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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:719564..721921- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000264-T1 ID=CBS51388_000264-T1|Name=CBS51388_000264-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2358bp|location=Sequence derived from alignment at An01:719564..721921- (Aspergillus niger CBS 513.88)
ATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAACGGCGC
CGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCACCACCC
CCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCAACCAG
CCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTGACCGA
GGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTCCATCC
GTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCTACGTT
AACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTCAACTA
CACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCGTGACC
CCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTGGAC
AGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTCGGCAA
CATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAAGGGAT
ACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCATCAAG
CACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGCCACCA
CATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGCCAACT
TCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACGATGAG
TTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACCCTCAG
CCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTTCTCTA
CCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGGAGATC
CGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAGCGTGA
GGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGCTTCCA
AGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACATTGAT
GATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACCTCTGC
CAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGACTCTG
CTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCACCCCT
GAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCCTCCGA
GGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGGTAAGA
GCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTTCCAAG
GCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTCTACGT
TGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGCTAGCA
TCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCGCTGGT
ATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGCCAGCA
GGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCAGCCCG
GTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCGGTCCC
TTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAGATTCC
CCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGGTGGCA
TCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCGGACGC
GGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAGGGTAT
GCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCAGCAGG
GTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTGCGCCC
GCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACTCTGGG
TGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCTCTACC
CCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTGGTATG
CTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGTGAGTTTTTTTCCC
TTCTGCTCCATTTGACTGTCAGTTCTTGTTGCTAATATATTATTGTAGGC
TTGAGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTT
TACGATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGC
TGAGGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACA
AGGCGTAA back to topCoding sequence (CDS) from alignment at An01:719564..721921- >CBS51388_000264-T1 ID=CBS51388_000264-T1|Name=CBS51388_000264-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4590bp|location=Sequence derived from alignment at An01:719564..721921- (Aspergillus niger CBS 513.88)
GCTTGAGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCG
TTTACGATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCC
GCTGAGGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAA
CAAGGCGTAAATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACG
TCAACGGCGCCGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGT
GCCACCACCCCCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGC
TGCCAACCAGCCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCT
CGGTGACCGAGGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTT
GCCTCCATCCGTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATA
CGCCTACGTTAACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAG
ACCTCAACTACACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCC
CAGCGTGACCCCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAA
GAACCTGGACAGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTG
CCTTCGGCAACATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAAC
TCCAAGGGATACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAA
CGCCATCAAGCACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCG
TCGGCCACCACATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATG
AAGGCCAACTTCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGA
TGACGATGAGTTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCG
CCACCCTCAGCCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTC
AACTTCTCTACCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGA
CAAGGAGATCCGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGC
ACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAG
AAGGCTTCCAAGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGA
TGACATTGATGATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCA
TCACCTCTGCCAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCT
CCCGACTCTGCTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGA
GGCCACCCCTGAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCG
AGTCCTCCGAGGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCC
TTCGGTAAGAGCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGA
GGCTTCCAAGGCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGC
CCCTCTACGTTGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTC
GAGGCTAGCATCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGC
TGCCGCTGGTATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCC
CCGGCCAGCAGGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCC
CCTCAGCCCGGTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTA
CCCCGGTCCCTTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACC
AGCAGATTCCCCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGC
CCTGGTGGCATCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCA
GTTCGGACGCGGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGG
GTCAGGGTATGCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCT
GTTCAGCAGGGTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGC
TGCTGCGCCCGCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTC
AGACTCTGGGTGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAG
GCTCTCTACCCCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGAT
CACTGGTATGCTTCTGGAGATGGACAACACCGAGTTGCTCAGCCTGCTTG
AGGACGAGGAAGCCCTGCGCGCCAAGGTCGATGAGGCCCTTAGCGTTTAC
GATGAGTACATGAAGAACAAGGGCACCGAGTCCGAGGCTCCTGCCGCTGA
GGCTGCCAAGCCCGAGGCGGAGAAGGAGGCCTCGACCGAGGAGAACAAGG
CGTAAATGTCTGCCGACGTCTCTACCACCCCCGCCGCCGAGAACGTCAAC
GGCGCCGCTGAGGCCAGCCCTGCTCCTGCTGCTGCTGCCCCCAGTGCCAC
CACCCCCGAGGTCACTGCCGTTGAGAACTCTACTCCGGCTCCCGCTGCCA
ACCAGCCTCACTCGGCTTCCCTCTATGTCGGTGAACTCGACCCCTCGGTG
ACCGAGGCCATGCTCTACGAGCTCTTCTCTTCCATCGGCCAGGTTGCCTC
CATCCGTGTCTGCCGTGATGCCGTCACCAGACGCTCTCTTGGATACGCCT
ACGTTAACTACAACAACACCGCCGATGGTGAGCGTGCTCTGGAAGACCTC
AACTACACTCTGATCAAGGGCAAGCCCTGCCGTATCATGTGGTCCCAGCG
TGACCCCGCTCTCCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACC
TGGACAGCGCCATTGACAACAAGGCTCTCCACGACACCTTCGCTGCCTTC
GGCAACATCCTCAGCTGCAAGGTCGCTCAGGATGAGTTCGGCAACTCCAA
GGGATACGGTTTCGTCCACTACGAGACTGCTGAGGCTGCCAACAACGCCA
TCAAGCACGTCAACGGCATGCTGTTGAACGACAAGAAGGTCTTCGTCGGC
CACCACATCTCCAAGAAGGACCGCCAGAGCAAGTTCGAGGAGATGAAGGC
CAACTTCACCAACGTCTACATCAAGAACCTCGACTCTGAGATCGATGACG
ATGAGTTCCGCAAGATGTTCGAGAAGTTCGGTGAGATCACCTCCGCCACC
CTCAGCCGTGACCAGGAGGGCAAGAGCCGTGGCTTCGGTTTTGTCAACTT
CTCTACCCACGAGAGCGCGCAGGCCGCCGTCGAGGAGATGAACGACAAGG
AGATCCGCAGCCAGAAGCTCTACGTCGGTCGTGCCCAGAAGAAGCACGAG
CGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGGC
TTCCAAGTACCAGGGTGTCAACCTCTACGTGAAGAACCTGACCGATGACA
TTGATGATGAGAAGCTCCGTGAGCTCTTCGGACCTTACGGCACCATCACC
TCTGCCAAGGTTATGCGCGACACCAACGTCGAGCGCGACCAGTCTCCCGA
CTCTGCTGGTAAGGAGAAGGAGGCTGACAAGGAGAACGACAAGGAGGCCA
CCCCTGAGGCTGAGAAGGCTGAGAAGGCCGAGGAGAAGCCCAGCGAGTCC
TCCGAGGAGAAGGACAAGGAGGCCAAGAAGTCTGACAAGAAGCCCTTCGG
TAAGAGCAAGGGTTTCGGTTTCGTCTGCTTCAGCAGCCCCGATGAGGCTT
CCAAGGCCGTTACCGAGATGAACCAGAGAATGGTCAACGGCAAGCCCCTC
TACGTTGCCCTTGCCCAGCGCAAGGATGTCCGCCGCAGCCAGCTCGAGGC
TAGCATCCAGGCTCGCAACACCATCAGACAGCAGCAGGCCGCCGCTGCCG
CTGGTATGCCCCAGCCTTACATGCAGCCCGCTGTCTTCTACGGCCCCGGC
CAGCAGGGCTTCATCCCTGGTGGTCAGCGCGGCATGGCCTTCCCCCCTCA
GCCCGGTATGGTGATGGGTATCCCCGGTGGACGCCCCGGCCAGTACCCCG
GTCCCTTCCCCGGCCAGCAGGGTGGTCGCGGCATGGGCCCCAACCAGCAG
ATTCCCCCCAACTTTGCTCAGGGTATCCCCATGGGCATGCAGGGCCCTGG
TGGCATCCCTAACGGCATGGGATACCCCCAGATGGCTCAGGTGCAGTTCG
GACGCGGCGCTGGTGGCCGTGGTCAGGTCCCCGGAATGCCCATGGGTCAG
GGTATGCGTGGCGGTCCCGGTTACGGTCAGGGCCGTGGTGCTCCTGTTCA
GCAGGGTCAGATGCGCCCTGGCCAGGGTGGTCGCGGACAGAACGCTGCTG
CGCCCGCTGGTCCTCAGGAGGGTGCCGCTGGTGGTGTTAACGCTCAGACT
CTGGGTGCCGCTCCCCCGGCCCAGCAGAAGCAGATGCTCGGCGAGGCTCT
CTACCCCAAGATCCAGGCCCAGCAGCCTGAGCTGGCTGGTAAGATCACTG
GTATGCTTCTGGAGATGGACAACACCGAGTTGCTCAGCCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR036053 |
| DBxref | InterPro:IPR006515 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR002004 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF00658 |
| Product | Protein phosphatase PP2A regulatory subunit B |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:719564..721921 - |
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