You are here

Home

M747DRAFT_373642-T1, M747DRAFT_373642-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373642-T1
Unique NameM747DRAFT_373642-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851940.1:190369..191617-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373642-T1 ID=M747DRAFT_373642-T1|Name=M747DRAFT_373642-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1249bp|location=Sequence derived from alignment at KZ851940.1:190369..191617- (Aspergillus niger ATCC 13496)
CCTCCGAAACGTCCCCGCACCGTCAGTGCTTAGTACCAGCTCAAGTTAAG
TCGGCCATCAGTCGATCATCCAAATAGTTACACCTTGTTTGTTTCAAGAA
GACTTAATAAAACCAAGCACCCCAAACTCTCGCGACCGCTCAACTGGCTC
CTCACCATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTCGT
TGCCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTATG
AAAGCCAGGCTTGTCTGCTCTCCATGCAAAAGGGCAAACATGCAGAACTA
CTAAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCTCTTAGACAA
AACGTAAGCTATTCCCCGGCTATCCCCACAAGTTGGCAAATCGCTAATCC
GCAAGTTATTCAGCATCGAAGCTCGCCTAACGACACAACGCATGCCACAA
GAATTATTACAAAATGACTCGTCGCTACAGAATTGTTTGACGCTTCTCCG
AGCCGTTTGGCAACGGAAATATGAGCAAGTTTACAAGATCCTGCGAGAAC
TGCCGTGGCCAGAAGCACTCCAACCCATAGTCCAAAGTTATGAATGTAAG
GCGAACCATTTTCTCGAATATGCCTTGCCTTTTGCTACGTCATTCACTTG
CTGACTCTATTTAGCTCATTTCCAGGAAAAGACGTTAAAGGAAGTCAGCA
GAGCCTACGAGGCGATAAGGCCAGCAGCCGCTGCAACCTATCTCGGCCTT
GATCCTGCGGCTGCACAACAGGGCGATCCGGCCATCATGCAAAAGTTCAT
AGCGTATGGATGGACCTGGGATCAGGAGAAAGGGCTGTTGCACCCGAAAC
CGATCGTCGATGAAGTCCCTAAGAAAGATGTTCGACTGTACAATGAACTA
AGTGAGGTCATGGCGCTGATCGGAAATCGCCGGAGTTAAGCGTATCTTGG
AGTTTGCAAGCCAGGGGCTACCTTGCAATTCGTCTATCCTACAGTAACAG
GCGGGACATGACGGAGACATCGGATGACTACAGATCTAGAGCGCAACATC
CCGAGTCCGCATGTAACGACCTGACGGCGTCACGGAGCATATCATAGAAC
AGCCCCACGGACAATGGGCATAATATTGCGCAAGCGCACTCAGTACGAGA
AGGAGATCAGCAATGAAACCGAAGCATACAGAATCTCTTGCTCTTCTGGT
CCAACTGTAGTGATACAGACGCACAACAGCCCAGGGTATGTACAAGATG
back to top

