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M747DRAFT_64157-T1, M747DRAFT_64157-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_64157-T1
Unique NameM747DRAFT_64157-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851919.1:580414..581503-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_64157-T1 ID=M747DRAFT_64157-T1|Name=M747DRAFT_64157-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1090bp|location=Sequence derived from alignment at KZ851919.1:580414..581503- (Aspergillus niger ATCC 13496)
GCCATTCCCTCAGCCCCGCCTCCAATTCCGCAAAGCAACGAGGGGCACAT
TTCTCCAAGACAACCACCTTCCTCATACAAGACAACCAACCCGAAAATAC
CAGCCAACATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATT
GAGGACACAATAGCGGCCTTTAGTGAGTCCCCCAGCTCCAGAACTTCCCA
CCCGCGCCGGCGCGGGAGGCAAATCCATCCCACCACATTCATTACACATA
CAAACAACATCCATGTAACTAACAAGCACACCAATGCACCAGAGAACGGC
GAATTCATCATCGTGCTCGATTCCCAAGACCGCGAAAATGAAGGCGATCT
CATCATTGCCGCTGACTCCATCACTCCGGCGCAGATGGCTTTCCTTGTTC
GCCACACAAGGTAAATCCCCCATTTCCCCCACCTCCTTTCCCCACGAGCA
CATCAAATGTTACTTAACGGGATCACCAATGCTAATGATGGATGAATAGT
GGCCTGATATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCT
CCCTCAAATGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCG
TCTCCGTCGACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAA
GACCGCGCTCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGC
GGATCTGCGCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAG
GTGTCAGGGAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGG
TTGGCGGGCAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGG
AGAGGTCGTACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGA
GACGGGATGGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGT
ACGATTGAGGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGC
TGTGAATGGGAACTGAGTGAGTGTTGACTTGTTCCTTTTTATCTGGTTTT
CTTTTCTTCATCGCCTCTCTTGCATATCTTTCTCTTCGAT
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Coding sequence (CDS) from alignment at KZ851919.1:580414..581503-

>M747DRAFT_64157-T1 ID=M747DRAFT_64157-T1|Name=M747DRAFT_64157-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2097bp|location=Sequence derived from alignment at KZ851919.1:580414..581503- (Aspergillus niger ATCC 13496)
TGGCCTGATATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCC
TCCCTCAAATGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACC
GTCTCCGTCGACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACA
AGACCGCGCTCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAG
CGGATCTGCGCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGA
GGTGTCAGGGAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCG
GTTGGCGGGCAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATG
GAGAGGTCGTACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATG
AGACGGGATGGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATG
TACGATTGAGGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCG
CTGTGAATGGGAACTGAAGAACGGCGAATTCATCATCGTGCTCGATTCCC
AAGACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACT
CCGGCGCAGATGGCTTTCCTTGTTCGCCACACAAGATGCATTCCCCTTTG
GATCCAACCCTTCAATTCGACTCTATTGAGGACACAATAGCGGCCTTTAT
GGCCTGATATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCT
CCCTCAAATGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCG
TCTCCGTCGACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAA
GACCGCGCTCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGC
GGATCTGCGCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAG
GTGTCAGGGAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGG
TTGGCGGGCAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGG
AGAGGTCGTACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGA
GACGGGATGGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGT
ACGATTGAGGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGC
TGTGAATGGGAACTGAAGAACGGCGAATTCATCATCGTGCTCGATTCCCA
AGACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTC
CGGCGCAGATGGCTTTCCTTGTTCGCCACACAAGATGCATTCCCCTTTGG
ATCCAACCCTTCAATTCGACTCTATTGAGGACACAATAGCGGCCTTTATG
GCCTGATATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCTC
CCTCAAATGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCGT
CTCCGTCGACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAAG
ACCGCGCTCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGCG
GATCTGCGCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAGG
TGTCAGGGAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGGT
TGGCGGGCAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGGA
GAGGTCGTACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGAG
ACGGGATGGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTA
CGATTGAGGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCT
GTGAATGGGAACTGAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAA
GACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCC
GGCGCAGATGGCTTTCCTTGTTCGCCACACAAGATGCATTCCCCTTTGGA
TCCAACCCTTCAATTCGACTCTATTGAGGACACAATAGCGGCCTTTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00086863,4-dihydroxy-2-butanone-4-phosphate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RIB3M747DRAFT_64157Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_64157-T1M747DRAFT_64157-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_64157-T1.cdsM747DRAFT_64157-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_64157-T1.utr3p1M747DRAFT_64157-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_64157-T1.exon3M747DRAFT_64157-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_64157-T1.exon2M747DRAFT_64157-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_64157-T1.exon1M747DRAFT_64157-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_64157-T1.utr5p1M747DRAFT_64157-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263Z8I
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR000422
DBxrefPFAM:PF00926
Product4-dihydroxy 2-butanone 4-phosphate synthase
Product3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851919.1supercontigKZ851919.1:580414..581503 -
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