCGAGGCCAAGATCAGGATTCTTGACCTGAAG
AGCATTCTCACGGCTGGTTACAACTGCGTGATGCACGTGCACTCTGCTGT
CGAAGAAGTTACTGTTGCAGCACTTCTGCACAAGTGCGAGCCCGGCACTG
GACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAGCAAGGGTCAGACCATC
ATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTGCCGTTTGTGTCGAGCG
CTTTGAGGACTACAACCAGATGGGTCGGTTTACTCTGCGTGATCAGGGTC
AAACCGTTGCCATTGGTATGATTACCAAGCTCATCTCTGCCGAAGAGGTG
GCGCAGGCGCAGGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUP35M747DRAFT_369683Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369683-T1.utr5p1M747DRAFT_369683-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369683-T1.exon1M747DRAFT_369683-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_369683-T1.exon2M747DRAFT_369683-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369683-T1.cdsM747DRAFT_369683-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369683-T1.utr3p1M747DRAFT_369683-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_369683-T1M747DRAFT_369683-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261PUF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR009001
DBxrefInterPro:IPR004160
DBxrefInterPro:IPR004161
DBxrefInterPro:IPR000795
DBxrefInterPro:IPR003285
DBxrefPFAM:PF03143
DBxrefPFAM:PF03144
DBxrefPFAM:PF00009
Producttranslation termination factor GTPase eRF3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:443992..446776 +
Powered by Drupal