You are here

Home

M747DRAFT_370411-T1, M747DRAFT_370411-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370411-T1
Unique NameM747DRAFT_370411-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851915.1:59585..60525+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370411-T1 ID=M747DRAFT_370411-T1|Name=M747DRAFT_370411-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=941bp|location=Sequence derived from alignment at KZ851915.1:59585..60525+ (Aspergillus niger ATCC 13496)
TACTACTATCTACTATCTACTCATTTCAATCCAGTACAGCCACCATGTCG
ACCCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCGGCCTGCGATGT
ACATCCCCTTAACCATATTCAACCCATCAAACACTACTAACTCATGAAAA
CCAGGTCTCCGACGCCCTCCTCAAACTCCAATCCGTCCCTTCAAATACCC
CACCCCGAGCAGGCTACATCGCAGACCTAAGTATATACACCCATCGTCAA
CCACCACCGCTACCAAATTACTAACAAACCCCATCTACTAAAAACAGCCC
CCTACCCTCCAAACACCACCACACCCACCAAACTAATCGCCCCCGCCAGC
ACCCTTCAATTCATCCCCAAATCCAACCCCACCCCCACCAGCAGCAGCAT
CCCACCCTCCACGCACTGGTCCGACCTCACCACCCCAAATACAATACTTG
TCATCTCTCAACCCCCAGACCAGCACTGCGCCGTAGTCGGAGGCATCATG
GCCCTTCGGATGAAAGTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAG
AGTGCGCGATCGCGCGGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGA
GGGGAGGGTCGACGGTGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATG
GGTGGGGAGGTGTGTGTTTCGGGGGTTACTGTACGGGAGGTATGTCTTTC
TTTCTTTCTTTTTGTTGTAAGTGTTTTGAGAATTGGGTTGGGTTGGCTAA
TGTGTGTGCAGGGAGACATCATCTTCTGCGATTACGAGGAAGGAGGGGTG
GTGGCTATACCTCGGGACTTGCTGGATCGGGTTCTCGAGCTGATGCCGAA
GTTGGCGGGGATGGATGATAAGGTCAAGGAGGCGGTGGAGGGGGGAATGA
GTGTGTTTGAGGCATTTGGGAAGTTTAGGGGGAAGATCTAA
back to top

Coding sequence (CDS) from alignment at KZ851915.1:59585..60525+

>M747DRAFT_370411-T1 ID=M747DRAFT_370411-T1|Name=M747DRAFT_370411-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2808bp|location=Sequence derived from alignment at KZ851915.1:59585..60525+ (Aspergillus niger ATCC 13496)
ATGTCGACCCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCGGCCTG
CGATGTCTCCGACGCCCTCCTCAAACTCCAATCCGTCCCTTCAAATACCC
CACCCCGAGCAGGCTACATCGCAGACCTAACCCCCTACCCTCCAAACACC
ACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCATCCC
CAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACGCACT
GGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACCCCCA
GACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGAAAGT
TCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGCGCGG
AGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGACGGTG
GGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGTGTGT
TTCGGGGGTTACTGTACGGGAGGGAGACATCATCTTCTGCGATTACGAGG
AAGGAGGGGTGGTGGCTATACCTCGGGACTTGCTGGATCGGGTTCTCGAG
CTGATGCCGAAGTTGGCGGGGATGGATGATAAGGTCAAGGAGGCGGTGGA
GGGGGGAATGAGTGTGTTTGAGGCATTTGGGAAGTTTAGGGGGAAGATCT
AAATGTCGACCCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCGGCC
TGCGATGTCTCCGACGCCCTCCTCAAACTCCAATCCGTCCCTTCAAATAC
CCCACCCCGAGCAGGCTACATCGCAGACCTAACCCCCTACCCTCCAAACA
CCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCATC
CCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACGCA
CTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACCCC
CAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGAAA
GTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGCGC
GGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGACGG
TGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGTGT
GTTTCGGGGGTTACTGTACGGGAGGGAGACATCATCTTCTGCGATTACGA
GGAAGGAGGGGTGGTGGCTATACCTCGGGACTTGCTGGATCGGGTTCTCG
AGCTGATGCCGAAGTTGGCGGGGATGGATGATAAGGTCAAGGAGGCGGTG
GAGGGGGGAATGAGTGTGTTTGAGGCATTTGGGAAGTTTAGGGGGAAGAT
CTAAATGTCGACCCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCGG
CCTGCGATGTCTCCGACGCCCTCCTCAAACTCCAATCCGTCCCTTCAAAT
ACCCCACCCCGAGCAGGCTACATCGCAGACCTAACCCCCTACCCTCCAAA
CACCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCA
TCCCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACG
CACTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACC
CCCAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGA
AAGTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGC
GCGGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGAC
GGTGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGT
GTGTTTCGGGGGTTACTGTACGGGAGGGAGACATCATCTTCTGCGATTAC
GAGGAAGGAGGGGTGGTGGCTATACCTCGGGACTTGCTGGATCGGGTTCT
CGAGCTGATGCCGAAGTTGGCGGGGATGGATGATAAGGTCAAGGAGGCGG
TGGAGGGGGGAATGAGTGTGTTTGAGGCATTTGGGAAGTTTAGGGGGAAG
ATCTAAATGTCGACCCTCGAAGAAAAGATCTCCCTCTTACACAACTACTC
GGCCTGCGATGTCTCCGACGCCCTCCTCAAACTCCAATCCGTCCCTTCAA
ATACCCCACCCCGAGCAGGCTACATCGCAGACCTAACCCCCTACCCTCCA
AACACCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATT
CATCCCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCA
CGCACTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAA
CCCCCAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGAT
GAAAGTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATC
GCGCGGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCG
ACGGTGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGT
GTGTGTTTCGGGGGTTACTGTACGGGAGGGAGACATCATCTTCTGCGATT
ACGAGGAAGGAGGGGTGGTGGCTATACCTCGGGACTTGCTGGATCGGGTT
CTCGAGCTGATGCCGAAGTTGGCGGGGATGGATGATAAGGTCAAGGAGGC
GGTGGAGGGGGGAATGAGTGTGTTTGAGGCATTTGGGAAGTTTAGGGGGA
AGATCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370411M747DRAFT_370411Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370411-T1M747DRAFT_370411-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370411-T1.utr5p1M747DRAFT_370411-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370411-T1.exon1M747DRAFT_370411-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_370411-T1.exon2M747DRAFT_370411-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_370411-T1.exon3M747DRAFT_370411-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_370411-T1.exon4M747DRAFT_370411-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370411-T1.cdsM747DRAFT_370411-T1.cdsAspergillus niger ATCC 13496CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036704
DBxrefInterPro:IPR005493
DBxrefPFAM:PF03737
ProductRraA-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851915.1supercontigKZ851915.1:59585..60525 +
Powered by Drupal