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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851914.1:376862..378646+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_38320-T1 ID=M747DRAFT_38320-T1|Name=M747DRAFT_38320-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1785bp|location=Sequence derived from alignment at KZ851914.1:376862..378646+ (Aspergillus niger ATCC 13496) TCCAATAATATCAGCAGTGGTGGTGGTGAGGACCTTTCGCGATAAGCGGC
ACGTGACCATCCCACGACCGCGATTTTTCTGCCGAAATTCAGTCCAACAT
TTAATCTTCATCTTTGAGCTTCATTCTCACCATCACAACTATATCCCCTC
CCTTCTCACTTTTCTCCCTGAGTATCTCTCCCGGATAACCGGTTACCGCC
CAAAATGCCTCCCCGGAAGCAGTGGATGTAGGTTGCCCCTCCACATTCAC
CTACTCAAATCTATGTACCCAACTAACCCACTCTCAGCGACAAGAAAACC
GCAACTACCTACCAACTCTTCCACCGTTCCCAACATGACCCTCTCATTCA
CGATCCCTCTGCTGACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCA
TCACCCCCAGTGAATCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTC
GCCGAGCTGAATCAAACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGA
AGCCGCCAACTACGGCATTTTCTACGATGACTCGCAATACGACTACATGC
AGCACTTGCGCGAGCTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAA
GCCAAGACGAAGGGCAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGC
TTTGAAACAGGTATCGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCG
AAAGCGTCTACAGCTATGACATGCGCTCGACGGCGTCTTCCTACGTGCGC
AAACCCACCTACCAGGACCAGCAGAACGTGCCCGATGCTATTGCGGGTTT
CCAGCCGGATATGGACCCGCGGTTGCGCGAAGCCTTGGAGGCGCTGGAGG
ACGAGGAGTACGTGGATGAAGATGACGAGGAGGACGTCTTCGGCCAGTTG
ACTACGCGGGCAGAGGAAATGGACCAGGGTGATTGGGAGGATACCATCTT
CGACGATGTCGAGGAAGAAGACGATGGATGGGAATCCGATGCGACAGAAA
AGGCCCCCGTGCAGATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCC
TCAGAGCAGGAGGATAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGC
GCCCGACATGCACCCCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGT
TCAAGAAGGACGCCAAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCT
CCCAGCGTCGTCCCCTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTT
CACCGTCGGAGGCACCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCA
CCAACCCCTCCGCCTACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAA
GGCCACCGTCTCCTCGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTC
CCTCGACGAGGAGGATGAGTTCGACGACAACATGTCCATGGTCAGTGGAA
TGACCGGTATGACCGGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCG
TCTCAGGCACCGAGTCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTC
CCACAACTTCAACAACATCATGGATGATTTCCTTGCTGGGTGGGATGACA
AGACGAGTTCCCAGGCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAG
AACGGTAATGAGGCGATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGG
ATTGGGCCCTGCTAGGGTTACTGGGAAGGTGTCGGGCAGGGCGTAGTGGA
TATTCCTCACCTGAGTGAGTGAGTGAGTGGAATGT back to topCoding sequence (CDS) from alignment at KZ851914.1:376862..378646+ >M747DRAFT_38320-T1 ID=M747DRAFT_38320-T1|Name=M747DRAFT_38320-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2964bp|location=Sequence derived from alignment at KZ851914.1:376862..378646+ (Aspergillus niger ATCC 13496) ATGCCTCCCCGGAAGCAGTGGATCGACAAGAAAACCGCAACTACCTACCA ACTCTTCCACCGTTCCCAACATGACCCTCTCATTCACGATCCCTCTGCTG ACGACCGCGTCCTGCACCCTGTCTACGGTCCTCCCATCACCCCCAGTGAA TCTTCCTCCGCCTCCAAGCACCGCGGCCAAAGTCTCGCCGAGCTGAATCA AACCTTCGGCGATGCCGCGCGCAAAAACGAAGGTGAAGCCGCCAACTACG