You are here

Home

M747DRAFT_370948-T1, M747DRAFT_370948-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370948-T1
Unique NameM747DRAFT_370948-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:549568..551143+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370948-T1 ID=M747DRAFT_370948-T1|Name=M747DRAFT_370948-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1576bp|location=Sequence derived from alignment at KZ851917.1:549568..551143+ (Aspergillus niger ATCC 13496)
CATGATGTAGCTAAATCGGGGCATCGCCCACGACTCGATTGGTACAGACT
ATAGCTCAATTCTGACGATATTATAGTGATTGCTAATCTGAAGACGACTT
TCTGCATCAGAGCTACTATAAATTTTCTCAAATTGGCTCACCAACCGGAT
TCCACGCATATAAAGCCCTAGCATTTGGTTCTTGTCTGCCGCCGGCGTTT
GCACAATATTAAGCGATGCAGCAAAGAAACCCTCGGATATAGATAAATAG
CACGATGTACCGCTCATATAACAAATTAGCTCTGACTCAAAGCAAACATA
TGCTGGTATGTCTGGAAGTCTGGTCTCTTCGCTTGCATCACATTATGGTT
GCCGATTAGTTATCCCTCGGCATAAATGTCTTCCCCGCATGTCACTTACT
ATATATACTGAGTGTCGAGCTAAGACAATACTGCCAGAGGTTACAGCCAA
CATCATCTACTACCACAATGTCCGAAACCAACAATTTACCTCCATTCCCA
TCCGACATTCCCACAGCTCCTCTCCTCCGTCTTTCACTTTCCAAACTACA
AGCCCACGATATCACGGAAACCCACAACCTCCTACAAGCCTGCAAAGACA
TCGGCTTCTTCTACCTCGATCTCCGCGATTCAAACGAGGGCACCAACCTG
CTCAACAACGCAGACAAGCTATTCCCAATAGGCGAGCGCCTATTCGACCT
ACCCCTAGACGAGAAAAAGAAATACGACCTCGCCAGCCAGAAATCCTATT
ATGGATACAAAGCGCAAGGTGCCATGGTAGCAGACAGACAGGGCAATCTA
GACGGGAATGAGTTCTACAATGTCCCTATCCCCCATTATACCATCCTACA
ATCCAACCACATACTAACACCCACATGCAGGTCTCCAAAGACGATATCCT
GAACATCGCTCCCTCTCTCCCATCCCCACCAATCCTACAGGAATCCCGTC
CCCTTCTCGAATCATTCGTCCGAACCTCCCACGACATCGTGACTCTCCTT
CTCTCAATCCTAAGCGATAGCCTTTCTCTTCCTACATCTACCCTGCCCGA
CCTCCACCGTCTAACCGCCCCAAGCGGTGACCAAATCCGCTTCATCAAGG
CCCCCCCTACCGCTACTCAGAACCCCACACTAGGCGAACACACCGACTTC
GGCAGCGTCACCATCCTCTTCAACCGTATCGGAGGCCTGCAAGTCCTCCC
TCCCGGAGCGGACGCAGAATGGACGTACGTGCGTCCGCTATCCGGCCATG
CTATTATCAACCTAGGTGATGCAATGGTGAAGTTCACTAACGGGCTGTTT
CGATCGAATATCCATCGGGTGGTTGCGCCGCCGGGACAGCAGGCGGGTTG
CACGCGGTATAGTCTGGTGTATTTTGCGAGGCCGGAGGATGAGGTTCCTT
TGCGGCGGTTGGAGTCGGATAGGATTCCGGCGTTGGGGGAGGGGGTGGTT
GAGGAGGAGATTAGTAGTAAGGATTGGGTGATAAGGAGGGCGTTAGGGAG
GAGGGTGGATTTGGGGCCGGTGGACTATGAGAAGGCGGCTGGGACGGAGG
GGGTGAGTAGGAGGTTGAGAGTCTAG
back to top

