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M747DRAFT_87621-T1, M747DRAFT_87621-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_87621-T1
Unique NameM747DRAFT_87621-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:189900..191401+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_87621-T1 ID=M747DRAFT_87621-T1|Name=M747DRAFT_87621-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1502bp|location=Sequence derived from alignment at KZ851901.1:189900..191401+ (Aspergillus niger ATCC 13496)
TCCGTAAATGGCTTAGCGTATCAGTTTCCCGCCTCAGGCACCTGTTGTTG
CCAAGCCCGACATCAAAAGTTCGAGCGGAAGATTCCCTTGAACCAGCTGC
GATAGAACAGGACTCCGGCCAACACAAGACAGTATGATTGTTCGGCAACT
TGTGCGGCAAAGTGAGTTACTCCATGGATTGGGTTTATTGATAGGAAATA
TTGATGCTGATTCCCCCGTCCCCATCTAGGCCGCCAGCTTCGGGCTCTTC
CCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGACGACTGGC
CAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAATTAGAGAC
GCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAG
AGAGATTGGATCCGAACACGCTCCGCCGTAAGTACCGCAATATTCTAGCT
GTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAATATACATCCTCTGGTTC
AGGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGC
CAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAA
ATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAA
CCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCA
TCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTG
GAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAA
GGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATC
ACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATC
TTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGA
TGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACC
TTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGT
GGTCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCC
TACCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCG
TGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGG
AGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGA
GCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGAC
AGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTC
GAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAGAGTCGAAGTGT
TGCCTATTGCTCTTATTGATATCTGTCTGCCTACATCTGAACTTTCGGCT
TGGGATTGTATTGTATAGGACATTGTAAATTTTCATTTTCTCTGGTGTTA
TA
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Coding sequence (CDS) from alignment at KZ851901.1:189900..191401+

>M747DRAFT_87621-T1 ID=M747DRAFT_87621-T1|Name=M747DRAFT_87621-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3339bp|location=Sequence derived from alignment at KZ851901.1:189900..191401+ (Aspergillus niger ATCC 13496)
ATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGCTTCGGGCTCTTCC
CCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGACGACTGGCC
AGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAATTAGAGACG
CCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGA
GAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGC
TTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACG
GAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACC
TCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGT
CTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTC
CACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCT
CAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCA
ACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCG
CGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATCTCCCTTGATGT
GACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCT
ACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGT
GCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCG
TTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCG
AAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAA
GAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTT
GAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACG
TCCCGACTATCGGTATCATCGACACCGACGCCGACCCTACCCGTGTCACA
TACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGC
TGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGA
GAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGCCACTCCGTGTC
CAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGC
CTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGG
AAGAGGCTTCCAAGGATGACGAATAGATGATTGTTCGGCAACTTGTGCGG
CAAAGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCG
ATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTG
CGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGG
GAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCG
CCGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGC
CAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAA
ATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAA
CCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCA
TCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTG
GAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAA
GGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATC
ACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATC
TTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGA
TGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACC
TTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGT
GGTCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCC
TACCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCG
TGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGG
AGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGA
GCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGAC
AGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTC
GAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_87621M747DRAFT_87621Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87621-T1M747DRAFT_87621-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87621-T1.utr5p1M747DRAFT_87621-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87621-T1.exon1M747DRAFT_87621-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_87621-T1.exon2M747DRAFT_87621-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_87621-T1.exon3M747DRAFT_87621-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87621-T1.cdsM747DRAFT_87621-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87621-T1.utr3p1M747DRAFT_87621-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263J7D
DBxrefInterPro:IPR023591
DBxrefInterPro:IPR005706
DBxrefInterPro:IPR001865
DBxrefPFAM:PF00318
Productribosomal protein S2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:189900..191401 +
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