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M747DRAFT_372475-T1, M747DRAFT_372475-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_372475-T1
Unique NameM747DRAFT_372475-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:186821..188193-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_372475-T1 ID=M747DRAFT_372475-T1|Name=M747DRAFT_372475-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1373bp|location=Sequence derived from alignment at KZ851928.1:186821..188193- (Aspergillus niger ATCC 13496)
CTTCCTCTTCCGTTGCTTGTCCACCAATGGTCGGCGATGGCGCGAACACA
CTCCCCCCGCTACCTTAATCCACCCAAAGGCGTTAGTGAGGTGATTTGCT
TCTGCTTTCCCCTCCCCGCCGCCTGACAGTTTTTTATTTTTTTTTGTCAA
ACCTCCTCTTGCCTCACCTGTACGACGTCCAAGGCACTGTCGCTGTATTT
TCAATATATAGATCTATTTCTCCTATCTTCAGATTTAGGGAAGATCTACT
GCAGGATTAGTGCTTGAGAATACGTGACAATCACCCTAAAGCCGATCGCC
CCGAGCTGTCTGTGCCTATCTAATCGATCTTCCAACCACGCGCAATATCC
ATCGCCATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCA
GTCGTCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCC
GGTTCTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACT
GTTGCACCTCCAGGACGATCATGAGTAATCGCTAATCGATCACTATTTAT
TTCTGCATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCT
TCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGA
ATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGC
CGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTT
GAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCT
GGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTACTTCGAAA
TTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGC
ATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGC
GTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACC
CTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTT
TTTTAACCCTTAACTTTCGAGTGACGGCGGGCTCATGTGTGTGTATAGTT
ATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTA
GACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTG
GGTGAAAGAAACGTAGTTTGAAGGAATTGTTCGCTGAAACGCTCAATTCT
TTGGAGTCCGGCAGTTGGAGGTCTTCTGTCTTGGGCCGCACGGCTATGAT
GACGATACATATGAAATAAACAACTGATTCACGTGAAATACTATAGTCTA
GTACTTTTTTGTAAGAAATGGGG
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Coding sequence (CDS) from alignment at KZ851928.1:186821..188193-

>M747DRAFT_372475-T1 ID=M747DRAFT_372475-T1|Name=M747DRAFT_372475-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2187bp|location=Sequence derived from alignment at KZ851928.1:186821..188193- (Aspergillus niger ATCC 13496)
TTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTC
TAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCG
TGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCATATATTCAT
TGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTG
TCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATT
CGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGC
CGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGG
CGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTAC
TTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGG
CAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATA
ACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAG
GAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATATGGCC
CAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTCTGACCC
CGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCTACAATT
GGGGCTGGGTCACCGGTACTGGTGGCGGGTTATGTGTGGGGAGACGACGT
CGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTG
CTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAGACT
TCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAA
GGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCA
AGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAG
CCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGG
CTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGG
TTGAGCGCGAGAAGGGCCCGAACGCCTACTTCGAAATTAGCAACATTGAA
CAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTA
CGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATC
TCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCT
GTCCTTGTGCGGAGACACGGAATATGGCCCAGGAAATCCAAAAAGAGAAC
AATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAACTTGAT
CCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCGGTACTG
GTGGCGGGTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTG
CGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTG
GCCTTCCGTGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCAT
ATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAA
CATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCA
AATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTG
TTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTC
TCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGA
ACGCCTACTTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGT
GGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGAT
TATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGG
CGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGA
ATATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCG
TCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTT
CTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0019509L-methionine salvage from methylthioadenosine
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDE1M747DRAFT_372475Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372475-T1M747DRAFT_372475-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372475-T1.cdsM747DRAFT_372475-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372475-T1.utr3p1M747DRAFT_372475-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372475-T1.exon3M747DRAFT_372475-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_372475-T1.exon2M747DRAFT_372475-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_372475-T1.exon1M747DRAFT_372475-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372475-T1.utr5p1M747DRAFT_372475-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027514
DBxrefInterPro:IPR017714
DBxrefInterPro:IPR036409
DBxrefInterPro:IPR001303
DBxrefPFAM:PF00596
ProductMethylthioribulose-1-phosphate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:186821..188193 -
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