You are here

Home

M747DRAFT_373462-T1, M747DRAFT_373462-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373462-T1
Unique NameM747DRAFT_373462-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851938.1:101060..102129-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373462-T1 ID=M747DRAFT_373462-T1|Name=M747DRAFT_373462-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1070bp|location=Sequence derived from alignment at KZ851938.1:101060..102129- (Aspergillus niger ATCC 13496)
CGATCATACATCATCGAGCGCATAGCGTCCCTTCTAGAACTGTGCCTACC
TATATATACCCCAGCTATCTCTGCCCCCATTGAACTAAACTTATCAACCA
TCTAGCAGTCTTTTTCTGGGACGTTCGTCCTTTTAGGCTCTACTGTTTTA
CCAAGTACTACAACAACCTTCTCAATGCAGAACGTTCCGGGTCGCAATTC
GAGTTCCGGCAGGAAAGCTGCTTATACAAACACTTCCATGCCAAACACCC
ATGGAACCGAGTGTACTGGAACCCAACCTACTCCGACAAGCCTTGGCCAA
AAAACAGGTGAAAATGCGGACTTCAGCTCAGCAGTAGTAGACCCGACAGC
GGCATTCCAGTTCAGCGACCCATTCAACCAAATTCTCTTTGGCTATCCGA
CCGCTGCGGACCCCCTCCATGTCATCAACGAGTACAACCCAAGTCAGCCT
GCCCACCCTGGATTGCACGAGTATCAGCCAGGAGGGGAGATTCTAGAACA
ATTGTTCCTGAGTCGCCCCCCGATGGTCCCCTTGCCGGAAGCTGCTGCGG
TCCCACCCGCGCTGACCTATGGCATACGCGGAGGTCGCGGGCAAGAACCC
ATGATGTAAGTAGTTGAGAGATAAGTACCCTACGATTGCATCGTTTTGAT
GATGAGAGTTGCGATCCAGACCCCAACTTGCCACACTCCGCTGCAAGTGG
GAAGGTTGTACGTATTCGCGATCCTTCAACAGGAGAGAAGAACTGCTCCG
ACATGTCAGAAACCTCCATGTTTCTCCCCGGTCTTACCCTTGCGAAACGT
GCGGTCGGCGATTCAATCAGTCATATAACAGAGCGGTCCATATGCGGGTT
CATCAGATGGGAGGGGTATCACGTGGGTGAGGCCAAACACATCACCGTTA
TATGCTCTTTTTATCGCCACAATCCTTTTCTTGTCTTACTTTGTTTGTTG
TCTGGGGGAATCGGGGTATTGTTCGCGAAAGGACAGAAGGCATGCGTATT
AGGGCATTTTCTTCCTTCCCTTTTCTTTTTATCTAGAATATGTTTTCTAC
GTTCTCATGAGACATTTCGG
back to top

Coding sequence (CDS) from alignment at KZ851938.1:101060..102129-

>M747DRAFT_373462-T1 ID=M747DRAFT_373462-T1|Name=M747DRAFT_373462-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1284bp|location=Sequence derived from alignment at KZ851938.1:101060..102129- (Aspergillus niger ATCC 13496)
ACCCCAACTTGCCACACTCCGCTGCAAGTGGGAAGGTTGTACGTATTCGC
GATCCTTCAACAGGAGAGAAGAACTGCTCCGACATGTCAGAAACCTCCAT
GTTTCTCCCCGGTCTTACCCTTGCGAAACGTGCGGTCGGCGATTCAATCA
GTCATATAACAGAGCGGTCCATATGCGGGTTCATCAGATGGGAGGGGTAT
CACGTGGGTGAATGCAGAACGTTCCGGGTCGCAATTCGAGTTCCGGCAGG
AAAGCTGCTTATACAAACACTTCCATGCCAAACACCCATGGAACCGAGTG
TACTGGAACCCAACCTACTCCGACAAGCCTTGGCCAAAAAACAGGTGAAA
ATGCGGACTTCAGCTCAGCAGTAGTAGACCCGACAGCGGCATTCCAGTTC
AGCGACCCATTCAACCAAATTCTCTTTGGCTATCCGACCGCTGCGGACCC
CCTCCATGTCATCAACGAGTACAACCCAAGTCAGCCTGCCCACCCTGGAT
TGCACGAGTATCAGCCAGGAGGGGAGATTCTAGAACAATTGTTCCTGAGT
CGCCCCCCGATGGTCCCCTTGCCGGAAGCTGCTGCGGTCCCACCCGCGCT
GACCTATGGCATACGCGGAGGTCGCGGGCAAGAACCCATGATACCCCAAC
TTGCCACACTCCGCTGCAAGTGGGAAGGTTGTACGTATTCGCGATCCTTC
AACAGGAGAGAAGAACTGCTCCGACATGTCAGAAACCTCCATGTTTCTCC
CCGGTCTTACCCTTGCGAAACGTGCGGTCGGCGATTCAATCAGTCATATA
ACAGAGCGGTCCATATGCGGGTTCATCAGATGGGAGGGGTATCACGTGGG
TGAATGCAGAACGTTCCGGGTCGCAATTCGAGTTCCGGCAGGAAAGCTGC
TTATACAAACACTTCCATGCCAAACACCCATGGAACCGAGTGTACTGGAA
CCCAACCTACTCCGACAAGCCTTGGCCAAAAAACAGGTGAAAATGCGGAC
TTCAGCTCAGCAGTAGTAGACCCGACAGCGGCATTCCAGTTCAGCGACCC
ATTCAACCAAATTCTCTTTGGCTATCCGACCGCTGCGGACCCCCTCCATG
TCATCAACGAGTACAACCCAAGTCAGCCTGCCCACCCTGGATTGCACGAG
TATCAGCCAGGAGGGGAGATTCTAGAACAATTGTTCCTGAGTCGCCCCCC
GATGGTCCCCTTGCCGGAAGCTGCTGCGGTCCCACCCGCGCTGACCTATG
GCATACGCGGAGGTCGCGGGCAAGAACCCATGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373462M747DRAFT_373462Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373462-T1M747DRAFT_373462-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373462-T1.cdsM747DRAFT_373462-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373462-T1.utr3p1M747DRAFT_373462-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373462-T1.exon2M747DRAFT_373462-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373462-T1.exon1M747DRAFT_373462-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373462-T1.utr5p1M747DRAFT_373462-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851938.1supercontigKZ851938.1:101060..102129 -
Powered by Drupal