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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:489382..491550- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000189-T1 ID=CBS51388_000189-T1|Name=CBS51388_000189-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2169bp|location=Sequence derived from alignment at An01:489382..491550- (Aspergillus niger CBS 513.88)
ATGAAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCC
GCGGCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAAT
GCGATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGC
CGTTATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACT
ATTAGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGC
CTCCAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGG
GCGTGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCA
CATGGCTGACCGGGTACCAACAGCAACCCCAAAATGGCTGCGAGATGGAT
TGGATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAG
ACGGGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGC
TATCGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGA
AATCGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTAT
CTCTACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGAT
TTATCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGC
TGCTTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTG
GCATCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGG
CGCTGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCT
TGCAGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCA
CCATCCGTGAGCGGTCTCTTCGTACATGGTGCGATAGTCAGCCAAGCGAA
GAGTCTCATGCTGCACTGCATCGACTCCCCGCGCTTTCGGAATGAGAGAG
AGGGAAGNATTACGATGCAATAGATCTTGAAGTCAAGAGACGACTATGGT
GGGATCTGACGTCTTTCGACTGGTAAGAGGTATTCGAGTGATGGATGGTC
ATGGCTGATTAACAATTGCAGGCTACTGGGCTTTCTTACTGGCCCTCAAG
AGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCCATTG
AATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAAACTC
CACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCTGCTG
TGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGGCTTA
GAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATCGAGC
CGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGACGAC
GGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGGCTGT
CTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAGATTT
CTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTGATCT
GCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGATGGA
AACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAATGCA
TCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTCAATT
GGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGCCTGC
CGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAGGAAT
CAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAGCAGG
CTGAAAATCACACTATTACTTCACAAGGGGCGGATGGAGCGCGATCTCAT
CCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAAACGT
CATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCATGAGA
GGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGACCTG
GCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAGACCC
GGAGCTATCTCGAGGATGA back to topCoding sequence (CDS) from alignment at An01:489382..491550- >CBS51388_000189-T1 ID=CBS51388_000189-T1|Name=CBS51388_000189-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6075bp|location=Sequence derived from alignment at An01:489382..491550- (Aspergillus niger CBS 513.88)
