You are here

Home

M747DRAFT_89902-T1, M747DRAFT_89902-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_89902-T1
Unique NameM747DRAFT_89902-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:514666..516420-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_89902-T1 ID=M747DRAFT_89902-T1|Name=M747DRAFT_89902-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1755bp|location=Sequence derived from alignment at KZ851901.1:514666..516420- (Aspergillus niger ATCC 13496)
CAGATCTGGGAGACGGCTTGTCGTTTGCTTGCGGTCAATTGACAGCCAGC
GTGTTCAGCCTCCGTTTACTTAAACCAGGCGAATTCCATTCTATCCGGTC
CTGGCTTCCCATAGACGGCATTGTTCTATCCCAGCCTTCTGATATTTTTC
GCTGAATACTCTACGGAACCGTATCTTCAATATGTTTGTGGAAAGCGCAA
AGAAGGCGCTTTTGGCGTTGTCTCTTTTGGCTGCTAGTGCACAAGCTGTG
CCACGAGTGTAAGTGTGCCGGATACATCAAGTCCCCTTCTGTTCATAGTC
ATTGGCTTACTGTTGAGTATAGCCGCCGGCAAGGCGCCTCGAGCTCCTTT
GATTACAAGAGCCAGATAGTCCGAGGTGTCAATCTGGGCGGCTGGCTGGT
GACCGAGCCTTGGATTACACCTTCACTCTATGACAGTACTGGAGGTGGTG
CGGTAGATGAATGGACACTGTGTCAGATATTGGGTAAAGATGAAGCCCAG
GCTAAATTGTCGTCTCACTGGAGCTCGTTCATCACGCAAAGTGACTTTGA
CCGTATGGCTCAGGCAGGACTGAATCATGTCCGCATTCCTATTGGATACT
GGGCCGTTGCTCCCATTGATGGTGAGCCGTATGTCAGCGGTCAGATCGAC
TATCTCGACCAGGCGGTCACCTGGGCTAGAGCTGCTGGCCTCAAAGTTCT
TGTTGATCTGCACGGTGGTAAGTTATGTGCTTTCTCGTGCATCTCATCTT
TGGGTCTTCTGACAAAAACATAGCACCGGGCTCTCAAAACGGATTTGACA
ATAGTGGACATCGAGGTCCCATCCAGTGGCAGCAAGGGGACACAGTCAAC
CAAACTATGACCGCATTCGATGCTCTTGCAAGGCGCTACGCTCAGTCCGA
TACCGTCACGGCGATCGAGGCCGTCAACGAACCCAACATCCCCGGTGGGG
TAAACGAGGATGGCCTCAAGAACTACTACTACGGCGCTTTGGCTGATGTC
CAGCGTCTCAACCCCTCTACTACTTTGTTCATGTCGGACGGCTTCCAGCC
TGTGGAGTCCTGGAACGGGTTCATGCAAGGTAGCAATGTTGTCATGGATA
CGCATCACTATCAAGTCTTTGACACCGGCTTGCTTTCCATGAGCATCGAT
GACCATGTCAAAACGGCGTGTTCTCTCGCCACACAACACACAATGCAATC
AGACAAGCCTGTCGTCGTGGGTGAGTGGACCGGTGCTCTAACCGATTGTG
CCAAGTATCTCAACGGCGTTGGTAATGCCGCTCGCTACGATGGCACATAC
ATGTCCACCACCAAGTATGGTGACTGCACCGGCAAGAGTACTGGTTCTGT
GGCTGACTTCTCAGCTGATGAGAAAGCGAATACCCGTCGCTACATTGAGG
CTCAGTTGGAGGCTTACGAGATGAAGAGTGGATGGCTCTTCTGGACTTGG
AAGACCGAGGGTGCCCCGGGATGGGACATGCAAGACCTTCTCGCTAACCA
ACTCTTTCCTACCTCCCCTACTGATAGACAATACCCTCATCAGTGCTCTT
GAAAGACTAATTTGGCGATTGAGCGTTTGGATATTACTCCTCAAGATATC
CTTTGTCATTCTTTCATATGCGTTATGATTCATAGTTGGGGCTTATCCCC
TCTCGTGCTGATGTTTGTTGAGACCTGCACTGCTTATCCCTTTCTTCCTT
GCTCTTCCTCTACACTACTTAAGCAACAAGATCAGTCTCGCATGGTAATT
TCATT
back to top

Coding sequence (CDS) from alignment at KZ851901.1:514666..516420-

>M747DRAFT_89902-T1 ID=M747DRAFT_89902-T1|Name=M747DRAFT_89902-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3753bp|location=Sequence derived from alignment at KZ851901.1:514666..516420- (Aspergillus niger ATCC 13496)
