You are here

Home

M747DRAFT_50572-T1, M747DRAFT_50572-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_50572-T1
Unique NameM747DRAFT_50572-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:76330..77681+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_50572-T1 ID=M747DRAFT_50572-T1|Name=M747DRAFT_50572-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1352bp|location=Sequence derived from alignment at KZ851900.1:76330..77681+ (Aspergillus niger ATCC 13496)
ATTTCAATTCCGACCTGCTAGATCCAAAGGATTCCAATTAAGTGGCCCAC
CTAGCTTAAAACGGGAACCTTGAACGAGTACGGAATTTCCTCATATAGAA
GCTTTGCCCATTCCCCCCCGATCCTGGCCGCTAGACACCAAAGTGAGTCT
ATTGGCGAGCCGGGCGAGCTTGGCTGTCTCTTTCGCCCACAGATGCCGTC
ATGCTCACAAATTGTCAGTCTTGGACTTGGACTCTCAGTATTTATAGATT
CCCATGAGACCCGACCGCCTAACAGTCTAGGCGATCTAGTTGTTCGCTTG
TCATCCTCCTAAGTACCTACACCATTTCACGTCATCAAATTATGGCCTGC
GACGCCTGCAAGTCAGGGTTTCGTTGGCAAGGAACCCCGGTGGGCTCCGA
AATCACGCTGAACGGCAACCCCACGTATGTGACTGGCGACTCCAAATCAG
CCGCGATCTTGATGATCCACGATATCTTTGGTTGGACATTGCCTAATGTG
CGGCTTCTGGCTGATCACTATGCTCAAGAAGCGAATGCCACCGTCTACCT
TCCGGATTTGTAGCCTACCCTACCTCCCCATGATCATTCACCTTCCCCCC
TCCACCCAAAAGTATGTGTTCACCAGGCTAATCCGTGAACTACTAGTTTC
GGTGGCGAGATTGTCCCACCCGAGATCTTAGACGATCCAGAGAAGAAGGA
GGCTTTCAATGTGCCTGCTTTTATCGAGCGTAACTCGAAAGACCAACGCT
TCCCGGACATCCTCGCGTGTGCCCAAGCTCTGAAATCCGCGTATCCCAAA
GTGGGCGCCATCGGGTTCTGTTACGGCGGCTGGGCCGTCTTCCAGCTGGC
GGCACGCGGTCCAGAGTTGTTGAGTTGTATCTCCACGGCACACCCAACCT
TTTTGACCGAGAAAGAGATTGCTGCGGGACGCGTCCCTGCCCAGATCCTG
GCGCCAGAACATGATCATCGTTTGACTCCAGAGCTGAAGGAATTCTGCAA
CCGTGTAATCCCGGAGCTGGGCCTGCCCTATGAATATGTCTACTTTCCCA
AAATGTCTCATGGATTCGCAGTCAGAGCGGATCTGAACGACGAGTTGCAG
AAAGCGGGGCTCGCGAGGGCAAAGCGAGCGGCGGTTCACTGGTTCAATGA
GTGGCTACACTAATCAATGGGCAAGCTTCGTTTGGTGGTATCCGAGTCTA
GCTATAGCGTCTCGGCGTTGCCCGACTGGATGGCTTCAAGGTCGGTCAGC
TGTTAAGATGGTTCCTGACAGTGGGCTAGTGTAGCATCGCATTGTTGTAC
CAGACTGAGTGTGCAGAGCTAGGGCGTGATATAGAGCTGTGATATATAGG
AC
back to top