Coding sequence (CDS) from alignment at KZ851940.1:190369..191617-

>M747DRAFT_373642-T1 ID=M747DRAFT_373642-T1|Name=M747DRAFT_373642-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1962bp|location=Sequence derived from alignment at KZ851940.1:190369..191617- (Aspergillus niger ATCC 13496)
CTCATTTCCAGGAAAAGACGTTAAAGGAAGTCAGCAGAGCCTACGAGGCG
ATAAGGCCAGCAGCCGCTGCAACCTATCTCGGCCTTGATCCTGCGGCTGC
ACAACAGGGCGATCCGGCCATCATGCAAAAGTTCATAGCGTATGGATGGA
CCTGGGATCAGGAGAAAGGGCTGTTGCACCCGAAACCGATCGTCGATGAA
GTCCCTAAGAAAGATGTTCGACTGTACAATGAACTAAGTGAGGTCATGGC
GCTGATCGGAAATCGCCGGAGTTAACATCGAAGCTCGCCTAACGACACAA
CGCATGCCACAAGAATTATTACAAAATGACTCGTCGCTACAGAATTGTTT
GACGCTTCTCCGAGCCGTTTGGCAACGGAAATATGAGCAAGTTTACAAGA
TCCTGCGAGAACTGCCGTGGCCAGAAGCACTCCAACCCATAGTCCAAAGT
TATGAATATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCCGTCG
TTGCCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGACTAT
GAAAGCCAGGCTTGTCTGCTCTCCATGCAAAAGGGCAAACATGCAGAACT
ACTAAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCTCTTAGACA
AAACCTCATTTCCAGGAAAAGACGTTAAAGGAAGTCAGCAGAGCCTACGA
GGCGATAAGGCCAGCAGCCGCTGCAACCTATCTCGGCCTTGATCCTGCGG
CTGCACAACAGGGCGATCCGGCCATCATGCAAAAGTTCATAGCGTATGGA
TGGACCTGGGATCAGGAGAAAGGGCTGTTGCACCCGAAACCGATCGTCGA
TGAAGTCCCTAAGAAAGATGTTCGACTGTACAATGAACTAAGTGAGGTCA
TGGCGCTGATCGGAAATCGCCGGAGTTAACATCGAAGCTCGCCTAACGAC
ACAACGCATGCCACAAGAATTATTACAAAATGACTCGTCGCTACAGAATT
GTTTGACGCTTCTCCGAGCCGTTTGGCAACGGAAATATGAGCAAGTTTAC
AAGATCCTGCGAGAACTGCCGTGGCCAGAAGCACTCCAACCCATAGTCCA
AAGTTATGAATATGGATCTTCCCCCACTCTCACAAGAGCAACTGACCGCC
GTCGTTGCCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTATCAGA
CTATGAAAGCCAGGCTTGTCTGCTCTCCATGCAAAAGGGCAAACATGCAG
AACTACTAAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCTCTTA
GACAAAACCTCATTTCCAGGAAAAGACGTTAAAGGAAGTCAGCAGAGCCT
ACGAGGCGATAAGGCCAGCAGCCGCTGCAACCTATCTCGGCCTTGATCCT
GCGGCTGCACAACAGGGCGATCCGGCCATCATGCAAAAGTTCATAGCGTA
TGGATGGACCTGGGATCAGGAGAAAGGGCTGTTGCACCCGAAACCGATCG
TCGATGAAGTCCCTAAGAAAGATGTTCGACTGTACAATGAACTAAGTGAG
GTCATGGCGCTGATCGGAAATCGCCGGAGTTAACATCGAAGCTCGCCTAA
CGACACAACGCATGCCACAAGAATTATTACAAAATGACTCGTCGCTACAG
AATTGTTTGACGCTTCTCCGAGCCGTTTGGCAACGGAAATATGAGCAAGT
TTACAAGATCCTGCGAGAACTGCCGTGGCCAGAAGCACTCCAACCCATAG
TCCAAAGTTATGAATATGGATCTTCCCCCACTCTCACAAGAGCAACTGAC
CGCCGTCGTTGCCTCTGCTAAAACGCCGACGGAGCTCTACGAAACACTAT
CAGACTATGAAAGCCAGGCTTGTCTGCTCTCCATGCAAAAGGGCAAACAT
GCAGAACTACTAAGTCTTTACTACTCTACATACTTCTTCTCCAACCTTCT
CTTAGACAAAAC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373642M747DRAFT_373642Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373642-T1M747DRAFT_373642-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373642-T1.cdsM747DRAFT_373642-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373642-T1.utr3p1M747DRAFT_373642-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373642-T1.exon3M747DRAFT_373642-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_373642-T1.exon2M747DRAFT_373642-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373642-T1.exon1M747DRAFT_373642-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373642-T1.utr5p1M747DRAFT_373642-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR033464
DBxrefPFAM:PF10075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851940.1supercontigKZ851940.1:190369..191617 -
Powered by Drupal