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M747DRAFT_45442-T1, M747DRAFT_45442-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_45442-T1
Unique NameM747DRAFT_45442-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:304923..306492+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_45442-T1 ID=M747DRAFT_45442-T1|Name=M747DRAFT_45442-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1570bp|location=Sequence derived from alignment at KZ851916.1:304923..306492+ (Aspergillus niger ATCC 13496)
TCAGCTTTGTTTCCCTGACGTAACATTCATCAACTCATCTCTCCCACATC
GCGAATCCCATTCAATTATCATCCACCACAACATATCAGATAATAAACAA
ATAATCCATCATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGA
TTGACGAGGAGGCCGCGGTCCGCGATGTAAGTTGACCCGTGCCCGCGCCA
AGCGCAGAGACAAAACCGAAAGCAAAGCGCCGTTGTGTTAACAAGATGTA
CAGGAGCTTCACGATATTGTGCAGACGCTTGCTAGAAAGGGTACTTACCT
ACTTACCTATCCCTATATGAATTCTCAGAATTGGGATTATCTCGATTTGA
GATTCGTCGACTGACTATTAGGATCGGATTATAGGAAGATCTACCCAGGC
TATTCTTTCGCGAGCTCATTCTACTCCCACTGATCAGTGTATGATTGACT
CCTCTCTTCATATCCTGATGACTGCTTAGGCGAAACAGCTAATATGGACA
GTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGA
TGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGT
ACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTGCGTGCCCCTTCT
GTTACTGGGGTTTGTTTATTGCAGACGAGAGCTAATCAGCCAATCAACAG
GTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAA
GACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCC
TGGGTGGTAGGTTCTCACTTCCTTGTATTCATTAACAGTTTCGAATTGTG
TAGTGGATTCGATTCTAATGATGATGATATCTAGTCCCCGTGAATCTCAA
AGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGA
TTTCCATGGTCGAGGAGCTGGTCAGTTTCTCCGTGCCCCATATTGATTTG
TTATTGGACTACTATTTGCTGATAGAAGATGTGGCAGGCCCGTCTGGCTG
TCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAAC
TTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGA
TATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTAAGTTTCTATC
TGTGAGGTTGTAGATTATGGGATGCTAATGCGCTGGTACAGGTTAAGAAG
GTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGG
TAGCGCTGCGGCGTAAATTAAACACAGAGACTTAAATTAGCATATGATAT
GAACATGAAATAACGACACTGTCCAGGGCACGGCAGTTGAAGAGTTTCGT
TTCGCAACCCCACTCTCCTAGAGTAATGTAACAACCATTATATAATACTC
AGTATATAAAAGACAGCAGCTGCAACAGCAGCTGCATGGTATCATCCCAA
CCAAACACCCGTTCTCTCACACAGATATAATATAAATATTAATATAGTAC
TTCCTCCGACACACACACTA
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Coding sequence (CDS) from alignment at KZ851916.1:304923..306492+

>M747DRAFT_45442-T1 ID=M747DRAFT_45442-T1|Name=M747DRAFT_45442-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5664bp|location=Sequence derived from alignment at KZ851916.1:304923..306492+ (Aspergillus niger ATCC 13496)
ATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGA
GGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGAA
AGGGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTACTCCCACT
GATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCA
GAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTT
ACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCG
ATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAG
CTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGTCC
CCGTGAATCTCAAAGAACAGGATGCCTTCCATCTCACTATTGAGGAGTAT
TTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAA
CTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCA
TCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATT
TTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGA
TGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTG
CGGCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATT
GACGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCT
TGCTAGAAAGGGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTA
CTCCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATC
ATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCA
CCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTG
TCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAG
ACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCT
GGGTGTCCCCGTGAATCTCAAAGAACAGGATGCCTTCCATCTCACTATTG
AGGAGTATTTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTG
GCTGTCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGG
CAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGA
ATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAG
GTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGG
TAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGG
CCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTG
CAGACGCTTGCTAGAAAGGGAAGATCTACCCAGGCTATTCTTTCGCGAGC
TCATTCTACTCCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCA
AGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCG
GACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCA
GAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAG
AGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGA
AATTTCCTGGGTGTCCCCGTGAATCTCAAAGAACAGGATGCCTTCCATCT
CACTATTGAGGAGTATTTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGG
CCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTG
CAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAA
CCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTG
TTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATT
CCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAACATCTTCGAAGA
CCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGAGCTTCACG
ATATTGTGCAGACGCTTGCTAGAAAGGGAAGATCTACCCAGGCTATTCTT
TCGCGAGCTCATTCTACTCCCACTGATCAGTTGAAACCCGTTCTCGATGA
CGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCGGTTGAAGA
CTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGTGGACGCGC
GAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGGCTAGGCGG
ACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGACGATAGAAG
AGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCTCAAAGAACAGGATGCC
TTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCCATGGTCGA
GGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGACTATACCC
GGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGGGCTTCCAG
TTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGATGGAATTAA
ATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTCTTTGCGCA
ATTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATCACAACATC
TTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTCCGCGATGA
GCTTCACGATATTGTGCAGACGCTTGCTAGAAAGGGAAGATCTACCCAGG
CTATTCTTTCGCGAGCTCATTCTACTCCCACTGATCAGTTGAAACCCGTT
CTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAAGTATCTCG
GTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAATGGGGTGT
GGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCTGCGCTTGG
CTAGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCGTTTCTGAC
GATAGAAGAGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCTCAAAGAAC
AGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGCTGATTTCC
ATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACTCTGGGTGA
CTATACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTTGTTTGCGG
GCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGAGGAGTGAT
GGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTACGATCTCTC
TTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCGGCGTAAATGATCGATC
ACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGGCCGCGGTC
CGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGAAAGGGAAGATC
TACCCAGGCTATTCTTTCGCGAGCTCATTCTACTCCCACTGATCAGTTGA
AACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGAGGGATGAA
GTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTACAAGTACAA
TGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGATCGAGCTCT
GCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAGCTCCTCTTCG
TTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGTCCCCGTGAATCT
CAAAGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTTGCTTGCGC
TGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACTCGGTCACT
CTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCATCAAGGATTT
GTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTTGCGGAAGA
GGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATGTCGTTTAC
GATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCGGCGTAAAT
GATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGACGAGGAGG
CCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTGCTAGAAAG
GGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTACTCCCACTGA
TCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCATCGCCCAGA
GGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACCCGTTTTAC
AAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTCTCGTCGAT
CGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGACGAACAGCT
CCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGGGTGTCCCC
GTGAATCTCAAAGAACAGGATGCCTTCCATCTCACTATTGAGGAGTATTT
GCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGCTGTCAACT
CGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCAACTTCATC
AAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAATGATATTTT
GCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGTGGAGGATG
TCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTAGCGCTGCG
GCGTAAATGATCGATCACAACATCTTCGAAGACCTGCAGGCCAAGATTGA
CGAGGAGGCCGCGGTCCGCGATGAGCTTCACGATATTGTGCAGACGCTTG
CTAGAAAGGGAAGATCTACCCAGGCTATTCTTTCGCGAGCTCATTCTACT
CCCACTGATCAGTTGAAACCCGTTCTCGATGACGCAACCAAGGAGATCAT
CGCCCAGAGGGATGAAGTATCTCGGTTGAAGACTGTGGCGGACAAGCACC
CGTTTTACAAGTACAATGGGGTGTGGACGCGCGAGTTGCAGAACCTTGTC
TCGTCGATCGAGCTCTGCGCTTGGCTAGGCGGACTGGAAGAGTACAAGAC
GAACAGCTCCTCTTCGTTTCTGACGATAGAAGAGGTTGGAAATTTCCTGG
GTGTCCCCGTGAATCTCAAAGAACAGGATGCCTTCCATCTCACTATTGAG
GAGTATTTGCTTGCGCTGATTTCCATGGTCGAGGAGCTGGCCCGTCTGGC
TGTCAACTCGGTCACTCTGGGTGACTATACCCGGCCGGTGCAAATTGGCA
ACTTCATCAAGGATTTGTTTGCGGGCTTCCAGTTGCTGAACCTGAAGAAT
GATATTTTGCGGAAGAGGAGTGATGGAATTAAATACAGTGTTAAGAAGGT
GGAGGATGTCGTTTACGATCTCTCTTTGCGCAATTTGATTCCCAAGGGTA
GCGCTGCGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016070RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003697single-stranded DNA binding
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_45442M747DRAFT_45442Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45442-T1M747DRAFT_45442-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45442-T1.utr5p1M747DRAFT_45442-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45442-T1.exon1M747DRAFT_45442-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon2M747DRAFT_45442-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon3M747DRAFT_45442-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon4M747DRAFT_45442-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon5M747DRAFT_45442-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon6M747DRAFT_45442-T1.exon6Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon7M747DRAFT_45442-T1.exon7Aspergillus niger ATCC 13496exon
M747DRAFT_45442-T1.exon8M747DRAFT_45442-T1.exon8Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45442-T1.cdsM747DRAFT_45442-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_45442-T1.utr3p1M747DRAFT_45442-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036081
DBxrefInterPro:IPR033956
DBxrefInterPro:IPR016068
DBxrefInterPro:IPR002848
DBxrefInterPro:IPR016069
DBxrefPFAM:PF01997
Productrecombination hotspot-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:304923..306492 +
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