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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:100703..101903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000041-T1 ID=CBS51388_000041-T1|Name=CBS51388_000041-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1201bp|location=Sequence derived from alignment at An01:100703..101903+ (Aspergillus niger CBS 513.88)
ATGGAAGTAGCAGTCACGCATCTTCGGACTCTGGTGGGGCTCGCAACGCG
TACAGATCCATCGCCCCTACCCCCCGTCCAGGATATAATATCCCATATCC
AGTCGTTATATGACTCTGGCAGGCCCTTCTACACCAAGGATTTACTCCAG
TGTATCAAAGAGCAACTCCGGGGTGCTCGTGATGGGATCATTCAAACTAT
CCGTGTGCCCGGAGTGGATGAGGTTATTGTTGAGTTTCCGGTAATGACAG
GGCAGGTTTTCCCGACACCAGAGCAAGGAATGGAGTTAATCGTGTAAGTG
TTTGTGTTTGGATTTCTTTCTTCTGTCTGATTCATATTTACCCGGTGTTG
CAACGTAGTAAGAGTGCTTTAATCACTAACCCTAAATTGTGAAGCCGAAA
CCCCTGCATTGAATATTTATCTGTGCAGGAACTGCTTCAAGATTGCGATC
TGAGGGATGATAATCTGGCCTACAATCACATCCAGATCGGTCATTATCGC
TTTCTGCGGAATATTCACACCAAGGAGCTTTACTCAGACCTTTCAGTGGC
TTCGGTACCTGATGCAAGCGAGCTTCTTCGAAGAAGTTCGCGTATCTGGG
AGAACACCGCACAGTGTCAAGCTCTTCGGGCAATACTTATGTCACGAAAG
GATATCTCTATATCCAGGATTGTGGGGCTTGCGCTCGGGTCTTTCGCAAC
CGTTTACCCTAGTCTGCAAGATCGATCAGCTTTCCAGCATGCCCTTCTAT
TGACTCTGCGTGATATATCTTGCAATATGCAAAATATAGCACAGCAATCT
ATTCCGTGTTTTGCCCAAGACCCGATGTGCAACATAGTTGATATCACCGC
CGCTGAAGAGGCTGGAATCACGATTCTGGAAGACACTGACGGATTTCTTG
AAATTGATGATTCCACGGTGGTATTCTCATGCGCCCCAGACATTCCCGTA
AGGCAGATTGTTCTGGATCTAGCTCGACCTGCCGTCCTCATATGGGACAA
ATTGAGGAATGAAGATGATGATGATCACTCGTGAGTTACCACCCTTCTCA
AGTTTCAGCATGCGCAGACTTATCGTTGTACAGGGCCGACCCTGCCTCTC
CACGTGTGATGACTTGCCTACGGAACATCTATGAAGAATTCGAATTTCCT
GATTATGATAAGCACTTTGGCGACCTGGCAGTATACATTCGTCGGAATTA
G back to topCoding sequence (CDS) from alignment at An01:100703..101903+ >CBS51388_000041-T1 ID=CBS51388_000041-T1|Name=CBS51388_000041-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3141bp|location=Sequence derived from alignment at An01:100703..101903+ (Aspergillus niger CBS 513.88)
ATGGAAGTAGCAGTCACGCATCTTCGGACTCTGGTGGGGCTCGCAACGCG
TACAGATCCATCGCCCCTACCCCCCGTCCAGGATATAATATCCCATATCC
AGTCGTTATATGACTCTGGCAGGCCCTTCTACACCAAGGATTTACTCCAG
TGTATCAAAGAGCAACTCCGGGGTGCTCGTGATGGGATCATTCAAACTAT
CCGTGTGCCCGGAGTGGATGAGGTTATTGTTGAGTTTCCGGTAATGACAG
GGCAGGTTTTCCCGACACCAGAGCAAGGAATGGAGTTAATCGTCCGAAAC
CCCTGCATTGAATATTTATCTGTGCAGGAACTGCTTCAAGATTGCGATCT
GAGGGATGATAATCTGGCCTACAATCACATCCAGATCGGTCATTATCGCT
TTCTGCGGAATATTCACACCAAGGAGCTTTACTCAGACCTTTCAGTGGCT
TCGGTACCTGATGCAAGCGAGCTTCTTCGAAGAAGTTCGCGTATCTGGGA
GAACACCGCACAGTGTCAAGCTCTTCGGGCAATACTTATGTCACGAAAGG
ATATCTCTATATCCAGGATTGTGGGGCTTGCGCTCGGGTCTTTCGCAACC
GTTTACCCTAGTCTGCAAGATCGATCAGCTTTCCAGCATGCCCTTCTATT
GACTCTGCGTGATATATCTTGCAATATGCAAAATATAGCACAGCAATCTA
TTCCGTGTTTTGCCCAAGACCCGATGTGCAACATAGTTGATATCACCGCC
