You are here

Home

M747DRAFT_371156-T1, M747DRAFT_371156-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_371156-T1
Unique NameM747DRAFT_371156-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851918.1:623719..624866-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_371156-T1 ID=M747DRAFT_371156-T1|Name=M747DRAFT_371156-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1148bp|location=Sequence derived from alignment at KZ851918.1:623719..624866- (Aspergillus niger ATCC 13496)
ATGAGCCCATCTATCCCACAGGTTGGCTGGGTAGGTTTGAACTTTGAACA
CCAGATCCCACTTGTACACGTGACTCACTGAAATGACAGTACGGCCTTGG
ATCTATGGGCCTTGGCATGTCATTGAACCTCCAGAGGTACCTTCAAGCAA
AGAACCTGCCTCCGCTTCGATACAGCAACAGAACAATCTCCAAGGGAGAT
ATTCTTCGGGATGCAGGGGCTGTGCCTGAAGAATTCGATGCACTAGTTCA
GAAATCCAATGTGATTTTCACAATGGTAGGTGCCGCTACTGTTCAATCAC
CTCAAAGAAATTCGGTTTGAGAGAACTACTAACAACTTGGAGATCTCCAC
CGATGATGTGTTGATCGATCTATTGGAGAAAGCTTCCACCATGGGGAACT
CTCTAAAGGGTAAAATCTTCGTTGACACATCTACTATTCACCCAGACACA
TCTGAGTGGGCAGCGAAACGTCTCAAAGAGCATGGTGCGACATTCATTGC
AGCACCAGTGTTTGGCGCAAGCCCAGTCGCAGCCGCTGGAAAGCTCATAT
TCGCTGTTTCTGGTCCTGTTACAGTAGTGGAAACAATCAGACCTCTTATC
ATGAATGTTATGGGACGCAGCATTATTGAAATGGGAGAAGACGTGCGCAA
ATCGAGTCTCCTCAAAATCTCAGGGTAAATAAATCATCTCCTTCCTCATG
TGGTTATTTTTCATGTATTAACTCTTTTCGTCTATGCAGGAACATCCTTG
TCATCAGCTTCATGGAGGTCATTGCTGAAGCACAGGTCTTTGCCGAGGTA
GCAGGAATCGGCACTCAGCAGATGGAGGACTTTATTGGAAATATGTTCGG
GTCCGTATTGCAAAGTTACAGCAAACGAATCACGAGTGGAGCTTATGCAC
CTCCTTTGGACACAGCGCCGGGGTTTGCGGCTGCTCTTGCATGTAAGGAC
ATGAAGCACGCTCTATCTATTGCCGACAGTCATAATGTCCGCCTACACAC
GCTTGAAACGGCTTCCAAAAGGCTGAATACTGCACGCGAGTATGCTGGCG
AGAATTTAGATAGCTCGGCTATCTATGGCATTGCTCGTCAAGAGGCGGGG
CTGTCATTCTGGAGTGCGACTAGTCGGCAACAAAGCCAATCCTCTTAG
back to top

Coding sequence (CDS) from alignment at KZ851918.1:623719..624866-

>M747DRAFT_371156-T1 ID=M747DRAFT_371156-T1|Name=M747DRAFT_371156-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3828bp|location=Sequence derived from alignment at KZ851918.1:623719..624866- (Aspergillus niger ATCC 13496)
GAACATCCTTGTCATCAGCTTCATGGAGGTCATTGCTGAAGCACAGGTCT
TTGCCGAGGTAGCAGGAATCGGCACTCAGCAGATGGAGGACTTTATTGGA
AATATGTTCGGGTCCGTATTGCAAAGTTACAGCAAACGAATCACGAGTGG
AGCTTATGCACCTCCTTTGGACACAGCGCCGGGGTTTGCGGCTGCTCTTG
CATGTAAGGACATGAAGCACGCTCTATCTATTGCCGACAGTCATAATGTC
CGCCTACACACGCTTGAAACGGCTTCCAAAAGGCTGAATACTGCACGCGA
