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M747DRAFT_373734-T1, M747DRAFT_373734-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373734-T1
Unique NameM747DRAFT_373734-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851942.1:19096..20362-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373734-T1 ID=M747DRAFT_373734-T1|Name=M747DRAFT_373734-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1267bp|location=Sequence derived from alignment at KZ851942.1:19096..20362- (Aspergillus niger ATCC 13496)
ATGCACGCCCCCTCGATTAGCGGGATGCGTACCGCCATGCTGAGCGGACG
CCTCACCTCCAAGACGCTGGGCCCCTTCGCCCACCCCAGCAGCTGCACCA
ACCCGTTGTATCAAGCGCTCTCTCAGACCCGGACCGCAAGCACCTCCTCC
ATGCGAGTCCGCAGCACACAGACCCTGAAGCCCACCACAGCTCTGCGTCC
CTCGACGACGACAACGCAGCTCCCGAGCTCTCTGGTTCTCCGCCGCGCCA
ACTCCTCTGCCGCCGCCGCTGCCAAGAGCGAAACCGTCCGTCTCGACTGG
GACTCGTTCTTCAAACTCCGCGCTAGCCGCCGCCGGTACTCGCTCGCCTC
GTCGATCGTGAGCTCCCTGTTCACCACGGTCATTGGTGTGCAGGTTCTCT
CGACGCAGGATCTGGAGTCCCTCGGGGCGCAGGTCATGGGTCTTGATCCG
TTTGTGGTGCTGGGTATGGCAACGGCGGCGTGCGGTGCGGCGGGTTGGCT
TGTCGGTCCGTTTGTAGGGAATGCTGTTTGGGGGTTGGTTTATCGGAGAT
ATAAGCCTGCTGTTATGGTGGTAAGTTTCTTTCCTTTCCCTTACTTAAGT
TGCTATTGAGAAGAAGTGTGGATACTGATATTGGGTTGTGTATGTGTATA
GAAAGAGAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCT
CGTCCAACTCCATTGCTAATCCCGTTCCTGATTACTATGGTGAGAAGATC
GGTAGTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAA
CCGCAAGAGACGTCATTTCATCGTTTAGTTTAGTGGTTCTGTTTTGCATG
GGATGCCTCTTTTTTCTTTTGAGTGATTGTTATTATGGCATTCTCGAGAA
CCCCGTGGATTGAGTTCTCTACTTCCTGTTTGTACGAATATTCATATCAG
TGAGCGATTTAAAAATGATTATTGAATATGTTCACTTCTCTACTACAGTA
TCTACATGCCAGCGTTGCCTCCTAGTCTTTTTCTGCCTTTCACAACTTCG
ACTTTTCGACCTCCTTCCTCGGATCAATATCCACCTCTCCCCACCAAGGA
TAATTCCCCGGCCCATCCACGTCCAAATCACACTTGAACTCGGGCTTCCT
CTTCTCAAAGAACGCCCCGACACCCTCCTTCTGATCCCTACAGCATCCCC
TTGTCAGCACCAATCAACACCGAAGGAAAAAGAACAAAAAACTTACTGCG
AAGCAAACATATGCCCC
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Coding sequence (CDS) from alignment at KZ851942.1:19096..20362-

>M747DRAFT_373734-T1 ID=M747DRAFT_373734-T1|Name=M747DRAFT_373734-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1494bp|location=Sequence derived from alignment at KZ851942.1:19096..20362- (Aspergillus niger ATCC 13496)
AAAGAGAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTC
GTCCAACTCCATTGCTAATCCCGTTCCTGATTACTATGGTGAGAAGATCG
GTAGTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAAC
CGCAAGAGACGTCATTTCATCGTTTAGATGCACGCCCCCTCGATTAGCGG
GATGCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCC
CCTTCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCT
CAGACCCGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGAC
CCTGAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCC
CGAGCTCTCTGGTTCTCCGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCC
AAGAGCGAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAACTCCGCGC
TAGCCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCA
CCACGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTC
GGGGCGCAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAAC
GGCGGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTAGGGAATG
CTGTTTGGGGGTTGGTTTATCGGAGATATAAGCCTGCTGTTATGGTGAAA
GAGAAGGAATTCTTCGACCGCATTAGACGCTTCCGTGTCGACCCCTCGTC
CAACTCCATTGCTAATCCCGTTCCTGATTACTATGGTGAGAAGATCGGTA
GTGTGCAGGGTTATCGCCAGTGGTTGAAGGATCAGCGGGCGTATAACCGC
AAGAGACGTCATTTCATCGTTTAGATGCACGCCCCCTCGATTAGCGGGAT
GCGTACCGCCATGCTGAGCGGACGCCTCACCTCCAAGACGCTGGGCCCCT
TCGCCCACCCCAGCAGCTGCACCAACCCGTTGTATCAAGCGCTCTCTCAG
ACCCGGACCGCAAGCACCTCCTCCATGCGAGTCCGCAGCACACAGACCCT
GAAGCCCACCACAGCTCTGCGTCCCTCGACGACGACAACGCAGCTCCCGA
GCTCTCTGGTTCTCCGCCGCGCCAACTCCTCTGCCGCCGCCGCTGCCAAG
AGCGAAACCGTCCGTCTCGACTGGGACTCGTTCTTCAAACTCCGCGCTAG
CCGCCGCCGGTACTCGCTCGCCTCGTCGATCGTGAGCTCCCTGTTCACCA
CGGTCATTGGTGTGCAGGTTCTCTCGACGCAGGATCTGGAGTCCCTCGGG
GCGCAGGTCATGGGTCTTGATCCGTTTGTGGTGCTGGGTATGGCAACGGC
GGCGTGCGGTGCGGCGGGTTGGCTTGTCGGTCCGTTTGTAGGGAATGCTG
TTTGGGGGTTGGTTTATCGGAGATATAAGCCTGCTGTTATGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0001405PAM complex, Tim23 associated import motor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373734M747DRAFT_373734Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373734-T1M747DRAFT_373734-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373734-T1.cdsM747DRAFT_373734-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373734-T1.utr3p1M747DRAFT_373734-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373734-T1.exon2M747DRAFT_373734-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373734-T1.exon1M747DRAFT_373734-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteBUSCO:EOG09264HN5
DBxrefInterPro:IPR013875
DBxrefPFAM:PF08566
Productpresequence translocated-associated motor subunit pam17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851942.1supercontigKZ851942.1:19096..20362 -
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