CACCGGGCTCTCAAAACGGATTTGACAATAGTGGACATCGAGGTCCCATC
CAGTGGCAGCAAGGGGACACAGTCAACCAAACTATGACCGCATTCGATGC
TCTTGCAAGGCGCTACGCTCAGTCCGATACCGTCACGGCGATCGAGGCCG
TCAACGAACCCAACATCCCCGGTGGGGTAAACGAGGATGGCCTCAAGAAC
TACTACTACGGCGCTTTGGCTGATGTCCAGCGTCTCAACCCCTCTACTAC
TTTGTTCATGTCGGACGGCTTCCAGCCTGTGGAGTCCTGGAACGGGTTCA
TGCAAGGTAGCAATGTTGTCATGGATACGCATCACTATCAAGTCTTTGAC
ACCGGCTTGCTTTCCATGAGCATCGATGACCATGTCAAAACGGCGTGTTC
TCTCGCCACACAACACACAATGCAATCAGACAAGCCTGTCGTCGTGGGTG
AGTGGACCGGTGCTCTAACCGATTGTGCCAAGTATCTCAACGGCGTTGGT
AATGCCGCTCGCTACGATGGCACATACATGTCCACCACCAAGTATGGTGA
CTGCACCGGCAAGAGTACTGGTTCTGTGGCTGACTTCTCAGCTGATGAGA
AAGCGAATACCCGTCGCTACATTGAGGCTCAGTTGGAGGCTTACGAGATG
AAGAGTGGATGGCTCTTCTGGACTTGGAAGACCGAGGGTGCCCCGGGATG
GGACATGCAAGACCTTCTCGCTAACCAACTCTTTCCTACCTCCCCTACTG
ATAGACAATACCCTCATCAGTGCTCTTGACCGCCGGCAAGGCGCCTCGAG
CTCCTTTGATTACAAGAGCCAGATAGTCCGAGGTGTCAATCTGGGCGGCT
GGCTGGTGACCGAGCCTTGGATTACACCTTCACTCTATGACAGTACTGGA
GGTGGTGCGGTAGATGAATGGACACTGTGTCAGATATTGGGTAAAGATGA
AGCCCAGGCTAAATTGTCGTCTCACTGGAGCTCGTTCATCACGCAAAGTG
ACTTTGACCGTATGGCTCAGGCAGGACTGAATCATGTCCGCATTCCTATT
GGATACTGGGCCGTTGCTCCCATTGATGGTGAGCCGTATGTCAGCGGTCA
GATCGACTATCTCGACCAGGCGGTCACCTGGGCTAGAGCTGCTGGCCTCA
AAGTTCTTGTTGATCTGCACGGTGATGTTTGTGGAAAGCGCAAAGAAGGC
GCTTTTGGCGTTGTCTCTTTTGGCTGCTAGTGCACAAGCTGTGCCACGAG
TCACCGGGCTCTCAAAACGGATTTGACAATAGTGGACATCGAGGTCCCAT
CCAGTGGCAGCAAGGGGACACAGTCAACCAAACTATGACCGCATTCGATG
CTCTTGCAAGGCGCTACGCTCAGTCCGATACCGTCACGGCGATCGAGGCC
GTCAACGAACCCAACATCCCCGGTGGGGTAAACGAGGATGGCCTCAAGAA
CTACTACTACGGCGCTTTGGCTGATGTCCAGCGTCTCAACCCCTCTACTA
CTTTGTTCATGTCGGACGGCTTCCAGCCTGTGGAGTCCTGGAACGGGTTC
ATGCAAGGTAGCAATGTTGTCATGGATACGCATCACTATCAAGTCTTTGA
CACCGGCTTGCTTTCCATGAGCATCGATGACCATGTCAAAACGGCGTGTT
CTCTCGCCACACAACACACAATGCAATCAGACAAGCCTGTCGTCGTGGGT
GAGTGGACCGGTGCTCTAACCGATTGTGCCAAGTATCTCAACGGCGTTGG
TAATGCCGCTCGCTACGATGGCACATACATGTCCACCACCAAGTATGGTG
ACTGCACCGGCAAGAGTACTGGTTCTGTGGCTGACTTCTCAGCTGATGAG
AAAGCGAATACCCGTCGCTACATTGAGGCTCAGTTGGAGGCTTACGAGAT
GAAGAGTGGATGGCTCTTCTGGACTTGGAAGACCGAGGGTGCCCCGGGAT
GGGACATGCAAGACCTTCTCGCTAACCAACTCTTTCCTACCTCCCCTACT
GATAGACAATACCCTCATCAGTGCTCTTGACCGCCGGCAAGGCGCCTCGA
GCTCCTTTGATTACAAGAGCCAGATAGTCCGAGGTGTCAATCTGGGCGGC
TGGCTGGTGACCGAGCCTTGGATTACACCTTCACTCTATGACAGTACTGG
AGGTGGTGCGGTAGATGAATGGACACTGTGTCAGATATTGGGTAAAGATG
AAGCCCAGGCTAAATTGTCGTCTCACTGGAGCTCGTTCATCACGCAAAGT
GACTTTGACCGTATGGCTCAGGCAGGACTGAATCATGTCCGCATTCCTAT
TGGATACTGGGCCGTTGCTCCCATTGATGGTGAGCCGTATGTCAGCGGTC