Coding sequence (CDS) from alignment at KZ851900.1:76330..77681+

>M747DRAFT_50572-T1 ID=M747DRAFT_50572-T1|Name=M747DRAFT_50572-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1470bp|location=Sequence derived from alignment at KZ851900.1:76330..77681+ (Aspergillus niger ATCC 13496)
ATGGCCTGCGACGCCTGCAAGTCAGGGTTTCGTTGGCAAGGAACCCCGGT
GGGCTCCGAAATCACGCTGAACGGCAACCCCACGTATGTGACTGGCGACT
CCAAATCAGCCGCGATCTTGATGATCCACGATATCTTTGGTTGGACATTG
CCTAATGTGCGGCTTCTGGCTGATCACTATGCTCAAGAAGCGAATGCCAC
CGTCTACCTTCCGGATTTTTTCGGTGGCGAGATTGTCCCACCCGAGATCT
TAGACGATCCAGAGAAGAAGGAGGCTTTCAATGTGCCTGCTTTTATCGAG
CGTAACTCGAAAGACCAACGCTTCCCGGACATCCTCGCGTGTGCCCAAGC
TCTGAAATCCGCGTATCCCAAAGTGGGCGCCATCGGGTTCTGTTACGGCG
GCTGGGCCGTCTTCCAGCTGGCGGCACGCGGTCCAGAGTTGTTGAGTTGT
ATCTCCACGGCACACCCAACCTTTTTGACCGAGAAAGAGATTGCTGCGGG
ACGCGTCCCTGCCCAGATCCTGGCGCCAGAACATGATCATCGTTTGACTC
CAGAGCTGAAGGAATTCTGCAACCGTGTAATCCCGGAGCTGGGCCTGCCC
TATGAATATGTCTACTTTCCCAAAATGTCTCATGGATTCGCAGTCAGAGC
GGATCTGAACGACGAGTTGCAGAAAGCGGGGCTCGCGAGGGCAAAGCGAG
CGGCGGTTCACTGGTTCAATGAGTGGCTACACTAAATGGCCTGCGACGCC
TGCAAGTCAGGGTTTCGTTGGCAAGGAACCCCGGTGGGCTCCGAAATCAC
GCTGAACGGCAACCCCACGTATGTGACTGGCGACTCCAAATCAGCCGCGA
TCTTGATGATCCACGATATCTTTGGTTGGACATTGCCTAATGTGCGGCTT
CTGGCTGATCACTATGCTCAAGAAGCGAATGCCACCGTCTACCTTCCGGA
TTTTTTCGGTGGCGAGATTGTCCCACCCGAGATCTTAGACGATCCAGAGA
AGAAGGAGGCTTTCAATGTGCCTGCTTTTATCGAGCGTAACTCGAAAGAC
CAACGCTTCCCGGACATCCTCGCGTGTGCCCAAGCTCTGAAATCCGCGTA
TCCCAAAGTGGGCGCCATCGGGTTCTGTTACGGCGGCTGGGCCGTCTTCC
AGCTGGCGGCACGCGGTCCAGAGTTGTTGAGTTGTATCTCCACGGCACAC
CCAACCTTTTTGACCGAGAAAGAGATTGCTGCGGGACGCGTCCCTGCCCA
GATCCTGGCGCCAGAACATGATCATCGTTTGACTCCAGAGCTGAAGGAAT
TCTGCAACCGTGTAATCCCGGAGCTGGGCCTGCCCTATGAATATGTCTAC
TTTCCCAAAATGTCTCATGGATTCGCAGTCAGAGCGGATCTGAACGACGA
GTTGCAGAAAGCGGGGCTCGCGAGGGCAAAGCGAGCGGCGGTTCACTGGT
TCAATGAGTGGCTACACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_50572M747DRAFT_50572Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50572-T1M747DRAFT_50572-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50572-T1.utr5p1M747DRAFT_50572-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_50572-T1.utr5p2M747DRAFT_50572-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50572-T1.exon1M747DRAFT_50572-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_50572-T1.exon2M747DRAFT_50572-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_50572-T1.exon3M747DRAFT_50572-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50572-T1.cdsM747DRAFT_50572-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_50572-T1.utr3p1M747DRAFT_50572-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519001.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR002925
DBxrefInterPro:IPR029058
DBxrefPFAM:PF01738
Product4-beta-D-glucanase
Product3-1
Productendo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:76330..77681 +
Powered by Drupal