You are here

M747DRAFT_65573-T1, M747DRAFT_65573-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_65573-T1
Unique NameM747DRAFT_65573-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:181240..182069-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_65573-T1 ID=M747DRAFT_65573-T1|Name=M747DRAFT_65573-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=830bp|location=Sequence derived from alignment at KZ851920.1:181240..182069- (Aspergillus niger ATCC 13496)
CCAACTATAACAATGAACTACCCCTCCCTCGGCCCATCACATCCCCCAAT TCGGGCCATCATCACCCCGAATCCACATAAAAGCATACATATACACCACC ATACCATCATCCCCTATCCTCACTTCCCAGCATTCATACTTTACCCAGCA TTGAACCTCTCTCTCAATCCACCTCCCCGATCCACCAACTGCAAAAATGC CCACTCGCCGCATCGCCCAAATCGTCCACCTCAAGCCGTCCGCCATCGCC GCATACAAAGAATGTCACGCGAACGTATGGCCCGAAGTTCTGCAGCAGAT CAAGGAGTGTAATATTTGCGATTGTACATTTTTTCCCCCAGAATTCTCTC AATTATATATATATATATATATATATAAAACAAGTGTAAAAGCTAATATG GGGCTATGTGCAGATTCTATATTCTTCGATAATGAGCGGACGCTGTTCGC AACATTCAAGTATGTGGGAGAGGACTTTGAGGGGGATATGCAGCGCATGA AGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTTTGACGGATGGGATGCAG GTATGTTCATCATTCAATCACTTTATCGAGATGAAGAGGAAGTCAGTGAT GCTTACATACTATTGTGTGTAGGAGAGTCCAGTGCCTGGGGCTGTTGGAA GTGCTGAAGGTCCTGGGTGGTGGAAGGTATTGGACGAGGTATTCTATACT GAATAAATTGTACGAATATTGCATTTCCTTCTTTTTCCCACTTCTCACAG GTATAGAAATACATAAAACTACTTAACGGATCTCATTCGGATCCCATATA CAAGCCATGCAACAATGGGTATCTTCGCCG
back to top

Coding sequence (CDS) from alignment at KZ851920.1:181240..182069-

>M747DRAFT_65573-T1 ID=M747DRAFT_65573-T1|Name=M747DRAFT_65573-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1044bp|location=Sequence derived from alignment at KZ851920.1:181240..182069- (Aspergillus niger ATCC 13496)
GAGAGTCCAGTGCCTGGGGCTGTTGGAAGTGCTGAAGGTCCTGGGTGGTG
GAAGGTATTGGACGAGGTATTCTATACTGAATAAATTCTATATTCTTCGA
TAATGAGCGGACGCTGTTCGCAACATTCAAGTATGTGGGAGAGGACTTTG
AGGGGGATATGCAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGG
GCTTTGACGGATGGGATGCAGATGCCCACTCGCCGCATCGCCCAAATCGT
CCACCTCAAGCCGTCCGCCATCGCCGCATACAAAGAATGTCACGCGAACG
TATGGCCCGAAGTTCTGCAGCAGATCAAGGAGTGTAATATTTGCGATTGA
GAGTCCAGTGCCTGGGGCTGTTGGAAGTGCTGAAGGTCCTGGGTGGTGGA
AGGTATTGGACGAGGTATTCTATACTGAATAAATTCTATATTCTTCGATA
ATGAGCGGACGCTGTTCGCAACATTCAAGTATGTGGGAGAGGACTTTGAG
GGGGATATGCAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGC
TTTGACGGATGGGATGCAGATGCCCACTCGCCGCATCGCCCAAATCGTCC
ACCTCAAGCCGTCCGCCATCGCCGCATACAAAGAATGTCACGCGAACGTA
TGGCCCGAAGTTCTGCAGCAGATCAAGGAGTGTAATATTTGCGATTGAGA
GTCCAGTGCCTGGGGCTGTTGGAAGTGCTGAAGGTCCTGGGTGGTGGAAG
GTATTGGACGAGGTATTCTATACTGAATAAATTCTATATTCTTCGATAAT
GAGCGGACGCTGTTCGCAACATTCAAGTATGTGGGAGAGGACTTTGAGGG
GGATATGCAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTT
TGACGGATGGGATGCAGATGCCCACTCGCCGCATCGCCCAAATCGTCCAC
CTCAAGCCGTCCGCCATCGCCGCATACAAAGAATGTCACGCGAACGTATG
GCCCGAAGTTCTGCAGCAGATCAAGGAGTGTAATATTTGCGATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016857racemase and epimerase activity, acting on carbohydrates and derivatives
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_65573M747DRAFT_65573Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_65573-T1M747DRAFT_65573-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_65573-T1.cdsM747DRAFT_65573-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_65573-T1.utr3p1M747DRAFT_65573-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_65573-T1.exon3M747DRAFT_65573-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_65573-T1.exon2M747DRAFT_65573-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_65573-T1.exon1M747DRAFT_65573-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_65573-T1.utr5p1M747DRAFT_65573-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR008000
DBxrefPFAM:PF05336
Productrhamnose mutarotase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:181240..182069 -