GCTACTGGGCTTTCTTACTGGCCCTCAAGAGTGGACGTACCTCATCCAGC
CGCACCACATGAACGTGAACCAGCCATTGAATATCGATGATAATGCAATG
TGCCACAACATGGTTTCAATGCCAAACTCCACACCAACAGACATGTCCTT
TTTCCTTCAACGCCTGACCCTAGCTGCTGTGAGCCGGGAGGTAGTTGATG
CAACATCCTACGAGCATCTCCATGGCTTAGAGCCAATTTACGAAAAAATA
CTCGAGCTAGACAAAAAGTTCCATCGAGCCGTGGCGGAGATTCCTGACTT
CTTCCGCCTGGATCCATCATCCAGACGACGGTTTGCTTCGCTCTACGAAG
AGCGTCCGACCATTGCCTGGCAAGGCTGTCTCCTACAACAAGGCTTCTTC
TCCCGCTTATGCCGTCTGCATCGAGATTTCTTCATCAGAGGAGCTCGTGA
ACCAGCATATTCCTATTCCCACGTGATCTGCCTGCAGTCTGCCCGGAAAG
TGCTCGAGATTAAAAGAATCATGGATGGAAACGAACCGAACTACACCCCA
CCGAACTCTGTCGTCTGGTCCGTAATGCATCATGTATTCGCTGCTGCTGT
GATATTATTACTGGACGTGTGCTTCAATTGGGATGATATTCTAGCCGAGA
AGCGAAAAGAAGAAGTGCTGGATGCCTGCCGCATGCTGAGCAAGGCACAA
GAGTCGTCTGCCCTGGTCAGGGAAGGAATCAACGCAATGATGGGTGTGTT
GCAAAAGCATTGGAGAACCGGAAAGCAGGCTGAAAATCACACTATTACTT
CACAAGGGGCGGATGGAGCGCGATCTCATCCTGGCTCTGCACCGGCTCAT
GTCCCAGCTCTCAATGCTGAATCAAACGTCATGCCGCCACACCTCCCAGC
TGCCACCAATGACAATGCACCTCATGAGAGGCAGCTGGAAGATATCTGGA
CCGAGATGCTTGAGACGGGTAACGACCTGGCTCTGGATTCTGCAGACTGG
ACGGAACTGTTGAATGAGCTGACAGACCCGGAGCTATCTCGAGGATGAAT
CTTGAAGTCAAGAGACGACTATGGTGGGATCTGACGTCTTTCGACTGATG
AAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCCGCG
GCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAATGCG
ATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGCCGT
TATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACTATT
AGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGCCTC
CAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGGGCG
TGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCACAT
GGCTGACCGGGTACCAACAGCAACCCCAAAATGGCTGCGAGATGGATTGG
ATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAGACG
GGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGCTAT
CGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGAAAT
CGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTATCTC
TACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGATTTA
TCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGCTGC
TTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTGGCA
TCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGGCGC
TGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCTTGC
AGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCACCA
TCCGTGAGCGGTCTCTTCGTACATGGCTACTGGGCTTTCTTACTGGCCCT
CAAGAGTGGACGTACCTCATCCAGCCGCACCACATGAACGTGAACCAGCC
ATTGAATATCGATGATAATGCAATGTGCCACAACATGGTTTCAATGCCAA
ACTCCACACCAACAGACATGTCCTTTTTCCTTCAACGCCTGACCCTAGCT
GCTGTGAGCCGGGAGGTAGTTGATGCAACATCCTACGAGCATCTCCATGG
CTTAGAGCCAATTTACGAAAAAATACTCGAGCTAGACAAAAAGTTCCATC
GAGCCGTGGCGGAGATTCCTGACTTCTTCCGCCTGGATCCATCATCCAGA
CGACGGTTTGCTTCGCTCTACGAAGAGCGTCCGACCATTGCCTGGCAAGG
CTGTCTCCTACAACAAGGCTTCTTCTCCCGCTTATGCCGTCTGCATCGAG
ATTTCTTCATCAGAGGAGCTCGTGAACCAGCATATTCCTATTCCCACGTG
ATCTGCCTGCAGTCTGCCCGGAAAGTGCTCGAGATTAAAAGAATCATGGA
TGGAAACGAACCGAACTACACCCCACCGAACTCTGTCGTCTGGTCCGTAA
TGCATCATGTATTCGCTGCTGCTGTGATATTATTACTGGACGTGTGCTTC
AATTGGGATGATATTCTAGCCGAGAAGCGAAAAGAAGAAGTGCTGGATGC
CTGCCGCATGCTGAGCAAGGCACAAGAGTCGTCTGCCCTGGTCAGGGAAG
GAATCAACGCAATGATGGGTGTGTTGCAAAAGCATTGGAGAACCGGAAAG
CAGGCTGAAAATCACACTATTACTTCACAAGGGGCGGATGGAGCGCGATC
TCATCCTGGCTCTGCACCGGCTCATGTCCCAGCTCTCAATGCTGAATCAA
ACGTCATGCCGCCACACCTCCCAGCTGCCACCAATGACAATGCACCTCAT
GAGAGGCAGCTGGAAGATATCTGGACCGAGATGCTTGAGACGGGTAACGA
