You are here

Home

M747DRAFT_73558-T1, M747DRAFT_73558-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_73558-T1
Unique NameM747DRAFT_73558-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:148409..149530+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_73558-T1 ID=M747DRAFT_73558-T1|Name=M747DRAFT_73558-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1122bp|location=Sequence derived from alignment at KZ851923.1:148409..149530+ (Aspergillus niger ATCC 13496)
CTTCAATCGGAATATCAATCCAAAAGAACATTATACCATCCATACCTGCA
ACAATGATTTCGACCTGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGT
AGTAGTTCTCGGTGGTGGTGTTTTGGGACGTCGCATTGGTATAAAATCCT
GACCCTAGGTTGGCAAACAACACAGGACACGGCTAACCAACTACGCAGCC
TGCATTTGGGCATCAGCAGGCTACAACGTCCACGTCCGTGACCCGAGCCC
CGAGCAGCGCGCCGACTGCATCACCTATGTAAACGAAAATGTCGCCTCAT
ATGCAGTACACACCGGAGCCAAGCCTGGCCCCATTACAGCATTCGAGGAT
CTGGCGCAGGCGATCGAGAATGCGTGGCTCGTTATAGAGTGTGTTCCTGA
GGTGCTCCAACTCAAGATCGACACCTTCGCAGAGCTGGAGAAACATGCTC
CGACAGACTGCATTTTGGCAACCAACTCATCCTCCTATCGCTCCTCGGAA
ATGCTGGAAAAAGTGTCGGAAGCAACCAAGTCCCGTATCTTGAACATGCA
TTACTACATGCCTCCACAGGTCATGGTTGTGGAGCTGATGACGGATGGGC
TTACAGAGCCGTCAATCCTTCAATTTATGGCTGAGCGCTCGAAGGGAGTG
GCCACTAAGCCCTACATTGCGAGGAAGGAGTCTACTGGGTTCATTTTCAA
CCGTCTGTGGGCGGCTGTTAAGCGCGAAACTCTAACGATTCTGGCTGAGG
ATGTTTCTACGCCAAGTGAGATTGACTCTCTATGGACTGAGATGTTTATA
AAGGGGAAGACGCTGCCTTGCGAGATGATGGATGGTATGCCATGCCCTGC
ACCTTGCTAGCTTCGTATTTTACGCTGATTATGTTATTACTGCAGCTGTC
GGGCTTGACACCGTTGCTTTCATCGAAAAGCATTACGTCGCTGAACGAGG
TCTTGATACCGAGAAAACCGTCGACTTTCTCCAAACCAACTACCTTAGCC
AAGGCAAACTGGGGAATAAGTCATCCAAAGGCGGGCTTTATTCGCCAGCG
GAAAAGTTTTGACCTGCTACTATTAGTCCCAGTCCAACTGACTAAATGTT
GACGATTTGACCTCAAGGTTGT
back to top

