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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:743281..744574+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000270-T1 ID=CBS51388_000270-T1|Name=CBS51388_000270-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1294bp|location=Sequence derived from alignment at An01:743281..744574+ (Aspergillus niger CBS 513.88)
ATGCCGCCGCGTCTCAACCTTTTTACCGCACGGGCGGTTCCCGTTCTTCG
CCAGTCCGCCAACAGCTCGGCGGCTTCCCGACGCAGTTTTGCGACCATCC
TCAACACCAACCGGCCTTGCGCGGCCTCGACCGGCCATGGCCTGAAATCC
GGCCTGTCAGCTTCCGTCCGGGGACAGAGGAGGTGCAACTCCTCGGGCTC
TGATGGTCAGGATAGACCCAAGGGCCCGACCGAGGACCCTTTGCCCCATG
TTAGCGAAGAGGCCGCGGAGGTCAGCAAGATCATGGATAAGAAGTGCGAT
GGTACTCCTGCTAGTCCTGAGTTGGAACAGGGATCGCCTATTTCTGAGGT
GCGTTTCTTTCTTGGATGTCGTGTTGTGGCTGTTGCTGCTGCGGCTGCGG
CTGCTTCCCTGTTTTGACGCTCTCCCCGCGGTATCTGGGTCCTTATTGAC
TATTGTCTCTGCATAGATCCTGCAACGTGATAAAGAGGCCCTAAAGCATA
TGCCCAAGGTCATGCAAGACCAGATGAAGCGTCCATCCGGTAGCCGTTCA
TTCTCGACGTCCGCTCGCCGCCTGCAGCCAGAACTTCAGGGAAAGGAATT
GGACGATGCCTCGGCGTCGGTCGTTGCCAATATGATCTCCCAGGTTAACC
AGCAGGCCACGGAGCTGCACCCTGGACTCAAGTTCGAAGCGCCCCAGAAT
CTTCCCAAGACCGAGAACTTCCGCAAGAGATATGAGACGATAGTGGAGCA
GTTCACTAAGCTGCTGATGCAAGATGGCAAGCTGAGCAAGGCTCAGAACG
TACGTTCTACTATGCAGAGTGACCTTCTTTTCTTTGACAGGATCAGGACT
GATTTTGACTTTCTGGGTTAGACCATGGCATTCATTCTGGATCACTTGCG
CACTGCTCCTCCCCCTAACATCAACCCCCGGCGCCGCTTGCTCCCGGGTC
CTCCCGCTCCTCAGCTCCCTCTTAACCCCGTCCTCTATCTCACCTTGATT
GTCGACTCCGTCGCGCCTTTGCTCAAGCTCCGTCAACAGAAGGGTATCGT
TGGTGGTGGTGTGTCTGTGCAGGTCCCTTCTCCTCTCGCGCTGAGACAGC
GCCGGAGGACCGCGATCAAGTGGATTATTGATGCCTCTGACAAGCGTAGG
GATGCTATTTTTGGCCAGCGCGTGGCTAATGAGCTGGTTGCCGTTGCTGA
GGGCCGCAGTGGAGTGTGGGATAAGAGAGAGCAAGTGCACAAGCTGGGTG
TGGCTGGCCGTTCTAACCTTGGATTGGTTGCGCGCCGGAGGTAA back to topCoding sequence (CDS) from alignment at An01:743281..744574+ >CBS51388_000270-T1 ID=CBS51388_000270-T1|Name=CBS51388_000270-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3312bp|location=Sequence derived from alignment at An01:743281..744574+ (Aspergillus niger CBS 513.88)
ATGCCGCCGCGTCTCAACCTTTTTACCGCACGGGCGGTTCCCGTTCTTCG
CCAGTCCGCCAACAGCTCGGCGGCTTCCCGACGCAGTTTTGCGACCATCC
TCAACACCAACCGGCCTTGCGCGGCCTCGACCGGCCATGGCCTGAAATCC
GGCCTGTCAGCTTCCGTCCGGGGACAGAGGAGGTGCAACTCCTCGGGCTC
TGATGGTCAGGATAGACCCAAGGGCCCGACCGAGGACCCTTTGCCCCATG
TTAGCGAAGAGGCCGCGGAGGTCAGCAAGATCATGGATAAGAAGTGCGAT
GGTACTCCTGCTAGTCCTGAGTTGGAACAGGGATCGCCTATTTCTGAGAT
CCTGCAACGTGATAAAGAGGCCCTAAAGCATATGCCCAAGGTCATGCAAG
ACCAGATGAAGCGTCCATCCGGTAGCCGTTCATTCTCGACGTCCGCTCGC
CGCCTGCAGCCAGAACTTCAGGGAAAGGAATTGGACGATGCCTCGGCGTC
GGTCGTTGCCAATATGATCTCCCAGGTTAACCAGCAGGCCACGGAGCTGC
ACCCTGGACTCAAGTTCGAAGCGCCCCAGAATCTTCCCAAGACCGAGAAC
TTCCGCAAGAGATATGAGACGATAGTGGAGCAGTTCACTAAGCTGCTGAT
GCAAGATGGCAAGCTGAGCAAGGCTCAGAACACCATGGCATTCATTCTGG
ATCACTTGCGCACTGCTCCTCCCCCTAACATCAACCCCCGGCGCCGCTTG
CTCCCGGGTCCTCCCGCTCCTCAGCTCCCTCTTAACCCCGTCCTCTATCT
