You are here

Home

M747DRAFT_45415-T1, M747DRAFT_45415-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_45415-T1
Unique NameM747DRAFT_45415-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:299685..302177+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_45415-T1 ID=M747DRAFT_45415-T1|Name=M747DRAFT_45415-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2493bp|location=Sequence derived from alignment at KZ851916.1:299685..302177+ (Aspergillus niger ATCC 13496)
AGTGCTGTATCGGATCTGTAACTGATATTGTGGCTGACACCGCAGCTCCA
AGCAACTTCTTTCAGTTTGTCTATATGTTTAGTACATGCTGCGAAGCAAT
GCGAGGCATGAGTGATATCTTTGTATACCTGCTATATACTCATTTCTTTA
TCTACACCTGACTTCTGTTTCTTTACTGAACAACTTCCTCTCTCTTCTAT
CACAATGTTTGCACCACTCGGTCTATTCAAGGATATACCTTGTCCTGAAG
GGCAAAATTGCTTGCTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCC
TCCACATCAGCCTCCCAAGGAGGCCGTCAGAACACTCATATACCAAGAAC
AGTCAAGAACGAAATAGGAACAACATCAGGCGAAACAGCTGTCGAACCCA
AAGCACATGCTCCGGGTGACGAGAAAAAGGCCAAGGCAGTTGGCAAGCCG
GCATCTTCGCCCGCTAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGC
TCCGTCGAACAAGCCATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTC
AGTCCTTATTAAGGGAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCA
GCCAAAGCAAGCGCTCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGC
ACCGCGAGAAAGCCTAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCC
ATGGTGTGCGTCTGGCCATCCTCACCAAGTTGCATGCCGGTATGTCTGCT
CTAAATGACAAGTTGGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGT
TCTCACGCCGAATGAGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGA
CCGCCAAAGAGAATCCAAGCATATACTCTAATGTCATCAAGCTCCGTATA
GTAAAGCTCTCAAAGATGAGCAAGGAAGAATGGGCCAATGACGTCAAAAC
CCACCTTAATGAGCGTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAA
AACCGAAACCTCTTGACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTG
GCGAATAAGCTTGTGACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGT
TACAAAACCTCCGACGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTA
TTGAATCCAAGGGATGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAA
GTCTTCCCTGGTCGTCGGGAGGATGGAACCTTGACGACTGGAGGGCAATG
CACATATCACCCGGGCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATC
ACATCACGGGGCACAAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTG
GGAACTTCTGCTGGCTGTACCAAGGGCAAGACCCATGTATTCAAGGTATC
GGAAACCAAACGACTCGCATCAGTACTCCAGTTTCAGAAAACCCCGGAAC
AACCAGAGAAGGGGCGACTCCCGCCAGTTTGCTTCGACTGTGAAATGGGT
TACACGACACTGGGATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCC
TCAAGGCAAGACGCTCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGT
TGGATTTGAATTCCCGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAA
GCCATTCCCTATGGGAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGA
CGGGGAAGTGGACTCGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGTAG
CCCGGGCGCTTCTATTCGAATGCCTTCAACCAGATACGCCACTCATTGGT
CATGCGATCGATAATGACCTCAATGCGTGCCGCATCATTCATCCGACAAT
CATTGATACTGTGCTCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTA
TGAGCTTGAAGACTCTATGCCGAAGACACCTAGATCGAGACATCCAAACG
GGAGGCAGCAGCGGCCATGACTCAAAGGAAGACTCGATCGCTACGGGTGA
TCTGGTGAGGGTCAAGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAG
GCTGGCGCATACATAACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCG
GAAGCTGCAGCAGCACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCG
GGCAAGCTCGGCGTTGGGAGAGTAACGACACGATTGTCGATGACATAGAT
TAGTACACTTAGTGATACCCAGTTTACGCGTACTCAAATTGTACAACATC
CGACTACGTAATTTACAACGGAACAACATTAGGTTCGAGTGATAGATTGC
TCTATTCAATCGTGTATCTACCAGTCATAACGTCATGAGTAGAGGTAGCC
ATGACAAGCCGGGGCAGCCACGGATTGTCCACCTTTTCAGGAACAGACTT
CTCCGAGCCAACCACCAGCCATCGCCAAAGCGGTATAGGAATCCCTCCCT
GTAGAGCACATCTATACCCAAACCAGACTTCCAAGTGATAACC
back to top