AGATCGACTATCTCGACCAGGCGGTCACCTGGGCTAGAGCTGCTGGCCTC
AAAGTTCTTGTTGATCTGCACGGTGATGTTTGTGGAAAGCGCAAAGAAGG
CGCTTTTGGCGTTGTCTCTTTTGGCTGCTAGTGCACAAGCTGTGCCACGA
GTCACCGGGCTCTCAAAACGGATTTGACAATAGTGGACATCGAGGTCCCA
TCCAGTGGCAGCAAGGGGACACAGTCAACCAAACTATGACCGCATTCGAT
GCTCTTGCAAGGCGCTACGCTCAGTCCGATACCGTCACGGCGATCGAGGC
CGTCAACGAACCCAACATCCCCGGTGGGGTAAACGAGGATGGCCTCAAGA
ACTACTACTACGGCGCTTTGGCTGATGTCCAGCGTCTCAACCCCTCTACT
ACTTTGTTCATGTCGGACGGCTTCCAGCCTGTGGAGTCCTGGAACGGGTT
CATGCAAGGTAGCAATGTTGTCATGGATACGCATCACTATCAAGTCTTTG
ACACCGGCTTGCTTTCCATGAGCATCGATGACCATGTCAAAACGGCGTGT
TCTCTCGCCACACAACACACAATGCAATCAGACAAGCCTGTCGTCGTGGG
TGAGTGGACCGGTGCTCTAACCGATTGTGCCAAGTATCTCAACGGCGTTG
GTAATGCCGCTCGCTACGATGGCACATACATGTCCACCACCAAGTATGGT
GACTGCACCGGCAAGAGTACTGGTTCTGTGGCTGACTTCTCAGCTGATGA
GAAAGCGAATACCCGTCGCTACATTGAGGCTCAGTTGGAGGCTTACGAGA
TGAAGAGTGGATGGCTCTTCTGGACTTGGAAGACCGAGGGTGCCCCGGGA
TGGGACATGCAAGACCTTCTCGCTAACCAACTCTTTCCTACCTCCCCTAC
TGATAGACAATACCCTCATCAGTGCTCTTGACCGCCGGCAAGGCGCCTCG
AGCTCCTTTGATTACAAGAGCCAGATAGTCCGAGGTGTCAATCTGGGCGG
CTGGCTGGTGACCGAGCCTTGGATTACACCTTCACTCTATGACAGTACTG
GAGGTGGTGCGGTAGATGAATGGACACTGTGTCAGATATTGGGTAAAGAT
GAAGCCCAGGCTAAATTGTCGTCTCACTGGAGCTCGTTCATCACGCAAAG
TGACTTTGACCGTATGGCTCAGGCAGGACTGAATCATGTCCGCATTCCTA
TTGGATACTGGGCCGTTGCTCCCATTGATGGTGAGCCGTATGTCAGCGGT
CAGATCGACTATCTCGACCAGGCGGTCACCTGGGCTAGAGCTGCTGGCCT
CAAAGTTCTTGTTGATCTGCACGGTGATGTTTGTGGAAAGCGCAAAGAAG
GCGCTTTTGGCGTTGTCTCTTTTGGCTGCTAGTGCACAAGCTGTGCCACG
AGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_89902M747DRAFT_89902Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_89902-T1M747DRAFT_89902-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_89902-T1.cdsM747DRAFT_89902-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_89902-T1.utr3p1M747DRAFT_89902-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_89902-T1.exon3M747DRAFT_89902-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_89902-T1.exon2M747DRAFT_89902-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_89902-T1.exon1M747DRAFT_89902-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_89902-T1.utr5p1M747DRAFT_89902-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:GH5_39
NoteCAZy:GH5_23
NoteCAZy:GH5_46
NoteCAZy:GH5_22
NoteCAZy:GH5_49
NoteCAZy:GH5_15
NoteCAZy:GH5_50
NoteCAZy:GH5_45
NoteCAZy:GH5_14
NoteCAZy:GH5
NoteCAZy:GH5_9
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001547
DBxrefPFAM:PF00150
Product3-beta-glucosidase A
Productputative glucan 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:514666..516420 -
Powered by Drupal