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M747DRAFT_54699-T1, M747DRAFT_54699-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_54699-T1
Unique NameM747DRAFT_54699-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:941274..942217+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_54699-T1 ID=M747DRAFT_54699-T1|Name=M747DRAFT_54699-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=944bp|location=Sequence derived from alignment at KZ851900.1:941274..942217+ (Aspergillus niger ATCC 13496)
GCAGCAATGCAATGGCTACCTGCCTTTCCACATACACCGACCTTCTGCTT
TATGCCCGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACC
CCGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAAC
AACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGAT
GTTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAGTGCGTTATACC
TGTTCACTTGGCCCCCATGGGCTTATCTCACAAATGGAGACGGGCGCAAC
CTGACAGTGGTTTCCAGAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGA
AGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGGTATGCGCCGCATG
ATAGATGAATACCGGTTGATGATATATATCTGACTGTGCGACTCTTGCTA
TGTGACTGCTGCAGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTAT
ATGCCGGCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGG
GGTGAGAATGTCTTGCTTCTGGGTGAAATCGTACGCAAACCTTCCATGCA
TCTTCTTCGCTATTCATGTTTAGGGCGGGGAGTTGGCTAATTGGTGTGTC
TTGCTTCTCCGGGTTACAGGATCTCGACAAAGAAGATGACATTCCCCCTC
ATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAA
GACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGAC
GCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGACACGAT
GTCTGCTTCAGTCTTTCTCCCTTTTCTACATCCGTGCTAGATCTGTCGCG
TCCCAACTAGGGAATTCTAAAGCGACGCGACACAAGACACTTGG
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Coding sequence (CDS) from alignment at KZ851900.1:941274..942217+

>M747DRAFT_54699-T1 ID=M747DRAFT_54699-T1|Name=M747DRAFT_54699-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2364bp|location=Sequence derived from alignment at KZ851900.1:941274..942217+ (Aspergillus niger ATCC 13496)
ATGCAATGGCTACCTGCCTTTCCACATACACCGACCTTCTGCTTTATGCC
CGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCG
GTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACG
CTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCAC
CACCGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCTAGTCC
TTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTC
GCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCT
CTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCT
TGCTTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATTCCCCCTCAT
ATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGA
CGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACGC
TGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGATGCAATGG
CTACCTGCCTTTCCACATACACCGACCTTCTGCTTTATGCCCGCCTCTGA
CATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACC
ATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCC
ATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGC
TCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTCGAGACG
GGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCAAACCTT
GTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCTCTACGCCGA
TATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCTGG
GTGAAATCGATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGC
GCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCG
AAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTG
AGCCGGAGCATAGCGGAGAGATACTGTTTTAGATGCAATGGCTACCTGCC
TTTCCACATACACCGACCTTCTGCTTTATGCCCGCCTCTGACATAAATAT
GGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAATG
CGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGCAA
GGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTGTT
GGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAAGT
TGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCAAACCTTGTCCTTCAG
GATACCATTGAACGTCTATATGCCGGCAACCTCTACGCCGATATCCCGCG
AGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCTGGGTGAAATCG
ATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGTTC
CAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTTGG
CGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGAGC
ATAGCGGAGAGATACTGTTTTAGATGCAATGGCTACCTGCCTTTCCACAT
ACACCGACCTTCTGCTTTATGCCCGCCTCTGACATAAATATGGAACGCCT
TCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAATGCGCCGCAGG
GCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGCAAGGTCCCCCG
CAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTGTTGGATTTGAC
AGATAAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAAGTTGATCGGAG
TTTTGAGAAGCTGGGATCAGTTCGCAAACCTTGTCCTTCAGGATACCATT
GAACGTCTATATGCCGGCAACCTCTACGCCGATATCCCGCGAGGTATATT
TCTCGTCCGGGGTGAGAATGTCTTGCTTCTGGGTGAAATCGATCTCGACA
AAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGTTCCAGGAAGTG
TTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTTGGCGACAAGAA
GCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGAGCATAGCGGAG
AGATACTGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_54699M747DRAFT_54699Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_54699-T1M747DRAFT_54699-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_54699-T1.utr5p1M747DRAFT_54699-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_54699-T1.exon1M747DRAFT_54699-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_54699-T1.exon2M747DRAFT_54699-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_54699-T1.exon3M747DRAFT_54699-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_54699-T1.exon4M747DRAFT_54699-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_54699-T1.cdsM747DRAFT_54699-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_54699-T1.utr3p1M747DRAFT_54699-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034104
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Productsmall nuclear ribonucleo protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:941274..942217 +
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