Coding sequence (CDS) from alignment at KZ851917.1:549568..551143+

>M747DRAFT_370948-T1 ID=M747DRAFT_370948-T1|Name=M747DRAFT_370948-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3393bp|location=Sequence derived from alignment at KZ851917.1:549568..551143+ (Aspergillus niger ATCC 13496)
ATGTACCGCTCATATAACAAATTAGCTCTGACTCAAAGCAAACATATGCT
GAGGTTACAGCCAACATCATCTACTACCACAATGTCCGAAACCAACAATT
TACCTCCATTCCCATCCGACATTCCCACAGCTCCTCTCCTCCGTCTTTCA
CTTTCCAAACTACAAGCCCACGATATCACGGAAACCCACAACCTCCTACA
AGCCTGCAAAGACATCGGCTTCTTCTACCTCGATCTCCGCGATTCAAACG
AGGGCACCAACCTGCTCAACAACGCAGACAAGCTATTCCCAATAGGCGAG
CGCCTATTCGACCTACCCCTAGACGAGAAAAAGAAATACGACCTCGCCAG
CCAGAAATCCTATTATGGATACAAAGCGCAAGGTGCCATGGTAGCAGACA
GACAGGGCAATCTAGACGGGAATGAGTTCTACAATGTCTCCAAAGACGAT
ATCCTGAACATCGCTCCCTCTCTCCCATCCCCACCAATCCTACAGGAATC
CCGTCCCCTTCTCGAATCATTCGTCCGAACCTCCCACGACATCGTGACTC
TCCTTCTCTCAATCCTAAGCGATAGCCTTTCTCTTCCTACATCTACCCTG
CCCGACCTCCACCGTCTAACCGCCCCAAGCGGTGACCAAATCCGCTTCAT
CAAGGCCCCCCCTACCGCTACTCAGAACCCCACACTAGGCGAACACACCG
ACTTCGGCAGCGTCACCATCCTCTTCAACCGTATCGGAGGCCTGCAAGTC
CTCCCTCCCGGAGCGGACGCAGAATGGACGTACGTGCGTCCGCTATCCGG
CCATGCTATTATCAACCTAGGTGATGCAATGGTGAAGTTCACTAACGGGC
TGTTTCGATCGAATATCCATCGGGTGGTTGCGCCGCCGGGACAGCAGGCG
GGTTGCACGCGGTATAGTCTGGTGTATTTTGCGAGGCCGGAGGATGAGGT
TCCTTTGCGGCGGTTGGAGTCGGATAGGATTCCGGCGTTGGGGGAGGGGG
TGGTTGAGGAGGAGATTAGTAGTAAGGATTGGGTGATAAGGAGGGCGTTA
GGGAGGAGGGTGGATTTGGGGCCGGTGGACTATGAGAAGGCGGCTGGGAC
GGAGGGGGTGAGTAGGAGGTTGAGAGTCTAGATGTACCGCTCATATAACA
AATTAGCTCTGACTCAAAGCAAACATATGCTGAGGTTACAGCCAACATCA
TCTACTACCACAATGTCCGAAACCAACAATTTACCTCCATTCCCATCCGA
CATTCCCACAGCTCCTCTCCTCCGTCTTTCACTTTCCAAACTACAAGCCC
ACGATATCACGGAAACCCACAACCTCCTACAAGCCTGCAAAGACATCGGC
TTCTTCTACCTCGATCTCCGCGATTCAAACGAGGGCACCAACCTGCTCAA
CAACGCAGACAAGCTATTCCCAATAGGCGAGCGCCTATTCGACCTACCCC
TAGACGAGAAAAAGAAATACGACCTCGCCAGCCAGAAATCCTATTATGGA
TACAAAGCGCAAGGTGCCATGGTAGCAGACAGACAGGGCAATCTAGACGG
GAATGAGTTCTACAATGTCTCCAAAGACGATATCCTGAACATCGCTCCCT
CTCTCCCATCCCCACCAATCCTACAGGAATCCCGTCCCCTTCTCGAATCA
TTCGTCCGAACCTCCCACGACATCGTGACTCTCCTTCTCTCAATCCTAAG
CGATAGCCTTTCTCTTCCTACATCTACCCTGCCCGACCTCCACCGTCTAA
CCGCCCCAAGCGGTGACCAAATCCGCTTCATCAAGGCCCCCCCTACCGCT
ACTCAGAACCCCACACTAGGCGAACACACCGACTTCGGCAGCGTCACCAT
CCTCTTCAACCGTATCGGAGGCCTGCAAGTCCTCCCTCCCGGAGCGGACG
CAGAATGGACGTACGTGCGTCCGCTATCCGGCCATGCTATTATCAACCTA
GGTGATGCAATGGTGAAGTTCACTAACGGGCTGTTTCGATCGAATATCCA
TCGGGTGGTTGCGCCGCCGGGACAGCAGGCGGGTTGCACGCGGTATAGTC