CACCTTGATTGTCGACTCCGTCGCGCCTTTGCTCAAGCTCCGTCAACAGA
AGGGTATCGTTGGTGGTGGTGTGTCTGTGCAGGTCCCTTCTCCTCTCGCG
CTGAGACAGCGCCGGAGGACCGCGATCAAGTGGATTATTGATGCCTCTGA
CAAGCGTAGGGATGCTATTTTTGGCCAGCGCGTGGCTAATGAGCTGGTTG
CCGTTGCTGAGGGCCGCAGTGGAGTGTGGGATAAGAGAGAGCAAGTGCAC
AAGCTGGGTGTGGCTGGCCGTTCTAACCTTGGATTGGTTGCGCGCCGGAG
GTAAATGCCGCCGCGTCTCAACCTTTTTACCGCACGGGCGGTTCCCGTTC
TTCGCCAGTCCGCCAACAGCTCGGCGGCTTCCCGACGCAGTTTTGCGACC
ATCCTCAACACCAACCGGCCTTGCGCGGCCTCGACCGGCCATGGCCTGAA
ATCCGGCCTGTCAGCTTCCGTCCGGGGACAGAGGAGGTGCAACTCCTCGG
GCTCTGATGGTCAGGATAGACCCAAGGGCCCGACCGAGGACCCTTTGCCC
CATGTTAGCGAAGAGGCCGCGGAGGTCAGCAAGATCATGGATAAGAAGTG
CGATGGTACTCCTGCTAGTCCTGAGTTGGAACAGGGATCGCCTATTTCTG
AGATCCTGCAACGTGATAAAGAGGCCCTAAAGCATATGCCCAAGGTCATG
CAAGACCAGATGAAGCGTCCATCCGGTAGCCGTTCATTCTCGACGTCCGC
TCGCCGCCTGCAGCCAGAACTTCAGGGAAAGGAATTGGACGATGCCTCGG
CGTCGGTCGTTGCCAATATGATCTCCCAGGTTAACCAGCAGGCCACGGAG
CTGCACCCTGGACTCAAGTTCGAAGCGCCCCAGAATCTTCCCAAGACCGA
GAACTTCCGCAAGAGATATGAGACGATAGTGGAGCAGTTCACTAAGCTGC
TGATGCAAGATGGCAAGCTGAGCAAGGCTCAGAACACCATGGCATTCATT
CTGGATCACTTGCGCACTGCTCCTCCCCCTAACATCAACCCCCGGCGCCG
CTTGCTCCCGGGTCCTCCCGCTCCTCAGCTCCCTCTTAACCCCGTCCTCT
ATCTCACCTTGATTGTCGACTCCGTCGCGCCTTTGCTCAAGCTCCGTCAA
CAGAAGGGTATCGTTGGTGGTGGTGTGTCTGTGCAGGTCCCTTCTCCTCT
CGCGCTGAGACAGCGCCGGAGGACCGCGATCAAGTGGATTATTGATGCCT
CTGACAAGCGTAGGGATGCTATTTTTGGCCAGCGCGTGGCTAATGAGCTG
GTTGCCGTTGCTGAGGGCCGCAGTGGAGTGTGGGATAAGAGAGAGCAAGT
GCACAAGCTGGGTGTGGCTGGCCGTTCTAACCTTGGATTGGTTGCGCGCC
GGAGGTAAATGCCGCCGCGTCTCAACCTTTTTACCGCACGGGCGGTTCCC
GTTCTTCGCCAGTCCGCCAACAGCTCGGCGGCTTCCCGACGCAGTTTTGC
GACCATCCTCAACACCAACCGGCCTTGCGCGGCCTCGACCGGCCATGGCC
TGAAATCCGGCCTGTCAGCTTCCGTCCGGGGACAGAGGAGGTGCAACTCC
TCGGGCTCTGATGGTCAGGATAGACCCAAGGGCCCGACCGAGGACCCTTT
GCCCCATGTTAGCGAAGAGGCCGCGGAGGTCAGCAAGATCATGGATAAGA
AGTGCGATGGTACTCCTGCTAGTCCTGAGTTGGAACAGGGATCGCCTATT
TCTGAGATCCTGCAACGTGATAAAGAGGCCCTAAAGCATATGCCCAAGGT
CATGCAAGACCAGATGAAGCGTCCATCCGGTAGCCGTTCATTCTCGACGT
CCGCTCGCCGCCTGCAGCCAGAACTTCAGGGAAAGGAATTGGACGATGCC
TCGGCGTCGGTCGTTGCCAATATGATCTCCCAGGTTAACCAGCAGGCCAC
GGAGCTGCACCCTGGACTCAAGTTCGAAGCGCCCCAGAATCTTCCCAAGA
CCGAGAACTTCCGCAAGAGATATGAGACGATAGTGGAGCAGTTCACTAAG
CTGCTGATGCAAGATGGCAAGCTGAGCAAGGCTCAGAACACCATGGCATT
CATTCTGGATCACTTGCGCACTGCTCCTCCCCCTAACATCAACCCCCGGC
GCCGCTTGCTCCCGGGTCCTCCCGCTCCTCAGCTCCCTCTTAACCCCGTC
CTCTATCTCACCTTGATTGTCGACTCCGTCGCGCCTTTGCTCAAGCTCCG
TCAACAGAAGGGTATCGTTGGTGGTGGTGTGTCTGTGCAGGTCCCTTCTC
CTCTCGCGCTGAGACAGCGCCGGAGGACCGCGATCAAGTGGATTATTGAT
GCCTCTGACAAGCGTAGGGATGCTATTTTTGGCCAGCGCGTGGCTAATGA
GCTGGTTGCCGTTGCTGAGGGCCGCAGTGGAGTGTGGGATAAGAGAGAGC
AAGTGCACAAGCTGGGTGTGGCTGGCCGTTCTAACCTTGGATTGGTTGCG
CGCCGGAGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264R1U |
| DBxref | InterPro:IPR036823 |
| DBxref | InterPro:IPR023798 |
| DBxref | PFAM:PF00177 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:743281..744574 + |
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