Coding sequence (CDS) from alignment at KZ851923.1:148409..149530+

>M747DRAFT_73558-T1 ID=M747DRAFT_73558-T1|Name=M747DRAFT_73558-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2664bp|location=Sequence derived from alignment at KZ851923.1:148409..149530+ (Aspergillus niger ATCC 13496)
ATGATTTCGACCTGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGTAGT
AGTTCTCGGTGGTGGTGTTTTGGGACGTCGCATTGCCTGCATTTGGGCAT
CAGCAGGCTACAACGTCCACGTCCGTGACCCGAGCCCCGAGCAGCGCGCC
GACTGCATCACCTATGTAAACGAAAATGTCGCCTCATATGCAGTACACAC
CGGAGCCAAGCCTGGCCCCATTACAGCATTCGAGGATCTGGCGCAGGCGA
TCGAGAATGCGTGGCTCGTTATAGAGTGTGTTCCTGAGGTGCTCCAACTC
AAGATCGACACCTTCGCAGAGCTGGAGAAACATGCTCCGACAGACTGCAT
TTTGGCAACCAACTCATCCTCCTATCGCTCCTCGGAAATGCTGGAAAAAG
TGTCGGAAGCAACCAAGTCCCGTATCTTGAACATGCATTACTACATGCCT
CCACAGGTCATGGTTGTGGAGCTGATGACGGATGGGCTTACAGAGCCGTC
AATCCTTCAATTTATGGCTGAGCGCTCGAAGGGAGTGGCCACTAAGCCCT
ACATTGCGAGGAAGGAGTCTACTGGGTTCATTTTCAACCGTCTGTGGGCG
GCTGTTAAGCGCGAAACTCTAACGATTCTGGCTGAGGATGTTTCTACGCC
AAGTGAGATTGACTCTCTATGGACTGAGATGTTTATAAAGGGGAAGACGC
TGCCTTGCGAGATGATGGATGCTGTCGGGCTTGACACCGTTGCTTTCATC
GAAAAGCATTACGTCGCTGAACGAGGTCTTGATACCGAGAAAACCGTCGA
CTTTCTCCAAACCAACTACCTTAGCCAAGGCAAACTGGGGAATAAGTCAT
CCAAAGGCGGGCTTTATTCGCCAGCGGAAAAGTTTTGAATGATTTCGACC
TGGCAAGCACCGAAGGACTACCGCGAGCGCCCTGTAGTAGTTCTCGGTGG
TGGTGTTTTGGGACGTCGCATTGCCTGCATTTGGGCATCAGCAGGCTACA
ACGTCCACGTCCGTGACCCGAGCCCCGAGCAGCGCGCCGACTGCATCACC
TATGTAAACGAAAATGTCGCCTCATATGCAGTACACACCGGAGCCAAGCC
TGGCCCCATTACAGCATTCGAGGATCTGGCGCAGGCGATCGAGAATGCGT
GGCTCGTTATAGAGTGTGTTCCTGAGGTGCTCCAACTCAAGATCGACACC
TTCGCAGAGCTGGAGAAACATGCTCCGACAGACTGCATTTTGGCAACCAA
CTCATCCTCCTATCGCTCCTCGGAAATGCTGGAAAAAGTGTCGGAAGCAA
CCAAGTCCCGTATCTTGAACATGCATTACTACATGCCTCCACAGGTCATG
GTTGTGGAGCTGATGACGGATGGGCTTACAGAGCCGTCAATCCTTCAATT
TATGGCTGAGCGCTCGAAGGGAGTGGCCACTAAGCCCTACATTGCGAGGA
AGGAGTCTACTGGGTTCATTTTCAACCGTCTGTGGGCGGCTGTTAAGCGC
GAAACTCTAACGATTCTGGCTGAGGATGTTTCTACGCCAAGTGAGATTGA
CTCTCTATGGACTGAGATGTTTATAAAGGGGAAGACGCTGCCTTGCGAGA
TGATGGATGCTGTCGGGCTTGACACCGTTGCTTTCATCGAAAAGCATTAC
GTCGCTGAACGAGGTCTTGATACCGAGAAAACCGTCGACTTTCTCCAAAC
CAACTACCTTAGCCAAGGCAAACTGGGGAATAAGTCATCCAAAGGCGGGC
TTTATTCGCCAGCGGAAAAGTTTTGAATGATTTCGACCTGGCAAGCACCG
AAGGACTACCGCGAGCGCCCTGTAGTAGTTCTCGGTGGTGGTGTTTTGGG
ACGTCGCATTGCCTGCATTTGGGCATCAGCAGGCTACAACGTCCACGTCC
GTGACCCGAGCCCCGAGCAGCGCGCCGACTGCATCACCTATGTAAACGAA
AATGTCGCCTCATATGCAGTACACACCGGAGCCAAGCCTGGCCCCATTAC
AGCATTCGAGGATCTGGCGCAGGCGATCGAGAATGCGTGGCTCGTTATAG
AGTGTGTTCCTGAGGTGCTCCAACTCAAGATCGACACCTTCGCAGAGCTG
GAGAAACATGCTCCGACAGACTGCATTTTGGCAACCAACTCATCCTCCTA
TCGCTCCTCGGAAATGCTGGAAAAAGTGTCGGAAGCAACCAAGTCCCGTA
TCTTGAACATGCATTACTACATGCCTCCACAGGTCATGGTTGTGGAGCTG
ATGACGGATGGGCTTACAGAGCCGTCAATCCTTCAATTTATGGCTGAGCG
CTCGAAGGGAGTGGCCACTAAGCCCTACATTGCGAGGAAGGAGTCTACTG
GGTTCATTTTCAACCGTCTGTGGGCGGCTGTTAAGCGCGAAACTCTAACG
ATTCTGGCTGAGGATGTTTCTACGCCAAGTGAGATTGACTCTCTATGGAC
TGAGATGTTTATAAAGGGGAAGACGCTGCCTTGCGAGATGATGGATGCTG
TCGGGCTTGACACCGTTGCTTTCATCGAAAAGCATTACGTCGCTGAACGA
GGTCTTGATACCGAGAAAACCGTCGACTTTCTCCAAACCAACTACCTTAG
CCAAGGCAAACTGGGGAATAAGTCATCCAAAGGCGGGCTTTATTCGCCAG
CGGAAAAGTTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_73558M747DRAFT_73558Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_73558-T1M747DRAFT_73558-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_73558-T1.utr5p1M747DRAFT_73558-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_73558-T1.exon1M747DRAFT_73558-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_73558-T1.exon2M747DRAFT_73558-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_73558-T1.exon3M747DRAFT_73558-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_73558-T1.cdsM747DRAFT_73558-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_73558-T1.utr3p1M747DRAFT_73558-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR022694
DBxrefInterPro:IPR006176
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
ProductNAD(P)-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:148409..149530 +
Powered by Drupal