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M747DRAFT_373400-T1, M747DRAFT_373400-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373400-T1
Unique NameM747DRAFT_373400-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:197992..199214+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373400-T1 ID=M747DRAFT_373400-T1|Name=M747DRAFT_373400-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1223bp|location=Sequence derived from alignment at KZ851937.1:197992..199214+ (Aspergillus niger ATCC 13496)
GGCCTGGCGACCTCTTCCCTTTCACCCAACACTCCGAATTCTGGCCCTTC
CTCTATCCAATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTC
CTGCTCCGCATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTC
TCCTTCCGCGGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAAC
CATGCAGACAAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCC
GTTCTCCTTGAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAG
ATCCCAAGGTTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGC
GACAAGATGCTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAG
TTTTGATCAGGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGTA
TGTCAAGTGTTGCTGTGCAATGAATGGTAACAGGATTGGATACTAATGCG
GATGGGGTTGTACACAGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGG
CTTTGGTCCAGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCG
TATGGCCGGGTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCT
CGACTACAACACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAAC
TTGCTCACAAGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAG
GTGAGTCTACGGTTCCCGTGCATTAAGACGACATTCGGACACCCTGCGCT
GCTGGGCTTTTGATATTGTCTTGTGAGTTGGTCAATTGGATCCCCTGCTA
ACAGCGGCGTGTTTACGTGTAGCCCAACAACCTCGAAAGCTCTGGAATGG
ACCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTG
GAGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGC
ACCTCTGGGATTCAAGATCGCGGCTTGATTTGGGTGATTGATTTATGGGA
AATGGCCGCAGGTGCATTTTCAAGGCGTTACTTCCTTTTTCTCTTTTCAC
CTTCCCCTTGTTTCTTTGTGCCCTGGATGTTTTGTGTATGTGTTGGGGCT
TTTTCTTCATCCGCCATATATTATGTATTTTTATCTACGACTTGTCTTAT
ATAGTGACTGCAAATACCACCGG
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Coding sequence (CDS) from alignment at KZ851937.1:197992..199214+

>M747DRAFT_373400-T1 ID=M747DRAFT_373400-T1|Name=M747DRAFT_373400-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2331bp|location=Sequence derived from alignment at KZ851937.1:197992..199214+ (Aspergillus niger ATCC 13496)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGTATTG
TTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGCTGCT
AACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACCCGGC
TTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTTACGA
GCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAGAGTT
GTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAATGGA
CCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGG
AGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCA
CCTCTGGGATTCAAGATCGCGGCTTGAATGGCTTCCGTACTATCGACTCG
CGCGGTCAGGACCGCCTCCTGCTCCGCATGCCGCTCCCTCGCTCGTCCCA
ACTCCATCGCAGCCGGTCTCCTTCCGCGGCGAGGACTCTCGACGGCCACC
GAAGATGCAGCAGTCAACCATGCAGACAAGCCCCGGTGGTCGTACACGCC
GCCTCGTGCCAAAGCGCCGTTCTCCTTGAGACTCAACTCCAACCGCCCCG
AGTTCCCCGTGAATTCAGATCCCAAGGTTCTGGACCGGTTCTACATCCTC
ATGCTCGGAAACGACGGCGACAAGATGCTCTCGGAGGAAACCAAGTGGCT
CGCAGTGACACACAAGAGTTTTGATCAGGGCCGGAGAGGTTTCAACGACC
GTTTGGCCTTCCTGGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCT
TTGGTCCAGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTA
TGGCCGGGTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCG
ACTACAACACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTT
GCTCACAAGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGCC
CAACAACCTCGAAAGCTCTGGAATGGACCTCGTTCTCGCCCACACGATGT
ACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGCAATGCTGTTGCGAAC
AAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGGATTCAAGATCGCGGC
TTGAATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCT
CCGCATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTT
CCGCGGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGC
AGACAAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCT
CCTTGAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCC
AAGGTTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAA
GATGCTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTG
ATCAGGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGT
ATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGC
TGCTAACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACC
CGGCTTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTT
ACGAGCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAG
AGTTGTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAA
TGGACCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCC
CTGGAGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATT
AGCACCTCTGGGATTCAAGATCGCGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373400M747DRAFT_373400Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373400-T1M747DRAFT_373400-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373400-T1.utr5p1M747DRAFT_373400-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373400-T1.exon1M747DRAFT_373400-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_373400-T1.exon2M747DRAFT_373400-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373400-T1.exon3M747DRAFT_373400-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373400-T1.cdsM747DRAFT_373400-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373400-T1.utr3p1M747DRAFT_373400-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:197992..199214 +
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