You are here

Home

CBS51388_000044-T1, CBS51388_000044-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000044-T1
Unique NameCBS51388_000044-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:108997..110564-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000044-T1 ID=CBS51388_000044-T1|Name=CBS51388_000044-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1568bp|location=Sequence derived from alignment at An01:108997..110564- (Aspergillus niger CBS 513.88)
ATGGCTCCTCAACTCGCCTGGCTGGGCCTCGGTAACATGGGCCGCGTACG
CTCTCCCCGTCCCCAATAACTTATTAACAGTCCACAACCTCTAACCTCAA
AAACAGGGCATGGCCAAAAACCTCGCTGCCAAAGGCTCCCTCGCCACCCC
CCTAATCATCTACAACCGCAACATCACCCGCGCCCAAGAATTCCAAGCCG
CGACTCCCAACACCACCATTGCCAACACCGTCTCCGAAGCCGTCACCAAG
TCCGATATCATCTTCACCTGTGTCGGCGACGACGCCGCCATCCAATCCAT
CATCGACGCCAGCATCGCCAGCGGCTCCCCTCTCACCGACAAGCTCTTCG
TCGACTGCTCCACCGTCCACCCTGACACCACAACCTCCATCTCCGAGAAG
CTTCAGGCCAAGGGTGCTCGCTTCGTCGCCAGTCCCGTCTTCGGTGCCCC
TCCCATGGCCGCCGCCGGCCAAGTTATCCCCGTCCTGGCGGGTCCCCGCG
AAGCCGTCGAGCAGGTCAAGCCCTACACGACTGGGGTTATTGCCAAGGCG
GTTGTGGATTTCAGTGATCAGCCTCCGGCTAAGGCGTCGCAGTTGAAGAT
TCTTGGTAACACCTTTGTGTTGGGTATGGTCGAGAGTATTGCGGAGGGAT
TGGTGGTTGCGGATAAGTGTGGACTGGGCACGGATGCTCTGCATCAGTTC
TTTGAGGCTGTGTTCCCCGGCCCCTATGTGGCTTACTCGGCTAGGATGAG
GTCCGGTGATTATCATGAGCGGAAGGAGCCGTTGTTTGCGGTTGACCTGG
CTCGGAAGGATGCTCGTCATGCGATGGATTTGGCGGGTAAGGTGGGCGCT
AGGATGAAGGGAATTGAGTTGGCCGATGACTACATGGCGAAGGTTAAGGA
GCATATGGGTGAGAGGGGAGATGTTGCGGGTATGTATGGCGCTGTGCGCC
AGGAGGCGGGATTGAAGTTCGAGAATGCTCAGTAGCTTGATGTTGAGCCA
CCTCTTCTGTCTACGGGGCCTTACATCTTACCTACCAACCAACCAACCAA
CCATCATCTTGAGATCTAGATAGACCATATACGTATACTTGAATCCATTT
CTGCCCTGTTTCTTGAGCGTTAATGTGGTTCGACGAGCTAGCTGAATTGA
GCAGGTCGGTCACCTTTGTCTTCTCACCTTTCATCACCACATTGTAGCAT
TCCATCGATTTGACAAATCCAAGTCATTTAAAGTGCTCCCCGTATTTTGC
TACCCATAATCCACATATACCTACTATACTCTCTGACGAATGGCTCGCAG
AAAATCCAATGAAGATGCCAGTCTTATTAGAAGATTCATACGACGAAGAA
TTCTCTCCCTTCTGAGGACTGAGAAAGTTCATTTATGCCCATTGCATGTG
TCAAAACAAGAAAAAGGAAAATATTAATGTGGATGATCAGAACCTAGCAA
CGAGGCATTCTCAGTAAATTATGAGATCAATATTACCAGGCAAGAAATTG
CCAAGAAGAGGGCGAGACTCAGTGAACTACAAGCCGAACTGAGAAATAGA
CCATCTGTCAGTGCATAA
back to top