GTATGCTGGCGAGAATTTAGATAGCTCGGCTATCTATGGCATTGCTCGTC
AAGAGGCGGGGCTGTCATTCTGGAGTGCGACTAGTCGGCAACAAAGCCAA
TCCTCTTAGATCTCCACCGATGATGTGTTGATCGATCTATTGGAGAAAGC
TTCCACCATGGGGAACTCTCTAAAGGGTAAAATCTTCGTTGACACATCTA
CTATTCACCCAGACACATCTGAGTGGGCAGCGAAACGTCTCAAAGAGCAT
GGTGCGACATTCATTGCAGCACCAGTGTTTGGCGCAAGCCCAGTCGCAGC
CGCTGGAAAGCTCATATTCGCTGTTTCTGGTCCTGTTACAGTAGTGGAAA
CAATCAGACCTCTTATCATGAATGTTATGGGACGCAGCATTATTGAAATG
GGAGAAGACGTGCGCAAATCGAGTCTCCTCAAAATCTCAGGTACGGCCTT
GGATCTATGGGCCTTGGCATGTCATTGAACCTCCAGAGGTACCTTCAAGC
AAAGAACCTGCCTCCGCTTCGATACAGCAACAGAACAATCTCCAAGGGAG
ATATTCTTCGGGATGCAGGGGCTGTGCCTGAAGAATTCGATGCACTAGTT
CAGAAATCCAATGTGATTTTCACAATGATGAGCCCATCTATCCCACAGGT
TGGCTGGGAACATCCTTGTCATCAGCTTCATGGAGGTCATTGCTGAAGCA
CAGGTCTTTGCCGAGGTAGCAGGAATCGGCACTCAGCAGATGGAGGACTT
TATTGGAAATATGTTCGGGTCCGTATTGCAAAGTTACAGCAAACGAATCA
CGAGTGGAGCTTATGCACCTCCTTTGGACACAGCGCCGGGGTTTGCGGCT
GCTCTTGCATGTAAGGACATGAAGCACGCTCTATCTATTGCCGACAGTCA
TAATGTCCGCCTACACACGCTTGAAACGGCTTCCAAAAGGCTGAATACTG
CACGCGAGTATGCTGGCGAGAATTTAGATAGCTCGGCTATCTATGGCATT
GCTCGTCAAGAGGCGGGGCTGTCATTCTGGAGTGCGACTAGTCGGCAACA
AAGCCAATCCTCTTAGATCTCCACCGATGATGTGTTGATCGATCTATTGG
AGAAAGCTTCCACCATGGGGAACTCTCTAAAGGGTAAAATCTTCGTTGAC
ACATCTACTATTCACCCAGACACATCTGAGTGGGCAGCGAAACGTCTCAA
AGAGCATGGTGCGACATTCATTGCAGCACCAGTGTTTGGCGCAAGCCCAG
TCGCAGCCGCTGGAAAGCTCATATTCGCTGTTTCTGGTCCTGTTACAGTA
GTGGAAACAATCAGACCTCTTATCATGAATGTTATGGGACGCAGCATTAT
TGAAATGGGAGAAGACGTGCGCAAATCGAGTCTCCTCAAAATCTCAGGTA
CGGCCTTGGATCTATGGGCCTTGGCATGTCATTGAACCTCCAGAGGTACC
TTCAAGCAAAGAACCTGCCTCCGCTTCGATACAGCAACAGAACAATCTCC
AAGGGAGATATTCTTCGGGATGCAGGGGCTGTGCCTGAAGAATTCGATGC
ACTAGTTCAGAAATCCAATGTGATTTTCACAATGATGAGCCCATCTATCC
CACAGGTTGGCTGGGAACATCCTTGTCATCAGCTTCATGGAGGTCATTGC
TGAAGCACAGGTCTTTGCCGAGGTAGCAGGAATCGGCACTCAGCAGATGG
AGGACTTTATTGGAAATATGTTCGGGTCCGTATTGCAAAGTTACAGCAAA
CGAATCACGAGTGGAGCTTATGCACCTCCTTTGGACACAGCGCCGGGGTT
TGCGGCTGCTCTTGCATGTAAGGACATGAAGCACGCTCTATCTATTGCCG
ACAGTCATAATGTCCGCCTACACACGCTTGAAACGGCTTCCAAAAGGCTG
AATACTGCACGCGAGTATGCTGGCGAGAATTTAGATAGCTCGGCTATCTA
TGGCATTGCTCGTCAAGAGGCGGGGCTGTCATTCTGGAGTGCGACTAGTC
GGCAACAAAGCCAATCCTCTTAGATCTCCACCGATGATGTGTTGATCGAT
CTATTGGAGAAAGCTTCCACCATGGGGAACTCTCTAAAGGGTAAAATCTT
CGTTGACACATCTACTATTCACCCAGACACATCTGAGTGGGCAGCGAAAC
GTCTCAAAGAGCATGGTGCGACATTCATTGCAGCACCAGTGTTTGGCGCA
AGCCCAGTCGCAGCCGCTGGAAAGCTCATATTCGCTGTTTCTGGTCCTGT
