You are here

Home

M747DRAFT_5612-T1, M747DRAFT_5612-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_5612-T1
Unique NameM747DRAFT_5612-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1132861..1134525-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_5612-T1 ID=M747DRAFT_5612-T1|Name=M747DRAFT_5612-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1665bp|location=Sequence derived from alignment at KZ851899.1:1132861..1134525- (Aspergillus niger ATCC 13496)
GGCCGCGCCGTTCAAAATTAGTATACACAAGAAAAAAGTGGAAGCAAGAA
AAAACTTCTCCCGCCACGGCCTGCCGTCCACCCGACTAACAAAGTCCTCA
AGGACCACCTCCTAATTGCTCACCGGATTATAAATACTAGGATAGACCAT
CACCATCAGGGCGCTTTTCCCCTTACGTTCCCCAAGATCATTCTTTGACT
CTGTTCTCTCTTCATACTCTCAGCTTCATTAATCCTGCCAGATCTATCCG
TTCGCGGCAGACATATCCACATCAAACAATGGGTCTCACCCAGGAACAAA
CTGACATCATCAAGGCCACTGTGCCTGTGATTAAGGAGCATGGCAACGCC
GTCACCAGCGTCTTCTACAAGAACATGCTCGCCGCACACCCCGAGCTGAA
TGCCATCTTCAACTCCTCCAACCAAGTCAACGGCCACCAACCCCGCGCCC
TCGCCGGCGCTGTCTTCGCCTACGCCGCCAACATTGACAACCTTGGTGCT
CTCGGCCCCGCTGTCGAACTCATCTGCAACAAGCATGCCTCCCTCTATAT
CCAGCCCGAGCACTATAACATCGTCGGAAAGTTCTTGCTCGAAGCCATGG
GCGAGGTCCTTGGGGACGCCTTCACCCCCGCCATCAAGGACGCGTGGGCG
GCCGCTTACTTCCAACTCGCTGACATCATGATCAACCGCGAAGCTGCCCT
GTACAACGAGGCCGACGGATGGACCGAGTTCCGCGATTTCCGCATTGCCA
AGAAGGTTCCTGAATCCTCTGAGATCACCTCCTTCTACCTCGAACCTGTC
GATGGCAAGCCCCTGCCCTCTTTCCGTCCCGGACAATACATCTCCATCCA
GCTCTTCGTCCCCCAACTCAACCACCCTCAAGCCAGACAATACTCTCTCA
GTGACAAGCCTCGCTCCGACTACTACCGGATCTCCGTGAAGAAGGAGGCT
GGTCTCGATGCCACCGAACCGGGTGCGGAGGCCCACCCTGGCCTCGTGTC
GAACATCCTGCACGATCTCAAGAAGGAAGGCGACATCATTAAGGTGTCAC
ACCCCCAGGGTGACTTCTTCCTGTCCGATGCGGAGAAGCAGAGCTCCAGC
CCCATCGTTCTCTTGGCAGCCGGTGTGGGTCTGACCCCGCTCACCTCGAT
TCTGAACACCGTCCTCGAGACCGAATCTGAGACCCAGCGCAAAATCTCCT
TCGTTCATGGCGCCCGCACCTCGGCCGCCCGTGCCTTCAAGCCCCAGATC
CGCGAGCTCGCCACCAAGGTGCCTAACCTGCAGGCCTTCTTCTTCACCAG
CCACCCGGCTGCCGAGGACAAGCAGGGTGAAGACTACGACTTTGCCGGTC
GGCTGGACCTCAGCAAGCTGGACGCTAAGAGGGACTTGTTCCTGGACGAT
GCCACAACGCAGTACTACGTGTGCGGTCCCGAGTCGTTCATGCTGGACGT
GAAGAACAAGCTGGCTGCCGAGGGAGTGAGCGCGGACCGCATCAAGATGG
AGCTGTTTGGCACTGGTGGTGTGCCCGCTTGATTGCATCATCAACAAAGA
TAGATTGCATACACTTATCTGCTACCGATACAGATAGAGTAGAGCTTTGC
ATTATGGGTTACGACTGCATGGGTTAACCTTTGTATATATTTTATAGTTC
TTTAATACCCTCCAC
back to top