Coding sequence (CDS) from alignment at KZ851916.1:299685..302177+

>M747DRAFT_45415-T1 ID=M747DRAFT_45415-T1|Name=M747DRAFT_45415-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1971bp|location=Sequence derived from alignment at KZ851916.1:299685..302177+ (Aspergillus niger ATCC 13496)
ATGTTTGCACCACTCGGTCTATTCAAGGATATACCTTGTCCTGAAGGGCA
AAATTGCTTGCTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCCTCCA
CATCAGCCTCCCAAGGAGGCCGTCAGAACACTCATATACCAAGAACAGTC
AAGAACGAAATAGGAACAACATCAGGCGAAACAGCTGTCGAACCCAAAGC
ACATGCTCCGGGTGACGAGAAAAAGGCCAAGGCAGTTGGCAAGCCGGCAT
CTTCGCCCGCTAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGCTCCG
TCGAACAAGCCATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTCAGTC
CTTATTAAGGGAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCAGCCA
AAGCAAGCGCTCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGCACCG
CGAGAAAGCCTAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCCATGG
TGTGCGTCTGGCCATCCTCACCAAGTTGCATGCCGGTATGTCTGCTCTAA
ATGACAAGTTGGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGTTCTC
ACGCCGAATGAGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGACCGC
CAAAGAGAATCCAAGCATATACTCTAATGTCATCAAGCTCCGTATAGTAA
AGCTCTCAAAGATGAGCAAGGAAGAATGGGCCAATGACGTCAAAACCCAC
CTTAATGAGCGTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAAAACC
GAAACCTCTTGACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTGGCGA
ATAAGCTTGTGACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGTTACA
AAACCTCCGACGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTATTGA
ATCCAAGGGATGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAAGTCT
TCCCTGGTCGTCGGGAGGATGGAACCTTGACGACTGGAGGGCAATGCACA
TATCACCCGGGCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATCACAT
CACGGGGCACAAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTGGGAA
CTTCTGCTGGCTGTACCAAGGGCAAGACCCATGTATTCAAGGTATCGGAA
ACCAAACGACTCGCATCAGTACTCCAGTTTCAGAAAACCCCGGAACAACC
AGAGAAGGGGCGACTCCCGCCAGTTTGCTTCGACTGTGAAATGGGTTACA
CGACACTGGGATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCCTCAA
GGCAAGACGCTCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGTTGGA
TTTGAATTCCCGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAAGCCA
TTCCCTATGGGAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGACGGG
GAAGTGGACTCGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGTAGCCCG
GGCGCTTCTATTCGAATGCCTTCAACCAGATACGCCACTCATTGGTCATG
CGATCGATAATGACCTCAATGCGTGCCGCATCATTCATCCGACAATCATT
GATACTGTGCTCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTATGAG
CTTGAAGACTCTATGCCGAAGACACCTAGATCGAGACATCCAAACGGGAG
GCAGCAGCGGCCATGACTCAAAGGAAGACTCGATCGCTACGGGTGATCTG
GTGAGGGTCAAGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAGGCTG
GCGCATACATAACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCGGAAG
CTGCAGCAGCACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCGGGCA
AGCTCGGCGTTGGGAGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
REX3M747DRAFT_45415Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45415-T1.utr5p1M747DRAFT_45415-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45415-T1.exon1M747DRAFT_45415-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45415-T1.cdsM747DRAFT_45415-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45415-T1.utr3p1M747DRAFT_45415-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45415-T1M747DRAFT_45415-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR034922
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR013520
ProductRNA exonuclease 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:299685..302177 +
Powered by Drupal