GCTGAAGAGGCTGGAATCACGATTCTGGAAGACACTGACGGATTTCTTGA
AATTGATGATTCCACGGTGGTATTCTCATGCGCCCCAGACATTCCCGTAA
GGCAGATTGTTCTGGATCTAGCTCGACCTGCCGTCCTCATATGGGACAAA
TTGAGGAATGAAGATGATGATGATCACTCGGCCGACCCTGCCTCTCCACG
TGTGATGACTTGCCTACGGAACATCTATGAAGAATTCGAATTTCCTGATT
ATGATAAGCACTTTGGCGACCTGGCAGTATACATTCGTCGGAATTAGATG
GAAGTAGCAGTCACGCATCTTCGGACTCTGGTGGGGCTCGCAACGCGTAC
AGATCCATCGCCCCTACCCCCCGTCCAGGATATAATATCCCATATCCAGT
CGTTATATGACTCTGGCAGGCCCTTCTACACCAAGGATTTACTCCAGTGT
ATCAAAGAGCAACTCCGGGGTGCTCGTGATGGGATCATTCAAACTATCCG
TGTGCCCGGAGTGGATGAGGTTATTGTTGAGTTTCCGGTAATGACAGGGC
AGGTTTTCCCGACACCAGAGCAAGGAATGGAGTTAATCGTCCGAAACCCC
TGCATTGAATATTTATCTGTGCAGGAACTGCTTCAAGATTGCGATCTGAG
GGATGATAATCTGGCCTACAATCACATCCAGATCGGTCATTATCGCTTTC
TGCGGAATATTCACACCAAGGAGCTTTACTCAGACCTTTCAGTGGCTTCG
GTACCTGATGCAAGCGAGCTTCTTCGAAGAAGTTCGCGTATCTGGGAGAA
CACCGCACAGTGTCAAGCTCTTCGGGCAATACTTATGTCACGAAAGGATA
TCTCTATATCCAGGATTGTGGGGCTTGCGCTCGGGTCTTTCGCAACCGTT
TACCCTAGTCTGCAAGATCGATCAGCTTTCCAGCATGCCCTTCTATTGAC
TCTGCGTGATATATCTTGCAATATGCAAAATATAGCACAGCAATCTATTC
CGTGTTTTGCCCAAGACCCGATGTGCAACATAGTTGATATCACCGCCGCT
GAAGAGGCTGGAATCACGATTCTGGAAGACACTGACGGATTTCTTGAAAT
TGATGATTCCACGGTGGTATTCTCATGCGCCCCAGACATTCCCGTAAGGC
AGATTGTTCTGGATCTAGCTCGACCTGCCGTCCTCATATGGGACAAATTG
AGGAATGAAGATGATGATGATCACTCGGCCGACCCTGCCTCTCCACGTGT
GATGACTTGCCTACGGAACATCTATGAAGAATTCGAATTTCCTGATTATG
ATAAGCACTTTGGCGACCTGGCAGTATACATTCGTCGGAATTAGATGGAA
GTAGCAGTCACGCATCTTCGGACTCTGGTGGGGCTCGCAACGCGTACAGA
TCCATCGCCCCTACCCCCCGTCCAGGATATAATATCCCATATCCAGTCGT
TATATGACTCTGGCAGGCCCTTCTACACCAAGGATTTACTCCAGTGTATC
AAAGAGCAACTCCGGGGTGCTCGTGATGGGATCATTCAAACTATCCGTGT
GCCCGGAGTGGATGAGGTTATTGTTGAGTTTCCGGTAATGACAGGGCAGG
TTTTCCCGACACCAGAGCAAGGAATGGAGTTAATCGTCCGAAACCCCTGC
ATTGAATATTTATCTGTGCAGGAACTGCTTCAAGATTGCGATCTGAGGGA
TGATAATCTGGCCTACAATCACATCCAGATCGGTCATTATCGCTTTCTGC
GGAATATTCACACCAAGGAGCTTTACTCAGACCTTTCAGTGGCTTCGGTA
CCTGATGCAAGCGAGCTTCTTCGAAGAAGTTCGCGTATCTGGGAGAACAC
CGCACAGTGTCAAGCTCTTCGGGCAATACTTATGTCACGAAAGGATATCT
CTATATCCAGGATTGTGGGGCTTGCGCTCGGGTCTTTCGCAACCGTTTAC
CCTAGTCTGCAAGATCGATCAGCTTTCCAGCATGCCCTTCTATTGACTCT
GCGTGATATATCTTGCAATATGCAAAATATAGCACAGCAATCTATTCCGT
GTTTTGCCCAAGACCCGATGTGCAACATAGTTGATATCACCGCCGCTGAA
GAGGCTGGAATCACGATTCTGGAAGACACTGACGGATTTCTTGAAATTGA
TGATTCCACGGTGGTATTCTCATGCGCCCCAGACATTCCCGTAAGGCAGA
TTGTTCTGGATCTAGCTCGACCTGCCGTCCTCATATGGGACAAATTGAGG
AATGAAGATGATGATGATCACTCGGCCGACCCTGCCTCTCCACGTGTGAT
GACTTGCCTACGGAACATCTATGAAGAATTCGAATTTCCTGATTATGATA
AGCACTTTGGCGACCTGGCAGTATACATTCGTCGGAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012942 |
| DBxref | PFAM:PF07985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:100703..101903 + |
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