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M747DRAFT_72601-T1, M747DRAFT_72601-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_72601-T1
Unique NameM747DRAFT_72601-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:504695..506760+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_72601-T1 ID=M747DRAFT_72601-T1|Name=M747DRAFT_72601-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2066bp|location=Sequence derived from alignment at KZ851922.1:504695..506760+ (Aspergillus niger ATCC 13496)
GGCTTCTGCTTCTTGGTTTCTGGTCCCGACCTCCAACTCTCCCCATTTGA
ACTCCCTCATCATCGCTCCTCATCTCATTCACTCCTCTTCAACTTTTCCA
TCTCTCATTCCTTCCCCTCCCCTAAACCTTTCATCCACCCGCCAATCTCC
CTAGTGTCGCTTTCCCTCCTTATCTAATAATATTCAGTTTAGCGTTACAG
CGAGTCCCGTGTCGACGCAACACCTCCAACCAGTCAATGAACGATGCGGG
GATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTCGACTCTT
GCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCCCTCCGAC
CGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTGTCCATGT
CAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTCGGGTTCT
ACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGATCCGCCGC
CGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATACACTCAGC
GTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATTCGACGAT
GAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGATGGATGA
CCTCACGCGATCGGAGTATATGAGAGCGAAGGGTAAGTCACTGGCTCTTT
GTCCGCTCCTTTGGGCAAACGACGACCATGGGGTCTTGTAAGACATGACG
TATGTGCATTTGTCGCTGATCTCTCACATAGCATTTATCGAAGCCAATCC
GCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCTCGCGATTC
AAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGGAAATCGCC
AATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGACTCGGAATG
CAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGTCTATTACT
GGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCAGTATTGGG
ATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGTGCGTTCTTGGA
CAACTTGTTTGGGGGAGGATATGGGTTGTCCGCGGTCGCTAATTTTGTTT
CTTATGATGTCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGG
TCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACC
TTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACA
ATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCA
TAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCG
TCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTC
AAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCC
TTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTG
CAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACC
AGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATC
ACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGG
ACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTC
CCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTC
CAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAAC
AGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCAC
AGCGCGCATGCCAACGAGAATCGTTAGAAGGCGACCGAGGTCCTGCAACT
ATTGTTATCGTCTATTCATCAGTTATTGGCGCAGCGTCTCTTTGATGTGT
ATACGGCATGCTTCAGCCACTGGTTCTATTTCTACTACTGTTCCCTTATT
TTAGCGGCCACGGTCG
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Coding sequence (CDS) from alignment at KZ851922.1:504695..506760+

>M747DRAFT_72601-T1 ID=M747DRAFT_72601-T1|Name=M747DRAFT_72601-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4527bp|location=Sequence derived from alignment at KZ851922.1:504695..506760+ (Aspergillus niger ATCC 13496)
ATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTC
GACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCC
CTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTG
TCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTC
GGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGAT
CCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATAC
ACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATT
CGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGA
TGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCATTTATCGAA
GCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCT
CGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGG
AAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGAC
TCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGT
CTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCA
GTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGCTTC
CACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAGGCACAACCA
GCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAGGTGATGTGA
TCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTCACTCGCAAT
GGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCAGAATTTCTT
CCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGAACTTTGGTC
AGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGGGGCCTGGCC
CCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAGCGAGCAAGG
CAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGATTTCTCAAC
GGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACTGTCCGTGTT
GCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGATATATCCCT
GGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCGAAGGATCCA
GTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTGCATACGAAC
GATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGATGGCAGTCG
GAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGATACCCAGCT
ACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCATGCCAACGAG
AATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGA
TGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTT
CTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACAT
GTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGG
CAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTG
CCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTC
TTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACC
GGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCT
TGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCA
TTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTC
TCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAAC
CAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAG
TTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACA
GAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATA
CTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTA
CCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAG
GCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAG
GTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTC
ACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCA
GAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGA
ACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGG
GGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAG
CGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGA
TTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACT
GTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGA
TATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCG
AAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTG
CATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGA
TGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGA
TACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCAT
GCCAACGAGAATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGC
TCTCTTTGATGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCA
CCGCTGCTTCTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAAC
ATTGAACATGTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAG
CGTCAGTGGCAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCG
TCCTCTCTGCCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTT
TTCTTTTTCTTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCAT
CGGCCGACCGGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGG
CGGAAGCCTTGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGA
GCGAAGGCATTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACAT
ATCACTCTCTCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGG
AGTTTCAACCAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACG
GAAATCGAGTTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGT
TCCGAAACAGAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAAC
CTGATAATACTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTG
TTCAAATTACCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGG
TCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACC
TTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACA
ATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCA
TAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCG
TCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTC
AAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCC
TTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTG
CAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACC
AGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATC
ACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGG
ACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTC
CCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTC
CAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAAC
AGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCAC
AGCGCGCATGCCAACGAGAATCGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSH4M747DRAFT_72601Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_72601-T1M747DRAFT_72601-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_72601-T1.utr5p1M747DRAFT_72601-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_72601-T1.exon1M747DRAFT_72601-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_72601-T1.exon2M747DRAFT_72601-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_72601-T1.exon3M747DRAFT_72601-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_72601-T1.cdsM747DRAFT_72601-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_72601-T1.utr3p1M747DRAFT_72601-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR035780
DBxrefInterPro:IPR001870
DBxrefInterPro:IPR003877
DBxrefPFAM:PF00622
Product sorting of cargo proteins at the multivesicular body
ProductRsp5p-dependent ubiquitination
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:504695..506760 +
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