TACAGTAGTGGAAACAATCAGACCTCTTATCATGAATGTTATGGGACGCA
GCATTATTGAAATGGGAGAAGACGTGCGCAAATCGAGTCTCCTCAAAATC
TCAGGTACGGCCTTGGATCTATGGGCCTTGGCATGTCATTGAACCTCCAG
AGGTACCTTCAAGCAAAGAACCTGCCTCCGCTTCGATACAGCAACAGAAC
AATCTCCAAGGGAGATATTCTTCGGGATGCAGGGGCTGTGCCTGAAGAAT
TCGATGCACTAGTTCAGAAATCCAATGTGATTTTCACAATGATGAGCCCA
TCTATCCCACAGGTTGGCTGGGAACATCCTTGTCATCAGCTTCATGGAGG
TCATTGCTGAAGCACAGGTCTTTGCCGAGGTAGCAGGAATCGGCACTCAG
CAGATGGAGGACTTTATTGGAAATATGTTCGGGTCCGTATTGCAAAGTTA
CAGCAAACGAATCACGAGTGGAGCTTATGCACCTCCTTTGGACACAGCGC
CGGGGTTTGCGGCTGCTCTTGCATGTAAGGACATGAAGCACGCTCTATCT
ATTGCCGACAGTCATAATGTCCGCCTACACACGCTTGAAACGGCTTCCAA
AAGGCTGAATACTGCACGCGAGTATGCTGGCGAGAATTTAGATAGCTCGG
CTATCTATGGCATTGCTCGTCAAGAGGCGGGGCTGTCATTCTGGAGTGCG
ACTAGTCGGCAACAAAGCCAATCCTCTTAGATCTCCACCGATGATGTGTT
GATCGATCTATTGGAGAAAGCTTCCACCATGGGGAACTCTCTAAAGGGTA
AAATCTTCGTTGACACATCTACTATTCACCCAGACACATCTGAGTGGGCA
GCGAAACGTCTCAAAGAGCATGGTGCGACATTCATTGCAGCACCAGTGTT
TGGCGCAAGCCCAGTCGCAGCCGCTGGAAAGCTCATATTCGCTGTTTCTG
GTCCTGTTACAGTAGTGGAAACAATCAGACCTCTTATCATGAATGTTATG
GGACGCAGCATTATTGAAATGGGAGAAGACGTGCGCAAATCGAGTCTCCT
CAAAATCTCAGGTACGGCCTTGGATCTATGGGCCTTGGCATGTCATTGAA
CCTCCAGAGGTACCTTCAAGCAAAGAACCTGCCTCCGCTTCGATACAGCA
ACAGAACAATCTCCAAGGGAGATATTCTTCGGGATGCAGGGGCTGTGCCT
GAAGAATTCGATGCACTAGTTCAGAAATCCAATGTGATTTTCACAATGAT
GAGCCCATCTATCCCACAGGTTGGCTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050661NADP binding
GO:0051287NAD binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_371156M747DRAFT_371156Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_371156-T1M747DRAFT_371156-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_371156-T1.cdsM747DRAFT_371156-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_371156-T1.exon4M747DRAFT_371156-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_371156-T1.exon3M747DRAFT_371156-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_371156-T1.exon2M747DRAFT_371156-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_371156-T1.exon1M747DRAFT_371156-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006115
DBxrefInterPro:IPR029154
DBxrefInterPro:IPR015815
DBxrefPFAM:PF03446
DBxrefPFAM:PF14833
Product3-hydroxyisobutyrate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851918.1supercontigKZ851918.1:623719..624866 -
Powered by Drupal