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M747DRAFT_96083-T1, M747DRAFT_96083-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_96083-T1
Unique NameM747DRAFT_96083-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:380408..381946-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_96083-T1 ID=M747DRAFT_96083-T1|Name=M747DRAFT_96083-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1539bp|location=Sequence derived from alignment at KZ851928.1:380408..381946- (Aspergillus niger ATCC 13496)
CTAGCATCAACGGTCCTTTGTGCTCATTCAATATCAGTATTATCGCTCTT
TCATTAGACTGCTATAATTTCAGCGAATACACCGCCGTACTCCTCCCACC
GAGCCATCTCTCACGCGCATCGCGCCACCTGCGCGCATCCGACTTGAGCT
TATTTCGCTTGCAAAGAGCAGTTGCTCTTTGAATACCAAAATGCCCAAAT
ATAAGTCATATCCTCCCCTTTTGATGAAACCTTGATACTGACAGTCACTT
TACTCTTTTGTAGGACCACCCCAAGCCCTTCAACACCCACCCGCAGACTT
GTCCATCGCGCATGCAATTCCTTCCACCCTCCTATCCAGCCATTATCTCC
GGAGTCACATCCCCACTGACCGATGTATCCAATCGAATATAGGCGACTAC
TGCGATGTCTACCTCACGCACGACTCGATGAGCGTGCGCAAGGCGCACAA
CGCCGGACGTAACCACCTCAGAAACGTGCTGGAATACTACCAACGTACGG
CGGCCCCATTCGCCTCAGACCATCTCAATGCGTGCTGCTAACGCGACACT
AGAAATCGGACAAGAAAAGGCCCAATCGGTCATCGATTCCATCACCTCGT
CCTACGCCGCCGAAGGCCAGGCTGTCCCGAATCCCGCAATGGCTCCCCCG
GGGGCTTACCCTCCTCCATTTGGCTTCCCTGGTATGTCACATCGCCACCT
ACTACACCTTCAGCAACAATCAAAGCAATCCACAAGCTAACTACTGACAT
TCAGGCCGACCAGGTCAACTCCCTCCACCTCCCTTTGGAATGCCTCCTCT
GGGCGCACCCGGCGCACCGGGCATGCCTCGTACGTTGCACCTATCCCCCA
CAAAGCAAACCAACACCATGAGTACCTAACCTTCATGAAAACAGCCCCCG
GAGCAAGAGGTCTCCCCTTTCCACCCCCCTTCCCCGGTCCAGCAGGCGCC
GCCCCTCCTGCCGGTCTCCCCCCTCTCCCCAACATGCCCCCCGGTGCCCA
GGGCTTCCCTCCTCTGCCTGGCGGATTCCCTCCGAACTTCCCGACCCCTC
CCCCTGGTGCTGCTGCTGCCGGGTTCCCCCCCATCCCTCCCCCAGGTCAA
GCTCCAGCAGGATACAGCCCCAGTCCTACGCCCGGTATAGCTGGACCGCC
GGGACAGGATGGTGGTTACGCACCACCGCCCGGTATGGGCGCCGGTTTGC
CTGGTCCGCCTCCGGGATTGGGTGACAAGCGGTGATGGCAGGATTTATCT
TATGTGTATCTGTATCATGTGCCGCTTGGTTGATTTTTTACGGAGGGGGT
TGTTTTTCTTTCCTATTTTCAATTTCTCTATTTGTTTTGTCTAGACCCCG
CTTTCTTCTGATTTTGAAGTGATTCCATACCAGCGTTCTATCTATGGGGA
ATTCGGTCATGCAATATTTCTTTCTTTTGTCTGATTGAAAGGAAGAAAAA
GTTGGTAAATCAACAGAATATGAATAAAAGGATTTATTGGATGGATGGGT
TCTCTATTCACTTAGTCATGATGCATAGTTAAGTCGTAG
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Coding sequence (CDS) from alignment at KZ851928.1:380408..381946-

>M747DRAFT_96083-T1 ID=M747DRAFT_96083-T1|Name=M747DRAFT_96083-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2448bp|location=Sequence derived from alignment at KZ851928.1:380408..381946- (Aspergillus niger ATCC 13496)
CCCCCGGAGCAAGAGGTCTCCCCTTTCCACCCCCCTTCCCCGGTCCAGCA
GGCGCCGCCCCTCCTGCCGGTCTCCCCCCTCTCCCCAACATGCCCCCCGG
TGCCCAGGGCTTCCCTCCTCTGCCTGGCGGATTCCCTCCGAACTTCCCGA
CCCCTCCCCCTGGTGCTGCTGCTGCCGGGTTCCCCCCCATCCCTCCCCCA
GGTCAAGCTCCAGCAGGATACAGCCCCAGTCCTACGCCCGGTATAGCTGG
ACCGCCGGGACAGGATGGTGGTTACGCACCACCGCCCGGTATGGGCGCCG
GTTTGCCTGGTCCGCCTCCGGGATTGGGTGACAAGCGGTGAGCCGACCAG
GTCAACTCCCTCCACCTCCCTTTGGAATGCCTCCTCTGGGCGCACCCGGC
GCACCGGGCATGCCTCAAATCGGACAAGAAAAGGCCCAATCGGTCATCGA
TTCCATCACCTCGTCCTACGCCGCCGAAGGCCAGGCTGTCCCGAATCCCG
CAATGGCTCCCCCGGGGGCTTACCCTCCTCCATTTGGCTTCCCTGATGAG
CGTGCGCAAGGCGCACAACGCCGGACGTAACCACCTCAGAAACGTGCTGG
AATACTACCAACCCCCCGGAGCAAGAGGTCTCCCCTTTCCACCCCCCTTC