GCATTTTCTACGATGACTCGCAATACGACTACATGCAGCACTTGCGCGAG CTGGGCACCGGCGCCGGCGACGCTTACTTCGTCGAAGCCAAGACGAAGGG CAAGGACAAGGGCAAAGGATTGAAGCTGGAGGATGCTTTGAAACAGGTAT CGCTGGATGATGGGCGAAGCGAGTTTGGTGGCACCGAAAGCGTCTACAGC TATGACATGCGCTCGACGGCGTCTTCCTACGTGCGCAAACCCACCTACCA GGACCAGCAGAACGTGCCCGATGCTATTGCGGGTTTCCAGCCGGATATGG ACCCGCGGTTGCGCGAAGCCTTGGAGGCGCTGGAGGACGAGGAGTACGTG GATGAAGATGACGAGGAGGACGTCTTCGGCCAGTTGACTACGCGGGCAGA GGAAATGGACCAGGGTGATTGGGAGGATACCATCTTCGACGATGTCGAGG AAGAAGACGATGGATGGGAATCCGATGCGACAGAAAAGGCCCCCGTGCAG ATGGACACCACGGCCGCAAAGGCCCGCTACCAAGCCTCAGAGCAGGAGGA TAAGCCCGGCGAGCTTCCCGAACACAACGAGCCCGCGCCCGACATGCACC CCGAAGACCAAGGCTGGATGCGCGAATTCGCCAAGTTCAAGAAGGACGCC AAGTCTGGCAAAACAGCCGGCGTCCCCGCCGGTCCTCCCAGCGTCGTCCC CTCCCATCAGGGCAGCACCCTCGCCTCGACCGTGTTCACCGTCGGAGGCA CCCCCATCCGCCGCAAGAAGCGCAAGGGCGCCCTCACCAACCCCTCCGCC TACTCCATGACTTCGTCCTCCCTCGCCCGTACAGAAGGCCACCGTCTCCT CGACGACCGCTTCGAGCGCGTCGAAGCCCTCTACTCCCTCGACGAGGAGG ATGAGTTCGACGACAACATGTCCATGGTCAGTGGAATGACCGGTATGACC GGTATGACTGGTGTCTCGGGCATTTCGACTGCCTCGTCTCAGGCACCGAG TCTCGTTGACGCGAACGGTGATGCCGTTCGTCCTTCCCACAACTTCAACA ACATCATGGATGATTTCCTTGCTGGGTGGGATGACAAGACGAGTTCCCAG GCTAAGCGGAAGGGCGCAAAGGCGAAGCGCGGAAAGAACGGTAATGAGGC GATTGGCATTCGCATGCTGGATGAGGTTCGGCAGGGATTGGGCCCTGCTA GGGTTACTGGGAAGGTGTCGGGCAGGGCGTAGATGCCTCCCCGGAAGCAG TGGATCGACAAGAAAACCGCAACTACCTACCAACTCTTCCACCGTTCCCA ACATGACCCTCTCATTCACGATCCCTCTGCTGACGACCGCGTCCTGCACC CTGTCTACGGTCCTCCCATCACCCCCAGTGAATCTTCCTCCGCCTCCAAG CACCGCGGCCAAAGTCTCGCCGAGCTGAATCAAACCTTCGGCGATGCCGC GCGCAAAAACGAAGGTGAAGCCGCCAACTACGGCATTTTCTACGATGACT CGCAATACGACTACATGCAGCACTTGCGCGAGCTGGGCACCGGCGCCGGC GACGCTTACTTCGTCGAAGCCAAGACGAAGGGCAAGGACAAGGGCAAAGG ATTGAAGCTGGAGGATGCTTTGAAACAGGTATCGCTGGATGATGGGCGAA GCGAGTTTGGTGGCACCGAAAGCGTCTACAGCTATGACATGCGCTCGACG GCGTCTTCCTACGTGCGCAAACCCACCTACCAGGACCAGCAGAACGTGCC CGATGCTATTGCGGGTTTCCAGCCGGATATGGACCCGCGGTTGCGCGAAG CCTTGGAGGCGCTGGAGGACGAGGAGTACGTGGATGAAGATGACGAGGAG GACGTCTTCGGCCAGTTGACTACGCGGGCAGAGGAAATGGACCAGGGTGA TTGGGAGGATACCATCTTCGACGATGTCGAGGAAGAAGACGATGGATGGG AATCCGATGCGACAGAAAAGGCCCCCGTGCAGATGGACACCACGGCCGCA AAGGCCCGCTACCAAGCCTCAGAGCAGGAGGATAAGCCCGGCGAGCTTCC CGAACACAACGAGCCCGCGCCCGACATGCACCCCGAAGACCAAGGCTGGA TGCGCGAATTCGCCAAGTTCAAGAAGGACGCCAAGTCTGGCAAAACAGCC GGCGTCCCCGCCGGTCCTCCCAGCGTCGTCCCCTCCCATCAGGGCAGCAC CCTCGCCTCGACCGTGTTCACCGTCGGAGGCACCCCCATCCGCCGCAAGA AGCGCAAGGGCGCCCTCACCAACCCCTCCGCCTACTCCATGACTTCGTCC TCCCTCGCCCGTACAGAAGGCCACCGTCTCCTCGACGACCGCTTCGAGCG CGTCGAAGCCCTCTACTCCCTCGACGAGGAGGATGAGTTCGACGACAACA TGTCCATGGTCAGTGGAATGACCGGTATGACCGGTATGACTGGTGTCTCG GGCATTTCGACTGCCTCGTCTCAGGCACCGAGTCTCGTTGACGCGAACGG TGATGCCGTTCGTCCTTCCCACAACTTCAACAACATCATGGATGATTTCC TTGCTGGGTGGGATGACAAGACGAGTTCCCAGGCTAAGCGGAAGGGCGCA AAGGCGAAGCGCGGAAAGAACGGTAATGAGGCGATTGGCATTCGCATGCT GGATGAGGTTCGGCAGGGATTGGGCCCTGCTAGGGTTACTGGGAAGGTGT CGGGCAGGGCGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0042274 | ribosomal small subunit biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09262VVF |
DBxref | InterPro:IPR007307 |
DBxref | PFAM:PF04180 |
Product | Low temperature viability protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851914.1 | supercontig | KZ851914.1:376862..378646 + |
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