You are here

Home

M747DRAFT_49720-T1, M747DRAFT_49720-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_49720-T1
Unique NameM747DRAFT_49720-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:513061..514138-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_49720-T1 ID=M747DRAFT_49720-T1|Name=M747DRAFT_49720-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1078bp|location=Sequence derived from alignment at KZ851917.1:513061..514138- (Aspergillus niger ATCC 13496)
TCCGTCCCGCTGGCTCTCCATCACTCGGAGGCTGCCGATGCGGGGACTCA
TTGAAGCAGCATATATCCATCAACCTCCCAGTGTAACTATCACCGTGTGG
TTTTTTCCAACGAAAATCGACCAAGATACTTCTGCTCGAAATATTACCTT
CAGCTCGTAATTTTTTGTCAATTATCCTCCTTCCACGACTCCCCGCTCAT
CATGTCCTCCGATCTCCCCTCACCATCGTCAATTACATCACTCCCGCAGG
AGCAGCAATTCCGCGTCCTGGATACCCTGTTCGAGTCGTCGCCTGAGCTG
CATACTCTCATGGCCCCCGTTCTCGCAAACCAGACATTCTCCTCCTACGC
CACCCTGATTGATGCTGTTGGCGGTCGCATGTCTGCTCTGTCTGCTGCCA
ACTCGTCCAAGGACCGCGATATTCTAGTGGGGATTCTGGGATCGCATCCC
CGCCTGGGACAGCCCAAGGGAGCTCCGACAGAGCACTTGAGCGAACTGAG
CAAGAAGGAACAAGCGAATCTGAATACCGGAGCAGAGGAACAAGCGGAGA
AGCTGAAACGTATGAATGCTGAGTACGAGCAAAAGTTCCCTGGCTTGCGG
TTTGTGTATGTTCTCTCAGTATACCCAACGACTTGTGTTGGTCTGACATA
TCTCCCTGGCATAGTACTTTTGTAAACGGTCGCAACCGGGATGTCATCAT
GGAGGAGATGCGTGAGAGGATTGACCGGGGCAATGCCGATCGTGAGGTGG
AGGAGATTATACAGGTGAGATGGCTGTCTACCCAAACACGGAGCAGTGCT
GACAGTTCGCTCCTTTAAAGGCAATGTGCGATATTGCAAAGGATCGGGCG
CGGAAACTGGAGCAGTCCGCTAAGATATAGTTCACATACTGCAAGCATAT
ATTTAAACAATGAATACCCTTCGATTTCAGCAGGCGCTGCGACATCTCCT
TGCTGAATCGCTGCTTTACAAGCCATATTTCGGTCCATGCGATTCATCTA
TGGAGCACTCTGCCTCTGTCCGGAAACAATGGCTGGTAATCTGCATGGAA
CTTGGTGATTCCGTTAGTATAAAGTGAC
back to top

Coding sequence (CDS) from alignment at KZ851917.1:513061..514138-

>M747DRAFT_49720-T1 ID=M747DRAFT_49720-T1|Name=M747DRAFT_49720-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1692bp|location=Sequence derived from alignment at KZ851917.1:513061..514138- (Aspergillus niger ATCC 13496)
GCAATGTGCGATATTGCAAAGGATCGGGCGCGGAAACTGGAGCAGTCCGC
TAAGATATAGTACTTTTGTAAACGGTCGCAACCGGGATGTCATCATGGAG
GAGATGCGTGAGAGGATTGACCGGGGCAATGCCGATCGTGAGGTGGAGGA
GATTATACAGATGTCCTCCGATCTCCCCTCACCATCGTCAATTACATCAC
TCCCGCAGGAGCAGCAATTCCGCGTCCTGGATACCCTGTTCGAGTCGTCG
CCTGAGCTGCATACTCTCATGGCCCCCGTTCTCGCAAACCAGACATTCTC
CTCCTACGCCACCCTGATTGATGCTGTTGGCGGTCGCATGTCTGCTCTGT
CTGCTGCCAACTCGTCCAAGGACCGCGATATTCTAGTGGGGATTCTGGGA
TCGCATCCCCGCCTGGGACAGCCCAAGGGAGCTCCGACAGAGCACTTGAG
CGAACTGAGCAAGAAGGAACAAGCGAATCTGAATACCGGAGCAGAGGAAC
AAGCGGAGAAGCTGAAACGTATGAATGCTGAGTACGAGCAAAAGTTCCCT
GGCTTGCGGTTTGTGCAATGTGCGATATTGCAAAGGATCGGGCGCGGAAA
CTGGAGCAGTCCGCTAAGATATAGTACTTTTGTAAACGGTCGCAACCGGG
ATGTCATCATGGAGGAGATGCGTGAGAGGATTGACCGGGGCAATGCCGAT
CGTGAGGTGGAGGAGATTATACAGATGTCCTCCGATCTCCCCTCACCATC
GTCAATTACATCACTCCCGCAGGAGCAGCAATTCCGCGTCCTGGATACCC
TGTTCGAGTCGTCGCCTGAGCTGCATACTCTCATGGCCCCCGTTCTCGCA
AACCAGACATTCTCCTCCTACGCCACCCTGATTGATGCTGTTGGCGGTCG
CATGTCTGCTCTGTCTGCTGCCAACTCGTCCAAGGACCGCGATATTCTAG
TGGGGATTCTGGGATCGCATCCCCGCCTGGGACAGCCCAAGGGAGCTCCG
ACAGAGCACTTGAGCGAACTGAGCAAGAAGGAACAAGCGAATCTGAATAC
CGGAGCAGAGGAACAAGCGGAGAAGCTGAAACGTATGAATGCTGAGTACG
AGCAAAAGTTCCCTGGCTTGCGGTTTGTGCAATGTGCGATATTGCAAAGG
ATCGGGCGCGGAAACTGGAGCAGTCCGCTAAGATATAGTACTTTTGTAAA
CGGTCGCAACCGGGATGTCATCATGGAGGAGATGCGTGAGAGGATTGACC
GGGGCAATGCCGATCGTGAGGTGGAGGAGATTATACAGATGTCCTCCGAT
CTCCCCTCACCATCGTCAATTACATCACTCCCGCAGGAGCAGCAATTCCG
CGTCCTGGATACCCTGTTCGAGTCGTCGCCTGAGCTGCATACTCTCATGG
CCCCCGTTCTCGCAAACCAGACATTCTCCTCCTACGCCACCCTGATTGAT
GCTGTTGGCGGTCGCATGTCTGCTCTGTCTGCTGCCAACTCGTCCAAGGA
CCGCGATATTCTAGTGGGGATTCTGGGATCGCATCCCCGCCTGGGACAGC
CCAAGGGAGCTCCGACAGAGCACTTGAGCGAACTGAGCAAGAAGGAACAA
GCGAATCTGAATACCGGAGCAGAGGAACAAGCGGAGAAGCTGAAACGTAT
GAATGCTGAGTACGAGCAAAAGTTCCCTGGCTTGCGGTTTGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_49720M747DRAFT_49720Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_49720-T1M747DRAFT_49720-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_49720-T1.cdsM747DRAFT_49720-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_49720-T1.utr3p1M747DRAFT_49720-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_49720-T1.exon3M747DRAFT_49720-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_49720-T1.exon2M747DRAFT_49720-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_49720-T1.exon1M747DRAFT_49720-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_49720-T1.utr5p1M747DRAFT_49720-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036778
DBxrefInterPro:IPR018020
DBxrefPFAM:PF09349
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:513061..514138 -
Powered by Drupal