CCCGGTCCAGCAGGCGCCGCCCCTCCTGCCGGTCTCCCCCCTCTCCCCAA
CATGCCCCCCGGTGCCCAGGGCTTCCCTCCTCTGCCTGGCGGATTCCCTC
CGAACTTCCCGACCCCTCCCCCTGGTGCTGCTGCTGCCGGGTTCCCCCCC
ATCCCTCCCCCAGGTCAAGCTCCAGCAGGATACAGCCCCAGTCCTACGCC
CGGTATAGCTGGACCGCCGGGACAGGATGGTGGTTACGCACCACCGCCCG
GTATGGGCGCCGGTTTGCCTGGTCCGCCTCCGGGATTGGGTGACAAGCGG
TGAGCCGACCAGGTCAACTCCCTCCACCTCCCTTTGGAATGCCTCCTCTG
GGCGCACCCGGCGCACCGGGCATGCCTCAAATCGGACAAGAAAAGGCCCA
ATCGGTCATCGATTCCATCACCTCGTCCTACGCCGCCGAAGGCCAGGCTG
TCCCGAATCCCGCAATGGCTCCCCCGGGGGCTTACCCTCCTCCATTTGGC
TTCCCTGATGAGCGTGCGCAAGGCGCACAACGCCGGACGTAACCACCTCA
GAAACGTGCTGGAATACTACCAACCCCCCGGAGCAAGAGGTCTCCCCTTT
CCACCCCCCTTCCCCGGTCCAGCAGGCGCCGCCCCTCCTGCCGGTCTCCC
CCCTCTCCCCAACATGCCCCCCGGTGCCCAGGGCTTCCCTCCTCTGCCTG
GCGGATTCCCTCCGAACTTCCCGACCCCTCCCCCTGGTGCTGCTGCTGCC
GGGTTCCCCCCCATCCCTCCCCCAGGTCAAGCTCCAGCAGGATACAGCCC
CAGTCCTACGCCCGGTATAGCTGGACCGCCGGGACAGGATGGTGGTTACG
CACCACCGCCCGGTATGGGCGCCGGTTTGCCTGGTCCGCCTCCGGGATTG
GGTGACAAGCGGTGAGCCGACCAGGTCAACTCCCTCCACCTCCCTTTGGA
ATGCCTCCTCTGGGCGCACCCGGCGCACCGGGCATGCCTCAAATCGGACA
AGAAAAGGCCCAATCGGTCATCGATTCCATCACCTCGTCCTACGCCGCCG
AAGGCCAGGCTGTCCCGAATCCCGCAATGGCTCCCCCGGGGGCTTACCCT
CCTCCATTTGGCTTCCCTGATGAGCGTGCGCAAGGCGCACAACGCCGGAC
GTAACCACCTCAGAAACGTGCTGGAATACTACCAACCCCCCGGAGCAAGA
GGTCTCCCCTTTCCACCCCCCTTCCCCGGTCCAGCAGGCGCCGCCCCTCC
TGCCGGTCTCCCCCCTCTCCCCAACATGCCCCCCGGTGCCCAGGGCTTCC
CTCCTCTGCCTGGCGGATTCCCTCCGAACTTCCCGACCCCTCCCCCTGGT
GCTGCTGCTGCCGGGTTCCCCCCCATCCCTCCCCCAGGTCAAGCTCCAGC
AGGATACAGCCCCAGTCCTACGCCCGGTATAGCTGGACCGCCGGGACAGG
ATGGTGGTTACGCACCACCGCCCGGTATGGGCGCCGGTTTGCCTGGTCCG
CCTCCGGGATTGGGTGACAAGCGGTGAGCCGACCAGGTCAACTCCCTCCA
CCTCCCTTTGGAATGCCTCCTCTGGGCGCACCCGGCGCACCGGGCATGCC
TCAAATCGGACAAGAAAAGGCCCAATCGGTCATCGATTCCATCACCTCGT
CCTACGCCGCCGAAGGCCAGGCTGTCCCGAATCCCGCAATGGCTCCCCCG
GGGGCTTACCCTCCTCCATTTGGCTTCCCTGATGAGCGTGCGCAAGGCGC
ACAACGCCGGACGTAACCACCTCAGAAACGTGCTGGAATACTACCAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000387spliceosomal snRNP assembly
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_96083M747DRAFT_96083Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_96083-T1M747DRAFT_96083-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_96083-T1.cdsM747DRAFT_96083-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_96083-T1.utr3p1M747DRAFT_96083-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_96083-T1.exon5M747DRAFT_96083-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_96083-T1.exon4M747DRAFT_96083-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_96083-T1.exon3M747DRAFT_96083-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_96083-T1.exon2M747DRAFT_96083-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_96083-T1.exon1M747DRAFT_96083-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_96083-T1.utr5p2M747DRAFT_96083-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_96083-T1.utr5p1M747DRAFT_96083-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR017340
DBxrefInterPro:IPR013085
DBxrefPFAM:PF06220
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:380408..381946 -
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