Coding sequence (CDS) from alignment at KZ851899.1:1132861..1134525-

>M747DRAFT_5612-T1 ID=M747DRAFT_5612-T1|Name=M747DRAFT_5612-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1254bp|location=Sequence derived from alignment at KZ851899.1:1132861..1134525- (Aspergillus niger ATCC 13496)
ATGGGTCTCACCCAGGAACAAACTGACATCATCAAGGCCACTGTGCCTGT
GATTAAGGAGCATGGCAACGCCGTCACCAGCGTCTTCTACAAGAACATGC
TCGCCGCACACCCCGAGCTGAATGCCATCTTCAACTCCTCCAACCAAGTC
AACGGCCACCAACCCCGCGCCCTCGCCGGCGCTGTCTTCGCCTACGCCGC
CAACATTGACAACCTTGGTGCTCTCGGCCCCGCTGTCGAACTCATCTGCA
ACAAGCATGCCTCCCTCTATATCCAGCCCGAGCACTATAACATCGTCGGA
AAGTTCTTGCTCGAAGCCATGGGCGAGGTCCTTGGGGACGCCTTCACCCC
CGCCATCAAGGACGCGTGGGCGGCCGCTTACTTCCAACTCGCTGACATCA
TGATCAACCGCGAAGCTGCCCTGTACAACGAGGCCGACGGATGGACCGAG
TTCCGCGATTTCCGCATTGCCAAGAAGGTTCCTGAATCCTCTGAGATCAC
CTCCTTCTACCTCGAACCTGTCGATGGCAAGCCCCTGCCCTCTTTCCGTC
CCGGACAATACATCTCCATCCAGCTCTTCGTCCCCCAACTCAACCACCCT
CAAGCCAGACAATACTCTCTCAGTGACAAGCCTCGCTCCGACTACTACCG
GATCTCCGTGAAGAAGGAGGCTGGTCTCGATGCCACCGAACCGGGTGCGG
AGGCCCACCCTGGCCTCGTGTCGAACATCCTGCACGATCTCAAGAAGGAA
GGCGACATCATTAAGGTGTCACACCCCCAGGGTGACTTCTTCCTGTCCGA
TGCGGAGAAGCAGAGCTCCAGCCCCATCGTTCTCTTGGCAGCCGGTGTGG
GTCTGACCCCGCTCACCTCGATTCTGAACACCGTCCTCGAGACCGAATCT
GAGACCCAGCGCAAAATCTCCTTCGTTCATGGCGCCCGCACCTCGGCCGC
CCGTGCCTTCAAGCCCCAGATCCGCGAGCTCGCCACCAAGGTGCCTAACC
TGCAGGCCTTCTTCTTCACCAGCCACCCGGCTGCCGAGGACAAGCAGGGT
GAAGACTACGACTTTGCCGGTCGGCTGGACCTCAGCAAGCTGGACGCTAA
GAGGGACTTGTTCCTGGACGATGCCACAACGCAGTACTACGTGTGCGGTC
CCGAGTCGTTCATGCTGGACGTGAAGAACAAGCTGGCTGCCGAGGGAGTG
AGCGCGGACCGCATCAAGATGGAGCTGTTTGGCACTGGTGGTGTGCCCGC
TTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0019825oxygen binding
GO:0020037heme binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_5612M747DRAFT_5612Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5612-T1.cdsM747DRAFT_5612-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5612-T1.utr3p1M747DRAFT_5612-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5612-T1.exon1M747DRAFT_5612-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5612-T1.utr5p1M747DRAFT_5612-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5612-T1M747DRAFT_5612-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009050
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR017927
DBxrefInterPro:IPR000971
DBxrefInterPro:IPR001433
DBxrefInterPro:IPR012292
DBxrefInterPro:IPR039261
DBxrefPFAM:PF00175
DBxrefPFAM:PF00042
Productglobin-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1132861..1134525 -
Powered by Drupal