You are here

Home

CBS51388_000062-T1, CBS51388_000062-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000062-T1
Unique NameCBS51388_000062-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:153643..154856+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000062-T1 ID=CBS51388_000062-T1|Name=CBS51388_000062-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1214bp|location=Sequence derived from alignment at An01:153643..154856+ (Aspergillus niger CBS 513.88)
ATGGCTGCGACCGCCACAGCACTGGTGATGAGAGAGGTGAATAGTCCACT
CAGCCTGGAGGACATTCGTCTTAATGACCTGAGAGCCGACGAAGTGCTAG
TCGAAATTCATGCGACAGGCATCTGTCATACAGATCTGTCTTGTATGAAT
GGAAATTTACCTGCATCTACTCCATGTGTATTCGGACACGAAGGTATGAA
AATCCCGCTTGGATGCCCATAACCAGCTAAGACTTCACCTAGGGGCTGGG
GTCGTTGTGAAAACCGGCAGCAGCATCACACATCTCCATGTAGACGACAA
GGTGTTATTGAGTTATGCATTCTGCGGAAATTGCGAGCAATGCACCAGCG
AACATCCAGCATATTGCAACCAGTGGGTGCCGAGCAACTTCGGTCAACAA
AGGTCAGATGGGAGCTTTACCCTGTCTTTCCCGAACGGAGATCCTCTGCG
TGGAAATTTCTTCGGTCAGAGTTCTTTCGCCAGTTTGGCCATTGTGCATG
CATCATGTGTTGTGAAAGTGGGTCCTGAATGTCCTTTGGATAGATTCGCA
CCGCTAGGTTGTGGATTCCAGACTGGAGCAGGGGCAGTGATAAACACACT
TGACGTGCAACCAGGATCAAGCCTAGCGGTATTCGGTGCTGGTTCCGTGG
GTATGAGTGCTATCATGGCGGGGAAGATACGTGGCGCAAAGACTATTATC
GCCGTGGACTTAAATCAGGATCGGCTAGACCTTGCGAAGAAGCTTGGAGC
GACACATACCATTATCGGATCTGATGAGGACATTGTCAAGCAGATCCAAG
CGATTTGTCCACCGCTTGGAGTGCAGTATGCCGTTGACTGTACCGGTGTT
CCGGCAGTTGTTGAGAAAGCTATTCAGGCGCTTGGGACGCGAGGAAAATT
GGCCACTGTTGGTGCTCCAACACCCGGAAAAACAGCTAAAGTCGATATAT
TCGCACAACTGGTGTTCGGTCGCCAGTATGTAGGTTGCTGTGAGGGAGAC
GGTCAACCCGAAAAGGTAAATATGCTCCCGCACAATCAGATAAAGCAGCA
TCGCTAAGAACGTCTAGTTCCTGCCATACCTCATTGAGCAAAATACCAAA
GGGAACTATCCCATCGAGGAACTCATCAAGAACTATCCGATTGAGAAATA
TGATGAAGCAATCAGCGATATGAAGACCGGCAAGACTTTGAAGGCAGTGC
TACTGTGGAAGTAG
back to top

