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CBS51388_000249-T1, CBS51388_000249-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000249-T1
Unique NameCBS51388_000249-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:684340..685173-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000249-T1 ID=CBS51388_000249-T1|Name=CBS51388_000249-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=834bp|location=Sequence derived from alignment at An01:684340..685173- (Aspergillus niger CBS 513.88)
ATGGCTGACGAGGTAGGTGTTAACTCTCCTTCTGCGAACTTCCCGGTCTA
CTCAGTTGCGGCCTATCTTTGTCCTGCTTGCTCGGTTGGGTTGGGTGTCT
TCGGGGCCTCGCATCTCGATCGCTGCCCCCCACCCAACCCCCCTCGTTCC
TGCAGACATTGCATATTTTGCTACACTCGCCGACCATCTGCTATAATTTC
AATCATGGGCTAGTTCGCTAATGTTCACCTTTAACAGCACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTTATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCGTGAGTAGTTTGGAACATGAACGGTCTTGGTGATCTTGACTCGCTA
ACACAGCTATAGCTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGA
CGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGG
GCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCAGTGAG
TAACACCCGTCCGTTTTGGCTAGGTGGCTGTTGGCAAGATTACTGACGAA
TTTTCCTTTTCAGACGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTG
CATGGATGTCAAGGAGGCTCCCAAGGGCAACTAA
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Coding sequence (CDS) from alignment at An01:684340..685173-

>CBS51388_000249-T1 ID=CBS51388_000249-T1|Name=CBS51388_000249-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1932bp|location=Sequence derived from alignment at An01:684340..685173- (Aspergillus niger CBS 513.88)
ACGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTGCATGGATGTCAAG
GAGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTC
CCTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAG
GTGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGAC
TGCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCT
TCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTTATCAAG
GGCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCA
CGGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGA
AGCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTC
TACCGCAAGGAATACCAGCTCATGGCTGACGAGACGTCACCATCCTGTCC
TCCATGGGCGAGCAGGTCTGCATGGATGTCAAGGAGGCTCCCAAGGGCAA
CTAACTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGACGAGAACG
GTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGT
ATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCACACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTTATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCATGGCTGACGAGACGTCACCATCCTGTCCTCCATGGGCGAGCAGGT
CTGCATGGATGTCAAGGAGGCTCCCAAGGGCAACTAACTTGACGTTACTG
ACGACGACTTCCTTTCCCTGATGGACGAGAACGGTAACACCAAGGACGAC
GTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGTATCCGCCGCATGTTCCA
CGATGAGGAGAAGGACTGCACACCACGAGACCTTCGAGTCCGCCGACGCC
GGCGCCTCGGCCACCTTCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGG
TCACGTTGTTATCAAGGGCCGCCCCTGCAAGATCGTTGAGATGTCCACCT
CCAAGACTGGCAAGCACGGTCACGCCAAGGTCCACATCGTTGCCATCGAT
ATCTTCACTGGCAAGAAGCTTGAGGATCTGTCCCCCTCCACCCACAACAT
GGACGTCCCCAACGTCTACCGCAAGGAATACCAGCTCATGGCTGACGAGA
CGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTGCATGGATGTCAAGG
AGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTCC
CTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGG
TGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACT
GCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTT
CCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTTATCAAGG
GCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCAC
GGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGAA
GCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTCT
ACCGCAAGGAATACCAGCTCATGGCTGACGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045905positive regulation of translational termination
GO:0045901positive regulation of translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003723RNA binding
GO:0043022ribosome binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ANB1CBS51388_000249Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000249-T1CBS51388_000249-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000249-T1.cdsCBS51388_000249-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000249-T1.exon4CBS51388_000249-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000249-T1.exon3CBS51388_000249-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000249-T1.exon2CBS51388_000249-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000249-T1.exon1CBS51388_000249-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019769
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR001884
DBxrefInterPro:IPR020189
DBxrefPFAM:PF01287
Producttranslation initiation factor eIF5A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:684340..685173 -
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