Coding sequence (CDS) from alignment at An01:108997..110564-

>CBS51388_000044-T1 ID=CBS51388_000044-T1|Name=CBS51388_000044-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2988bp|location=Sequence derived from alignment at An01:108997..110564- (Aspergillus niger CBS 513.88)
AACCTAGCAACGAGGCATTCTCAGTAAATTATGAGATCAATATTACCAGG
CAAGAAATTGCCAAGAAGAGGGCGAGACTCAGTGAACTACAAGCCGAACT
GAGAAATAGACCATCTGTCAGTGCATAAGGCATGGCCAAAAACCTCGCTG
CCAAAGGCTCCCTCGCCACCCCCCTAATCATCTACAACCGCAACATCACC
CGCGCCCAAGAATTCCAAGCCGCGACTCCCAACACCACCATTGCCAACAC
CGTCTCCGAAGCCGTCACCAAGTCCGATATCATCTTCACCTGTGTCGGCG
ACGACGCCGCCATCCAATCCATCATCGACGCCAGCATCGCCAGCGGCTCC
CCTCTCACCGACAAGCTCTTCGTCGACTGCTCCACCGTCCACCCTGACAC
CACAACCTCCATCTCCGAGAAGCTTCAGGCCAAGGGTGCTCGCTTCGTCG
CCAGTCCCGTCTTCGGTGCCCCTCCCATGGCCGCCGCCGGCCAAGTTATC
CCCGTCCTGGCGGGTCCCCGCGAAGCCGTCGAGCAGGTCAAGCCCTACAC
GACTGGGGTTATTGCCAAGGCGGTTGTGGATTTCAGTGATCAGCCTCCGG
CTAAGGCGTCGCAGTTGAAGATTCTTGGTAACACCTTTGTGTTGGGTATG
GTCGAGAGTATTGCGGAGGGATTGGTGGTTGCGGATAAGTGTGGACTGGG
CACGGATGCTCTGCATCAGTTCTTTGAGGCTGTGTTCCCCGGCCCCTATG
TGGCTTACTCGGCTAGGATGAGGTCCGGTGATTATCATGAGCGGAAGGAG
CCGTTGTTTGCGGTTGACCTGGCTCGGAAGGATGCTCGTCATGCGATGGA
TTTGGCGGGTAAGGTGGGCGCTAGGATGAAGGGAATTGAGTTGGCCGATG
ACTACATGGCGAAGGTTAAGGAGCATATGGGTGAGAGGGGAGATGTTGCG
GATGGCTCCTCAACTCGCCTGGCTGGGCCTCGGTAACATGGGCCGCAACC
TAGCAACGAGGCATTCTCAGTAAATTATGAGATCAATATTACCAGGCAAG
AAATTGCCAAGAAGAGGGCGAGACTCAGTGAACTACAAGCCGAACTGAGA
AATAGACCATCTGTCAGTGCATAAGGCATGGCCAAAAACCTCGCTGCCAA
AGGCTCCCTCGCCACCCCCCTAATCATCTACAACCGCAACATCACCCGCG
CCCAAGAATTCCAAGCCGCGACTCCCAACACCACCATTGCCAACACCGTC
TCCGAAGCCGTCACCAAGTCCGATATCATCTTCACCTGTGTCGGCGACGA
CGCCGCCATCCAATCCATCATCGACGCCAGCATCGCCAGCGGCTCCCCTC
TCACCGACAAGCTCTTCGTCGACTGCTCCACCGTCCACCCTGACACCACA
ACCTCCATCTCCGAGAAGCTTCAGGCCAAGGGTGCTCGCTTCGTCGCCAG
TCCCGTCTTCGGTGCCCCTCCCATGGCCGCCGCCGGCCAAGTTATCCCCG
TCCTGGCGGGTCCCCGCGAAGCCGTCGAGCAGGTCAAGCCCTACACGACT
GGGGTTATTGCCAAGGCGGTTGTGGATTTCAGTGATCAGCCTCCGGCTAA
GGCGTCGCAGTTGAAGATTCTTGGTAACACCTTTGTGTTGGGTATGGTCG
AGAGTATTGCGGAGGGATTGGTGGTTGCGGATAAGTGTGGACTGGGCACG
GATGCTCTGCATCAGTTCTTTGAGGCTGTGTTCCCCGGCCCCTATGTGGC