Coding sequence (CDS) from alignment at An01:153643..154856+

>CBS51388_000062-T1 ID=CBS51388_000062-T1|Name=CBS51388_000062-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3339bp|location=Sequence derived from alignment at An01:153643..154856+ (Aspergillus niger CBS 513.88)
ATGGCTGCGACCGCCACAGCACTGGTGATGAGAGAGGTGAATAGTCCACT
CAGCCTGGAGGACATTCGTCTTAATGACCTGAGAGCCGACGAAGTGCTAG
TCGAAATTCATGCGACAGGCATCTGTCATACAGATCTGTCTTGTATGAAT
GGAAATTTACCTGCATCTACTCCATGTGTATTCGGACACGAAGGGGCTGG
GGTCGTTGTGAAAACCGGCAGCAGCATCACACATCTCCATGTAGACGACA
AGGTGTTATTGAGTTATGCATTCTGCGGAAATTGCGAGCAATGCACCAGC
GAACATCCAGCATATTGCAACCAGTGGGTGCCGAGCAACTTCGGTCAACA
AAGGTCAGATGGGAGCTTTACCCTGTCTTTCCCGAACGGAGATCCTCTGC
GTGGAAATTTCTTCGGTCAGAGTTCTTTCGCCAGTTTGGCCATTGTGCAT
GCATCATGTGTTGTGAAAGTGGGTCCTGAATGTCCTTTGGATAGATTCGC
ACCGCTAGGTTGTGGATTCCAGACTGGAGCAGGGGCAGTGATAAACACAC
TTGACGTGCAACCAGGATCAAGCCTAGCGGTATTCGGTGCTGGTTCCGTG
GGTATGAGTGCTATCATGGCGGGGAAGATACGTGGCGCAAAGACTATTAT
CGCCGTGGACTTAAATCAGGATCGGCTAGACCTTGCGAAGAAGCTTGGAG
CGACACATACCATTATCGGATCTGATGAGGACATTGTCAAGCAGATCCAA
GCGATTTGTCCACCGCTTGGAGTGCAGTATGCCGTTGACTGTACCGGTGT
TCCGGCAGTTGTTGAGAAAGCTATTCAGGCGCTTGGGACGCGAGGAAAAT
TGGCCACTGTTGGTGCTCCAACACCCGGAAAAACAGCTAAAGTCGATATA
TTCGCACAACTGGTGTTCGGTCGCCAGTATGTAGGTTGCTGTGAGGGAGA
CGGTCAACCCGAAAAGTTCCTGCCATACCTCATTGAGCAAAATACCAAAG
GGAACTATCCCATCGAGGAACTCATCAAGAACTATCCGATTGAGAAATAT
GATGAAGCAATCAGCGATATGAAGACCGGCAAGACTTTGAAGGCAGTGCT
ACTGTGGAAGTAGATGGCTGCGACCGCCACAGCACTGGTGATGAGAGAGG
TGAATAGTCCACTCAGCCTGGAGGACATTCGTCTTAATGACCTGAGAGCC
GACGAAGTGCTAGTCGAAATTCATGCGACAGGCATCTGTCATACAGATCT
GTCTTGTATGAATGGAAATTTACCTGCATCTACTCCATGTGTATTCGGAC
ACGAAGGGGCTGGGGTCGTTGTGAAAACCGGCAGCAGCATCACACATCTC
CATGTAGACGACAAGGTGTTATTGAGTTATGCATTCTGCGGAAATTGCGA
GCAATGCACCAGCGAACATCCAGCATATTGCAACCAGTGGGTGCCGAGCA
ACTTCGGTCAACAAAGGTCAGATGGGAGCTTTACCCTGTCTTTCCCGAAC
GGAGATCCTCTGCGTGGAAATTTCTTCGGTCAGAGTTCTTTCGCCAGTTT
GGCCATTGTGCATGCATCATGTGTTGTGAAAGTGGGTCCTGAATGTCCTT
TGGATAGATTCGCACCGCTAGGTTGTGGATTCCAGACTGGAGCAGGGGCA
GTGATAAACACACTTGACGTGCAACCAGGATCAAGCCTAGCGGTATTCGG
TGCTGGTTCCGTGGGTATGAGTGCTATCATGGCGGGGAAGATACGTGGCG
CAAAGACTATTATCGCCGTGGACTTAAATCAGGATCGGCTAGACCTTGCG
AAGAAGCTTGGAGCGACACATACCATTATCGGATCTGATGAGGACATTGT
CAAGCAGATCCAAGCGATTTGTCCACCGCTTGGAGTGCAGTATGCCGTTG
ACTGTACCGGTGTTCCGGCAGTTGTTGAGAAAGCTATTCAGGCGCTTGGG
ACGCGAGGAAAATTGGCCACTGTTGGTGCTCCAACACCCGGAAAAACAGC
TAAAGTCGATATATTCGCACAACTGGTGTTCGGTCGCCAGTATGTAGGTT
GCTGTGAGGGAGACGGTCAACCCGAAAAGTTCCTGCCATACCTCATTGAG
CAAAATACCAAAGGGAACTATCCCATCGAGGAACTCATCAAGAACTATCC
GATTGAGAAATATGATGAAGCAATCAGCGATATGAAGACCGGCAAGACTT
TGAAGGCAGTGCTACTGTGGAAGTAGATGGCTGCGACCGCCACAGCACTG
GTGATGAGAGAGGTGAATAGTCCACTCAGCCTGGAGGACATTCGTCTTAA
TGACCTGAGAGCCGACGAAGTGCTAGTCGAAATTCATGCGACAGGCATCT
GTCATACAGATCTGTCTTGTATGAATGGAAATTTACCTGCATCTACTCCA
TGTGTATTCGGACACGAAGGGGCTGGGGTCGTTGTGAAAACCGGCAGCAG
CATCACACATCTCCATGTAGACGACAAGGTGTTATTGAGTTATGCATTCT
GCGGAAATTGCGAGCAATGCACCAGCGAACATCCAGCATATTGCAACCAG
TGGGTGCCGAGCAACTTCGGTCAACAAAGGTCAGATGGGAGCTTTACCCT
GTCTTTCCCGAACGGAGATCCTCTGCGTGGAAATTTCTTCGGTCAGAGTT
CTTTCGCCAGTTTGGCCATTGTGCATGCATCATGTGTTGTGAAAGTGGGT
CCTGAATGTCCTTTGGATAGATTCGCACCGCTAGGTTGTGGATTCCAGAC
TGGAGCAGGGGCAGTGATAAACACACTTGACGTGCAACCAGGATCAAGCC
TAGCGGTATTCGGTGCTGGTTCCGTGGGTATGAGTGCTATCATGGCGGGG
AAGATACGTGGCGCAAAGACTATTATCGCCGTGGACTTAAATCAGGATCG
GCTAGACCTTGCGAAGAAGCTTGGAGCGACACATACCATTATCGGATCTG
ATGAGGACATTGTCAAGCAGATCCAAGCGATTTGTCCACCGCTTGGAGTG
CAGTATGCCGTTGACTGTACCGGTGTTCCGGCAGTTGTTGAGAAAGCTAT
TCAGGCGCTTGGGACGCGAGGAAAATTGGCCACTGTTGGTGCTCCAACAC
CCGGAAAAACAGCTAAAGTCGATATATTCGCACAACTGGTGTTCGGTCGC
CAGTATGTAGGTTGCTGTGAGGGAGACGGTCAACCCGAAAAGTTCCTGCC
ATACCTCATTGAGCAAAATACCAAAGGGAACTATCCCATCGAGGAACTCA
TCAAGAACTATCCGATTGAGAAATATGATGAAGCAATCAGCGATATGAAG
ACCGGCAAGACTTTGAAGGCAGTGCTACTGTGGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000062CBS51388_000062Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000062-T1.exon1CBS51388_000062-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000062-T1.exon2CBS51388_000062-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000062-T1.exon3CBS51388_000062-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000062-T1.cdsCBS51388_000062-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000062-T1CBS51388_000062-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF16912
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:153643..154856 +
Powered by Drupal