CCTGGCTCTGGATTCTGCAGACTGGACGGAACTGTTGAATGAGCTGACAG
ACCCGGAGCTATCTCGAGGATGAATCTTGAAGTCAAGAGACGACTATGGT
GGGATCTGACGTCTTTCGACTGATGAAGCGCAAAGCTGCATTCCAGCTGC
CTCATACCCCCCGACGCGCTCCGCGGCAGGACCCCGTGTCTTGCGACTCT
TGTCGGCTCAAGAAGATTAAATGCGATCGCCAGCAGCCATGCAGCAGTTG
CTCTGCGCGCCGGTTGACATGCCGTTATGGAAAGCCAGAAGCTGCAGGTA
CCGCAAGGGTTCAAAAACCACTATTAGCAGCTGGTGTGGAGCGGACATCC
CCTCCCAGTAACCCAACTGTGCCTCCAAGAGCCGATAACGTGCCTATTGA
GCCCACTGCAGCTCCATTGCGGGCGTGCAATCGGGAGTCGCTGCTCACAG
CGGACTGGCTGGAGAACATTCACATGGCTGACCGGGTACCAACAGCAACC
CCAAAATGGCTGCGAGATGGATTGGATGATCCAGTAAGAGGGCGCAACTT
AAACTTAAGCCTAAACGATGAGACGGGTTCTGCAAGACCCCTACTGTCAA
TGCCATACATGAATCGATCCGCTATCGATGAGAATCCGGCGTCGATCAAT
TTGATCACCTTTGTACCCGCGAAATCGGAGGCTCTGGATCTCTTTCGATA
CTATCATCGTTACGTCGACTATCTCTACCATATCATCGTCCCAAAGCGTG
TCGAGGGCCAGATAAATGGGATTTATCGTTGTATTGAAAGCAATGCGCCC
GTGGATCTCAACCACTTGGCGCTGCTTTTCGGCATTCTAGCCAGCTCTCT
ATGTCTACAACGATCAGTGGTGGCATCTACTGATGCAGAAGCGCGCAGCC
AAGAGTTTGCCTTTCTCACTGGCGCTGCATTAATTCAAAGCCACTACTCT
CTGTCTCCAACTCTTGTGGGCTTGCAGGCAACCATGGTGGTCATGCATAA
TGTCTCTAACTGGAACATTCCACCATCCGTGAGCGGTCTCTTCGTACATG
GCTACTGGGCTTTCTTACTGGCCCTCAAGAGTGGACGTACCTCATCCAGC
CGCACCACATGAACGTGAACCAGCCATTGAATATCGATGATAATGCAATG
TGCCACAACATGGTTTCAATGCCAAACTCCACACCAACAGACATGTCCTT
TTTCCTTCAACGCCTGACCCTAGCTGCTGTGAGCCGGGAGGTAGTTGATG
CAACATCCTACGAGCATCTCCATGGCTTAGAGCCAATTTACGAAAAAATA
CTCGAGCTAGACAAAAAGTTCCATCGAGCCGTGGCGGAGATTCCTGACTT
CTTCCGCCTGGATCCATCATCCAGACGACGGTTTGCTTCGCTCTACGAAG
AGCGTCCGACCATTGCCTGGCAAGGCTGTCTCCTACAACAAGGCTTCTTC
TCCCGCTTATGCCGTCTGCATCGAGATTTCTTCATCAGAGGAGCTCGTGA
ACCAGCATATTCCTATTCCCACGTGATCTGCCTGCAGTCTGCCCGGAAAG
TGCTCGAGATTAAAAGAATCATGGATGGAAACGAACCGAACTACACCCCA
CCGAACTCTGTCGTCTGGTCCGTAATGCATCATGTATTCGCTGCTGCTGT
GATATTATTACTGGACGTGTGCTTCAATTGGGATGATATTCTAGCCGAGA
AGCGAAAAGAAGAAGTGCTGGATGCCTGCCGCATGCTGAGCAAGGCACAA
GAGTCGTCTGCCCTGGTCAGGGAAGGAATCAACGCAATGATGGGTGTGTT
GCAAAAGCATTGGAGAACCGGAAAGCAGGCTGAAAATCACACTATTACTT
CACAAGGGGCGGATGGAGCGCGATCTCATCCTGGCTCTGCACCGGCTCAT
GTCCCAGCTCTCAATGCTGAATCAAACGTCATGCCGCCACACCTCCCAGC
TGCCACCAATGACAATGCACCTCATGAGAGGCAGCTGGAAGATATCTGGA
CCGAGATGCTTGAGACGGGTAACGACCTGGCTCTGGATTCTGCAGACTGG
ACGGAACTGTTGAATGAGCTGACAGACCCGGAGCTATCTCGAGGATGAAT
CTTGAAGTCAAGAGACGACTATGGTGGGATCTGACGTCTTTCGACTGATG
AAGCGCAAAGCTGCATTCCAGCTGCCTCATACCCCCCGACGCGCTCCGCG
GCAGGACCCCGTGTCTTGCGACTCTTGTCGGCTCAAGAAGATTAAATGCG
ATCGCCAGCAGCCATGCAGCAGTTGCTCTGCGCGCCGGTTGACATGCCGT
TATGGAAAGCCAGAAGCTGCAGGTACCGCAAGGGTTCAAAAACCACTATT
AGCAGCTGGTGTGGAGCGGACATCCCCTCCCAGTAACCCAACTGTGCCTC
CAAGAGCCGATAACGTGCCTATTGAGCCCACTGCAGCTCCATTGCGGGCG
TGCAATCGGGAGTCGCTGCTCACAGCGGACTGGCTGGAGAACATTCACAT
GGCTGACCGGGTACCAACAGCAACCCCAAAATGGCTGCGAGATGGATTGG
ATGATCCAGTAAGAGGGCGCAACTTAAACTTAAGCCTAAACGATGAGACG
GGTTCTGCAAGACCCCTACTGTCAATGCCATACATGAATCGATCCGCTAT
CGATGAGAATCCGGCGTCGATCAATTTGATCACCTTTGTACCCGCGAAAT
CGGAGGCTCTGGATCTCTTTCGATACTATCATCGTTACGTCGACTATCTC
TACCATATCATCGTCCCAAAGCGTGTCGAGGGCCAGATAAATGGGATTTA
TCGTTGTATTGAAAGCAATGCGCCCGTGGATCTCAACCACTTGGCGCTGC
TTTTCGGCATTCTAGCCAGCTCTCTATGTCTACAACGATCAGTGGTGGCA
TCTACTGATGCAGAAGCGCGCAGCCAAGAGTTTGCCTTTCTCACTGGCGC
TGCATTAATTCAAAGCCACTACTCTCTGTCTCCAACTCTTGTGGGCTTGC
AGGCAACCATGGTGGTCATGCATAATGTCTCTAACTGGAACATTCCACCA
TCCGTGAGCGGTCTCTTCGTACATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:489382..491550 - |
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