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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851926.1:191716..193059+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_372238-T1 ID=M747DRAFT_372238-T1|Name=M747DRAFT_372238-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1344bp|location=Sequence derived from alignment at KZ851926.1:191716..193059+ (Aspergillus niger ATCC 13496) ACCGAGAAGAGGAGGACGCGCGATCCAGTTCGACTCCTCCCCGACGCGGA
TTTGGATTTCCATTTGACAAATACTCTATTTTATTTTTACAACCATCATG
ACGTCTTACGGGTTACTGGATCAACCAGACGAAGGTTGGTTCTAGAAACA
CGCCCCCGGTCCCTGTCACCATGCTAATGCCCTTCCAGATGGTCTCCACA
AGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGATTTCAAAA
CGCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGCTCCCTCC
CACCCCTCCACCAGATGGTGCAGACGACGATGCAACAGCAGCTGCAGAGG
CGGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGAAGATGTT
GCTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCCAGTTCCT
CTTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAGAAGCTTC
GAATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGAGCTGCGG
GTACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAAGCTACGA
TGAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCGCGCGAAG
ATCAACAGGCCAATTTACAAAAGCTACAGGCGGAAATAACGGAACTGGAG
AAAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAGAACAGTT
CGGTCGCATTGTCGAGGAAGGAATGCAACTTCGTCGGCTCATCCGTGACG
AGAAGGAGGAGGTCGAGCGCAGAGAAGGCATGCAAGAGGAGGAAGATGGA
GATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTAATACCCC
TCGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCATGATGATC
TTGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTACTGCCGGT
GCGGTGTCACCCTTGCGACAAATGACTGCGGTGGACGACGAAAATAAGAC
CACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTCCCCGAAG
AGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAAAATGGAC
ACTACTTGATTATCGGAGAATTTTCTCTACCACACATTGAGCAAGGAGTT
CGGTTGGTGGCGTTCGCATTAGGGTAACTATCACAATGCAACAATGGCTT
TGCTTTTCTCAGGGGCAATTTATTGAATAATTTTTCGTGCTGTGGATTAA
GTACATGTGCCAGTAGATGGGAAAATGAGCTATCTCAGGCGATC back to topCoding sequence (CDS) from alignment at KZ851926.1:191716..193059+ >M747DRAFT_372238-T1 ID=M747DRAFT_372238-T1|Name=M747DRAFT_372238-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2016bp|location=Sequence derived from alignment at KZ851926.1:191716..193059+ (Aspergillus niger ATCC 13496) ATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGTCTCCACAA GTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGATTTCAAAAC GCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGCTCCCTCCC ACCCCTCCACCAGATGGTGCAGACGACGATGCAACAGCAGCTGCAGAGGC GGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGAAGATGTTG CTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCCAGTTCCTC TTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAGAAGCTTCG AATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGAGCTGCGGG TACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAAGCTACGAT GAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCGCGCGAAGA TCAACAGGCCAATTTACAAAAGCTACAGGCGGAAATAACGGAACTGGAGA AAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAGAACAGTTC GGTCGCATTGTCGAGGAAGGAATGCAACTTCGTCGGCTCATCCGTGACGA GAAGGAGGAGGTCGAGCGCAGAGAAGGCATGCAAGAGGAGGAAGATGGAG ATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTAATACCCCT CGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCATGATGATCT TGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTACTGCCGGTG CGGTGTCACCCTTGCGACAAATGACTGCGGTGGACGACGAAAATAAGACC ACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTCCCCGAAGA GCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAAAATGGACA CTACTTGAATGACGTCTTACGGGTTACTGGATCAACCAGACGAAGATGGT CTCCACAAGTCGCGCCTTTTGAACGTCGAAGAAAAGCCTTTCAAGCGGAT TTCAAAACGCCTCCTCAACAACGATTCAACCGTAGTGTCCAACGCGACGC TCCCTCCCACCCCTCCACCAGATGGTGCAGACGACGATGCAACAGCAGCT GCAGAGGCGGAGAAACAGAGACGGCTCGAGGAATGGCGCCATTTCCGTGA AGATGTTGCTTTGGATTTTTCCGCATTTGAAGGCAGTATCGCGCGCATCC AGTTCCTCTTGACGAGTAACGAGAAGGAGCGCGAGCGCTATGCGACAGAG AAGCTTCGAATCCTTGATACAATGCAGTCGGTGCGTGACAATACCGCAGA GCTGCGGGTACAGCTCGAGGAGGCCCAGCGTCTACTAGCACTGCGCAAAA GCTACGATGAATTGGCAGAGAAGATTACCAGCAACCGACTCTTGAAGCCG CGCGAAGATCAACAGGCCAATTTACAAAAGCTACAGGCGGAAATAACGGA ACTGGAGAAAGAGAGTAAAGAATACGCACACACCTGGTCGGAACGGCGAG AACAGTTCGGTCGCATTGTCGAGGAAGGAATGCAACTTCGTCGGCTCATC CGTGACGAGAAGGAGGAGGTCGAGCGCAGAGAAGGCATGCAAGAGGAGGA AGATGGAGATGACGGGGATGTTCCCTCCAAGGGGAAATCCAGTGGAGCTA ATACCCCTCGTCACGAGTCAGACAGTCTGACTCCTTCTCAACATGGCCAT GATGATCTTGGACGATCACCAGCGGGCTTGCAAGTGGAAAAGACGGGTAC TGCCGGTGCGGTGTCACCCTTGCGACAAATGACTGCGGTGGACGACGAAA ATAAGACCACCCCCGATCAGGACACCTCAATGGAAGATGAAGGCGAGGTC CCCGAAGAGCTAGAAGAAGGGGAGGAAGTCCAGGATGACCGTGCAGACAA AATGGACACTACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0000445 | THO complex part of transcription export complex |
Vocabulary: Biological Process
Term | Definition |
GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR008501 |
DBxref | PFAM:PF05615 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851926.1 | supercontig | KZ851926.1:191716..193059 + |
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