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M747DRAFT_50004-T1, M747DRAFT_50004-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_50004-T1
Unique NameM747DRAFT_50004-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:573816..575088-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_50004-T1 ID=M747DRAFT_50004-T1|Name=M747DRAFT_50004-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1273bp|location=Sequence derived from alignment at KZ851917.1:573816..575088- (Aspergillus niger ATCC 13496)
TCATTAGACCCGCCGTTGCTGTGGACTGCCCTTTAGGCGCCTTTGCTTTG
CGCGAAACCCCCGACGACCTGGGCCCCGACTCTTGTCGTCTTGTCTCTTT
CTGCAAAAGAAATTTGTGTTGCTGCTCCTTCGACCCGCTGTCACAGCTCC
TGTTGGGATAGCTTCCATTACCGCTTCTCTCTCTCTCTTCCCCTCCTCCC
CTTCCCTTCCCTCACGGCATAATTCACGCCAGATCCTACCAGAATGGCTT
CCAAGGTAAGCCTTGTCGCTGCGCTTTCCAATTTCCGTCATTAGCTTCCA
TGTGCCTCCTGTCAACCTCCCTTCCCGACCGACTTTCTCTCATGATCTCC
GCACACTGCCTCACCCCGGAAAATGGACGATTCGCTCACCTCTCGGTCGC
ATATAGTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGGTGGTGT
CGGAAAGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCGTGGATG
AATATGACCCGACAATTGAAGGTGGGCGCTGAGCTCTACTGTAGCTTTCC
CGACCGTGTGGCTCATGTTTCGATCGTGTTTATACAGATTCCTACCGCAA
GCAGTGCGTTATCGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTG
CCGGACAGGAGGAGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGC
GAAGGCTTCCTTCTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGA
AATCATGACTTTCCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACT
TTCCCATCATCGTGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCT
GTTTCCGAAGAAGGTGGGTTTCCCGGCCCAGCATCTGCTTGCCGGGGGAG
GATGTGGCTGACGGTTCTTTCTTTACTTTACAGAGGGTGAGGCTCTAGCA
CGGCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCGTATTAA
CGTCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGTTCAACA
AAGAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCG
GAAGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGG
AAAATGTATAATTATGTAATGGGACAGGCGTTGGATCTAAAAGAAATACA
TACAGGTCGAGATACGGAAGGAAAGCAAAAACACATACATTCACTCCCGG
CTGGAAAGAGAGGTCAGCAACAG
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Coding sequence (CDS) from alignment at KZ851917.1:573816..575088-

>M747DRAFT_50004-T1 ID=M747DRAFT_50004-T1|Name=M747DRAFT_50004-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2556bp|location=Sequence derived from alignment at KZ851917.1:573816..575088- (Aspergillus niger ATCC 13496)
AGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCC
GCCAAGTCCCGTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGA
GATCCGTCGGTTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCG
GCGGCTCACGCGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGAT
GACGCCGGCTGCTGTGGAAAATGTATAATTATGTAAATTCCTACCGCAAG
CAGTGCGTTATCGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTGC
CGGACAGGAGGAGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGCG
AAGGCTTCCTTCTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGAA
ATCATGACTTTCCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACTT
TCCCATCATCGTGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCTG
TTTCCGAAGAAGTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGG
TGGTGTCGGAAAGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCG
TGGATGAATATGACCCGACAATTGAAGATGGCTTCCAAGAGGGTGAGGCT
CTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCG
TATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGT
TCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGC
GCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTG
CTGTGGAAAATGTATAATTATGTAAATTCCTACCGCAAGCAGTGCGTTAT
CGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGAGG
AGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCCTT
CTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGAAATCATGACTTT
CCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCATCG
TGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAGAA
GTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAA
AGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATAT
GACCCGACAATTGAAGATGGCTTCCAAGAGGGTGAGGCTCTAGCACGGCA
GTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCGTATTAACGTCG
AGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAAGAG
ATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGAAGG
AAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAAAAT
GTATAATTATGTAAATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGG
TGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCG
ATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTC
GATAACGTCGCGCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGA
TCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAAC
AAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAGAAGTTCTTAAGAG
AATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTG
ACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATATGACCCGACAAT
TGAAGATGGCTTCCAAGAGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCA
AGTTCATCGAGACATCCGCCAAGTCCCGTATTAACGTCGAGAACGCTTTC
TACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAAGAGATGTCATCGTA
CCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGAAGGAAAAATGGACG
TCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAAAATGTATAATTATG
TAAATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGTTG
GACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAACA
GTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTCGC
GCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAGTC
AAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGATTT
AGAAAAGGAGAGGGCTGTTTCCGAAGAAGTTCTTAAGAGAATACAAACTC
GTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTGACTATTCAATT
GATCCAGAGCCACTTCGTGGATGAATATGACCCGACAATTGAAGATGGCT
TCCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_50004M747DRAFT_50004Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50004-T1M747DRAFT_50004-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50004-T1.cdsM747DRAFT_50004-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50004-T1.utr3p1M747DRAFT_50004-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50004-T1.exon4M747DRAFT_50004-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_50004-T1.exon3M747DRAFT_50004-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_50004-T1.exon2M747DRAFT_50004-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_50004-T1.exon1M747DRAFT_50004-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50004-T1.utr5p1M747DRAFT_50004-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
Productras small monomeric GTPase rasa
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:573816..575088 -
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