TGGTGTATTTTGCGAGGCCGGAGGATGAGGTTCCTTTGCGGCGGTTGGAG
TCGGATAGGATTCCGGCGTTGGGGGAGGGGGTGGTTGAGGAGGAGATTAG
TAGTAAGGATTGGGTGATAAGGAGGGCGTTAGGGAGGAGGGTGGATTTGG
GGCCGGTGGACTATGAGAAGGCGGCTGGGACGGAGGGGGTGAGTAGGAGG
TTGAGAGTCTAGATGTACCGCTCATATAACAAATTAGCTCTGACTCAAAG
CAAACATATGCTGAGGTTACAGCCAACATCATCTACTACCACAATGTCCG
AAACCAACAATTTACCTCCATTCCCATCCGACATTCCCACAGCTCCTCTC
CTCCGTCTTTCACTTTCCAAACTACAAGCCCACGATATCACGGAAACCCA
CAACCTCCTACAAGCCTGCAAAGACATCGGCTTCTTCTACCTCGATCTCC
GCGATTCAAACGAGGGCACCAACCTGCTCAACAACGCAGACAAGCTATTC
CCAATAGGCGAGCGCCTATTCGACCTACCCCTAGACGAGAAAAAGAAATA
CGACCTCGCCAGCCAGAAATCCTATTATGGATACAAAGCGCAAGGTGCCA
TGGTAGCAGACAGACAGGGCAATCTAGACGGGAATGAGTTCTACAATGTC
TCCAAAGACGATATCCTGAACATCGCTCCCTCTCTCCCATCCCCACCAAT
CCTACAGGAATCCCGTCCCCTTCTCGAATCATTCGTCCGAACCTCCCACG
ACATCGTGACTCTCCTTCTCTCAATCCTAAGCGATAGCCTTTCTCTTCCT
ACATCTACCCTGCCCGACCTCCACCGTCTAACCGCCCCAAGCGGTGACCA
AATCCGCTTCATCAAGGCCCCCCCTACCGCTACTCAGAACCCCACACTAG
GCGAACACACCGACTTCGGCAGCGTCACCATCCTCTTCAACCGTATCGGA
GGCCTGCAAGTCCTCCCTCCCGGAGCGGACGCAGAATGGACGTACGTGCG
TCCGCTATCCGGCCATGCTATTATCAACCTAGGTGATGCAATGGTGAAGT
TCACTAACGGGCTGTTTCGATCGAATATCCATCGGGTGGTTGCGCCGCCG
GGACAGCAGGCGGGTTGCACGCGGTATAGTCTGGTGTATTTTGCGAGGCC
GGAGGATGAGGTTCCTTTGCGGCGGTTGGAGTCGGATAGGATTCCGGCGT
TGGGGGAGGGGGTGGTTGAGGAGGAGATTAGTAGTAAGGATTGGGTGATA
AGGAGGGCGTTAGGGAGGAGGGTGGATTTGGGGCCGGTGGACTATGAGAA
GGCGGCTGGGACGGAGGGGGTGAGTAGGAGGTTGAGAGTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370948M747DRAFT_370948Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370948-T1M747DRAFT_370948-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370948-T1.utr5p1M747DRAFT_370948-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_370948-T1.utr5p2M747DRAFT_370948-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370948-T1.exon1M747DRAFT_370948-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_370948-T1.exon2M747DRAFT_370948-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_370948-T1.exon3M747DRAFT_370948-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_370948-T1.exon4M747DRAFT_370948-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370948-T1.cdsM747DRAFT_370948-T1.cdsAspergillus niger ATCC 13496CDS


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027443
DBxrefInterPro:IPR026992
DBxrefInterPro:IPR005123
DBxrefPFAM:PF14226
DBxrefPFAM:PF03171
ProductClavaminate synthase-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:549568..551143 +
Powered by Drupal