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M747DRAFT_370349-T1, M747DRAFT_370349-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370349-T1
Unique NameM747DRAFT_370349-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:480956..482391+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370349-T1 ID=M747DRAFT_370349-T1|Name=M747DRAFT_370349-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1436bp|location=Sequence derived from alignment at KZ851914.1:480956..482391+ (Aspergillus niger ATCC 13496)
TATCATTTCACCTCGGTATACCATCTCCTCCTTCAAGGACATATTGTTCA
TCATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCC
GGCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCA
CATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGC
TTCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAG
TGTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTG
GTTCGTAGAGAGAGTCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAAC
CATCTACATGCATCTGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACA
AAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCC
GGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCA
CAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATG
CATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATAC
GAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGA
GGAACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAA
CGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGA
AACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGC
CGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAG
AAGAACGTAAGCACTCCACCACCCCCATACCTAAAACCAAAACCAAAGTC
CATCACTAACCAAAACCACCCCACACAGTAATCGCCAGCCTCACCACTCG
CCTCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCT
ACGTCGCGAGCAACTCCACCTCCGATCCAGAAACCCCCACCTCAACAACA
ACCCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCT
CTCCCTTCTCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCG
CCCAGAGCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAG
AGCATCAGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAG
TGTCAGACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGA
ATCGGTTCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
GAGTGAGGTATCTGGTGTGAGATGGAGTTAATCAACATTAGTAGCTGATA
AGAGTCTTAACGAACCATGAATGCATGATCATACCC
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Coding sequence (CDS) from alignment at KZ851914.1:480956..482391+

>M747DRAFT_370349-T1 ID=M747DRAFT_370349-T1|Name=M747DRAFT_370349-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3492bp|location=Sequence derived from alignment at KZ851914.1:480956..482391+ (Aspergillus niger ATCC 13496)
ATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGG
CCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACA
TCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTT
CTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTG
TATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGT
TCGTAGAGAGAGTCAAGCAATTCAAAGATGTACACAAAGCTCCTGCCCTT
GACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCGT
CCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCCG
TGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGGC
GGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATGC
GACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTAA
CGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAACGGGGGAAGCCGAG
ATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAGA
CACACAAGGCACGGCCTCTCTCACAAAGCAATCAGCCGGCAAAGAACCCA
GCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACTAATCGCC
AGCCTCACCACTCGCCTCAACGCCATCAAGACCCTCGAATCCCGTATCTC
CCTCATCAAATCCTACGTCGCGAGCAACTCCACCTCCGATCCAGAAACCC
CCACCTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACATCAACGCT
CTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACGAAGCGCCTTCAC
GGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTCCCTATTAG
GACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGAAACGAACT
GCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAAACGCAACA
ATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGGGGATGGGG
TGAGTCATGGATAGATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAG
AACTCCGACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGAC
CATCTCAGACCACATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTA
TAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAA
CACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGAT
TCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAATTCAAAGATGTACACA
AAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCC
GGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCA
CAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATG
CATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATAC
GAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGA
GGAACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAA
CGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGA
AACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGC
CGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAG
AAGAACTAATCGCCAGCCTCACCACTCGCCTCAACGCCATCAAGACCCTC
GAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCAACTCCACCTC
CGATCCAGAAACCCCCACCTCAACAACAACCCTCTCCCACCCCATCCTCC
GCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAA
CGAAGCGCCTTCACGGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCT
CGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGC
TCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCG
CGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTC
GACTGGGGATGGGGTGAGTCATGGATAGATGTCTGATCAGCCGGAATCCC
TCCTATCTCCGAAGAACTCCGACTCCGGCCTCCATATCCAGCTCCACCCT
CTGATCCTCCTGACCATCTCAGACCACATCACCCGCCATGCCGCCCGCTC
TCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCG
AAATCACCTTGGAACACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAAT
GGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAATT
CAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAA
CTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCAG
ATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATC
CCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCT
ACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAATG
CAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAATTGCC
CTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAG
CAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCTC
ACAAAGCAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCT
CTCCCCCGAGGAAGAAGAACTAATCGCCAGCCTCACCACTCGCCTCAACG
CCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCG
AGCAACTCCACCTCCGATCCAGAAACCCCCACCTCAACAACAACCCTCTC
CCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTC
TCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCGCCCAGAGC
AACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAG
CGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGAC
GGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTC
ACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370349M747DRAFT_370349Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370349-T1M747DRAFT_370349-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370349-T1.utr5p1M747DRAFT_370349-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370349-T1.exon1M747DRAFT_370349-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_370349-T1.exon2M747DRAFT_370349-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_370349-T1.exon3M747DRAFT_370349-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370349-T1.cdsM747DRAFT_370349-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370349-T1.utr3p1M747DRAFT_370349-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0030137
DBxrefInterPro:IPR033859
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR000555
DBxrefInterPro:IPR024969
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
ProductCOP9 signalosome complex subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:480956..482391 +
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