TTACTCGGCTAGGATGAGGTCCGGTGATTATCATGAGCGGAAGGAGCCGT
TGTTTGCGGTTGACCTGGCTCGGAAGGATGCTCGTCATGCGATGGATTTG
GCGGGTAAGGTGGGCGCTAGGATGAAGGGAATTGAGTTGGCCGATGACTA
CATGGCGAAGGTTAAGGAGCATATGGGTGAGAGGGGAGATGTTGCGGATG
GCTCCTCAACTCGCCTGGCTGGGCCTCGGTAACATGGGCCGCAACCTAGC
AACGAGGCATTCTCAGTAAATTATGAGATCAATATTACCAGGCAAGAAAT
TGCCAAGAAGAGGGCGAGACTCAGTGAACTACAAGCCGAACTGAGAAATA
GACCATCTGTCAGTGCATAAGGCATGGCCAAAAACCTCGCTGCCAAAGGC
TCCCTCGCCACCCCCCTAATCATCTACAACCGCAACATCACCCGCGCCCA
AGAATTCCAAGCCGCGACTCCCAACACCACCATTGCCAACACCGTCTCCG
AAGCCGTCACCAAGTCCGATATCATCTTCACCTGTGTCGGCGACGACGCC
GCCATCCAATCCATCATCGACGCCAGCATCGCCAGCGGCTCCCCTCTCAC
CGACAAGCTCTTCGTCGACTGCTCCACCGTCCACCCTGACACCACAACCT
CCATCTCCGAGAAGCTTCAGGCCAAGGGTGCTCGCTTCGTCGCCAGTCCC
GTCTTCGGTGCCCCTCCCATGGCCGCCGCCGGCCAAGTTATCCCCGTCCT
GGCGGGTCCCCGCGAAGCCGTCGAGCAGGTCAAGCCCTACACGACTGGGG
TTATTGCCAAGGCGGTTGTGGATTTCAGTGATCAGCCTCCGGCTAAGGCG
TCGCAGTTGAAGATTCTTGGTAACACCTTTGTGTTGGGTATGGTCGAGAG
TATTGCGGAGGGATTGGTGGTTGCGGATAAGTGTGGACTGGGCACGGATG
CTCTGCATCAGTTCTTTGAGGCTGTGTTCCCCGGCCCCTATGTGGCTTAC
TCGGCTAGGATGAGGTCCGGTGATTATCATGAGCGGAAGGAGCCGTTGTT
TGCGGTTGACCTGGCTCGGAAGGATGCTCGTCATGCGATGGATTTGGCGG
GTAAGGTGGGCGCTAGGATGAAGGGAATTGAGTTGGCCGATGACTACATG
GCGAAGGTTAAGGAGCATATGGGTGAGAGGGGAGATGTTGCGGATGGCTC
CTCAACTCGCCTGGCTGGGCCTCGGTAACATGGGCCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0051287NAD binding
GO:0050661NADP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000044CBS51388_000044Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000044-T1CBS51388_000044-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000044-T1.cdsCBS51388_000044-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000044-T1.exon3CBS51388_000044-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000044-T1.exon2CBS51388_000044-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000044-T1.exon1CBS51388_000044-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR015815
DBxrefInterPro:IPR029154
DBxrefInterPro:IPR006115
DBxrefPFAM:PF01488
DBxrefPFAM:PF03446
DBxrefPFAM:PF14833
DBxrefPFAM:PF03807
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:108997..110564 -
Powered by Drupal