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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851913.1:582375..583927+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_370163-T1 ID=M747DRAFT_370163-T1|Name=M747DRAFT_370163-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1553bp|location=Sequence derived from alignment at KZ851913.1:582375..583927+ (Aspergillus niger ATCC 13496)
GTCAACTTTGCGCCTGCTTTCCCTGCCAACTCCCCGGGCATCGCTTTGTC
CCGGCTTCTGCAGCGACCGTCCGACCTGGGATGCATTCTTGATCATGCCC
CTTCACGAGCCCGTCCGGTGATAGTTTCCTTTTAACGACTCCTCTACAAT
CGTCGTGGTGAAAATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAACG
AACTGGCCTCTCGACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGAT
CATCTGTTCTATCAGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAAA
TGATCTCGCCCTTCTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAGC
TCTTTCGGCTCCTCCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTATT
TCGCGCGATGATGCTGAAAAGTAGGATTATTCTTCTACCTATGAAATCAA
CATAGGAACTCTCACCCACTAACCCACCTGTTTAGACTTCGAGACCTAAG
CCCCGACGAGAGTCTGGTCTACAATGTCATCCATTCGACAGGACGGTCCG
GTATTTGGGTCCGCGCTATCGGCAACCGCACCAACCTTCACAAGTCCATA
CTCGATCGCTGCCTCAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGT
CCACAATGTCAAATTCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCG
CCCCAAGTGAAGACGTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTG
GACGAGAACTTCATCAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAG
CCGGAAGAGCTGGTACGAGGCCCCTTCCTCCTCGGACGGTCCTCGAAACA
AGCGCATGAAGACCGCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCT
CCGAAGGAATACCTCCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCAT
ACCTATGCTGACAGCTGCCGTGAACGAGAGTGGCATCACACCGGTCCGTC
TGGGCGAGGAGAGCATCACGCAGCTCCTGGAGATGCTCTGCTACGACAAC
AAGCTAGTATCTCTGAACAACGGCGAATTCTACAAATCCGTCAAGAACCC
CGAACAAGTCAAGTCTCAACAAGCGCGCAAGCCCCGGACCGATGACGCAG
GCATCGACGACAGGCTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGC
AACTGTCCGGTTTTCAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGA
GAGTTGCGAATACTTTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGAT
TCTCTCTTATTATCTACCTCACATCATTTCTACCTCACATACTCGTTACA
CCTTATATCACACAATTCCTGTATACAATTAGCGCAGCATGCGCCAGATG
ATGTTTGTTTGCATAGCGATGGCGTTCACGTCTGATATTGGGATCGGCCA
TGGAACACGGTCTTCTTTTCTCAATGTGGGCAACTAAAAACAAAAGAATT
TTCAAGGGCTTTTATTTTTTCTGGGAAAGAAAAAGGATGAAAAAGCGAAG
GGC back to topCoding sequence (CDS) from alignment at KZ851913.1:582375..583927+ >M747DRAFT_370163-T1 ID=M747DRAFT_370163-T1|Name=M747DRAFT_370163-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2142bp|location=Sequence derived from alignment at KZ851913.1:582375..583927+ (Aspergillus niger ATCC 13496)
ATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAACGAACTGGCCTCTCG
ACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGATCATCTGTTCTATC
AGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAAATGATCTCGCCCTT
CTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAGCTCTTTCGGCTCCT
CCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTATTTCGCGCGATGATG
CTGAAAAACTTCGAGACCTAAGCCCCGACGAGAGTCTGGTCTACAATGTC
ATCCATTCGACAGGACGGTCCGGTATTTGGGTCCGCGCTATCGGCAACCG
CACCAACCTTCACAAGTCCATACTCGATCGCTGCCTCAAGTCGCTGGAAT
CGAGAAGCTACATCAAGAGCGTCCACAATGTCAAATTCCCCAGCCGGAAG
ATGTACATGCTGGCGAACCTCGCCCCAAGTGAAGACGTGACTGGTGGAGC
CTGGTTTACCGACGGAGTTTTGGACGAGAACTTCATCAACAGCGTCGCCG
GCTTTATCGAATACTCCGTGAGCCGGAAGAGCTGGTACGAGGCCCCTTCC
TCCTCGGACGGTCCTCGAAACAAGCGCATGAAGACCGCGGATGGAAGCCT
AGCTGTCAAACAAGAGGGCGCTCCGAAGGAATACCTCCCCTTCCCAGCCG
GGTATCAGGGCTACCCCACCATACCTATGCTGACAGCTGCCGTGAACGAG
AGTGGCATCACACCGGTCCGTCTGGGCGAGGAGAGCATCACGCAGCTCCT
GGAGATGCTCTGCTACGACAACAAGCTAGTATCTCTGAACAACGGCGAAT
TCTACAAATCCGTCAAGAACCCCGAACAAGTCAAGTCTCAACAAGCGCGC
AAGCCCCGGACCGATGACGCAGGCATCGACGACAGGCTAGTCAAGAACGG
CATGACCGAAGCGCCCTGCGGCAACTGTCCGGTTTTCAAGCTCTGCGCTC
CCGGCGGGGCTGTCAGTCCCGAGAGTTGCGAATACTTTGACCCCTGGCTA
GAAAAGGCCCTCGGATTCTGAATGGCCTCCGCGGGGGCGTCAGGCAGTTC
GGTCAACGAACTGGCCTCTCGACTTTACGACGCCTGTCTTAACCAGTTCC
CTTCCGATCATCTGTTCTATCAGCAAGATCTCCTGGGTCTGAACATTGTC
CCCAAAAATGATCTCGCCCTTCTCTTGAACTGCACCCAGTCGCTCGTCGA
CCAGAAGCTCTTTCGGCTCCTCCAGGGCAAAAATGACCGCTTAGCCTGGA
AGATTATTTCGCGCGATGATGCTGAAAAACTTCGAGACCTAAGCCCCGAC
GAGAGTCTGGTCTACAATGTCATCCATTCGACAGGACGGTCCGGTATTTG
GGTCCGCGCTATCGGCAACCGCACCAACCTTCACAAGTCCATACTCGATC
GCTGCCTCAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGTCCACAAT
GTCAAATTCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCGCCCCAAG
TGAAGACGTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTGGACGAGA
ACTTCATCAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAGCCGGAAG
AGCTGGTACGAGGCCCCTTCCTCCTCGGACGGTCCTCGAAACAAGCGCAT
GAAGACCGCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCTCCGAAGG
AATACCTCCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCATACCTATG
CTGACAGCTGCCGTGAACGAGAGTGGCATCACACCGGTCCGTCTGGGCGA
GGAGAGCATCACGCAGCTCCTGGAGATGCTCTGCTACGACAACAAGCTAG
TATCTCTGAACAACGGCGAATTCTACAAATCCGTCAAGAACCCCGAACAA
GTCAAGTCTCAACAAGCGCGCAAGCCCCGGACCGATGACGCAGGCATCGA
CGACAGGCTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGCAACTGTC
CGGTTTTCAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGAGAGTTGC
GAATACTTTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005666 | RNA polymerase III complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006383 | transcription by RNA polymerase III |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646WF |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR007832 |
| DBxref | PFAM:PF05158 |
| Product | DNA-directed RNA polymerase III subunit Rpc34 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851913.1 | supercontig | KZ851913.1:582375..583927 + |
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