|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:756995..757680+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000275-T1 ID=CBS51388_000275-T1|Name=CBS51388_000275-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=686bp|location=Sequence derived from alignment at An01:756995..757680+ (Aspergillus niger CBS 513.88)
ATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAA
GAGGGCCACCTACCGCAAGAAGAGGTATGCATGAGTTCCTATTGTCTTTC
TTACTCAACCAACTACACTACGAAAGAAACAACGACTGACGCACGGCAAT
TCAACAGGGCGTTCGAGAAGGGTCGCCAGCCCTCCAACACCCGTATCGGA
ACCAAGAGAATCCACCTGGTCCGCACCCGTGGTGGTAACCAGAAGTTCCG
TGCCCTTCGTCTCGAATCCGGCAACTTCTCGTGGGGTTCTGAGGGTATCT
CCCGCAAGACCCGTGTCATCGTTGTGGCCTACCACCCCTCCAACAACGAA
CTGGTCCGCACCAACACCCTGACCAAGTCGGCCGTCGTTCAGATCGATGC
TGCTCCTTTCCGTCAATGGTACGAGGCCCACTACGGCCAGCCTATCGGCC
GCCGTCGCCAGCAGAAGACCGAGACCACCGAGGAGAAGAAGTCCAACAGC
GTTGTGAAGAAGCAGGCTGCTCGCTTTGCTGAGCAGGGCAAGGTCGAGTC
TGCCGTCGAGCGTCAGTTCGAGTCCGGACGTCTGTACGCTGTTGTGTCGT
CCCGCCCCGGCCAGAGCGGCCGCGTGGACGGATACATCCTGGAGGGTGAG
GAGCTGGCTTTCTACCAGCGTGCTATCCGCAAGTAA back to topCoding sequence (CDS) from alignment at An01:756995..757680+ >CBS51388_000275-T1 ID=CBS51388_000275-T1|Name=CBS51388_000275-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1206bp|location=Sequence derived from alignment at An01:756995..757680+ (Aspergillus niger CBS 513.88)
ATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGCGAA
GAGGGCCACCTACCGCAAGAAGAGGGCGTTCGAGAAGGGTCGCCAGCCCT
CCAACACCCGTATCGGAACCAAGAGAATCCACCTGGTCCGCACCCGTGGT
GGTAACCAGAAGTTCCGTGCCCTTCGTCTCGAATCCGGCAACTTCTCGTG
GGGTTCTGAGGGTATCTCCCGCAAGACCCGTGTCATCGTTGTGGCCTACC
ACCCCTCCAACAACGAACTGGTCCGCACCAACACCCTGACCAAGTCGGCC
GTCGTTCAGATCGATGCTGCTCCTTTCCGTCAATGGTACGAGGCCCACTA
CGGCCAGCCTATCGGCCGCCGTCGCCAGCAGAAGACCGAGACCACCGAGG
AGAAGAAGTCCAACAGCGTTGTGAAGAAGCAGGCTGCTCGCTTTGCTGAG
CAGGGCAAGGTCGAGTCTGCCGTCGAGCGTCAGTTCGAGTCCGGACGTCT
GTACGCTGTTGTGTCGTCCCGCCCCGGCCAGAGCGGCCGCGTGGACGGAT
ACATCCTGGAGGGTGAGGAGCTGGCTTTCTACCAGCGTGCTATCCGCAAG
TAAATGGGTATCTCACGCGACTCTCGTCACAAGCGCTCGGCTACCGGCGC
GAAGAGGGCCACCTACCGCAAGAAGAGGGCGTTCGAGAAGGGTCGCCAGC
CCTCCAACACCCGTATCGGAACCAAGAGAATCCACCTGGTCCGCACCCGT
GGTGGTAACCAGAAGTTCCGTGCCCTTCGTCTCGAATCCGGCAACTTCTC
GTGGGGTTCTGAGGGTATCTCCCGCAAGACCCGTGTCATCGTTGTGGCCT
ACCACCCCTCCAACAACGAACTGGTCCGCACCAACACCCTGACCAAGTCG
GCCGTCGTTCAGATCGATGCTGCTCCTTTCCGTCAATGGTACGAGGCCCA
CTACGGCCAGCCTATCGGCCGCCGTCGCCAGCAGAAGACCGAGACCACCG
AGGAGAAGAAGTCCAACAGCGTTGTGAAGAAGCAGGCTGCTCGCTTTGCT
GAGCAGGGCAAGGTCGAGTCTGCCGTCGAGCGTCAGTTCGAGTCCGGACG
TCTGTACGCTGTTGTGTCGTCCCGCCCCGGCCAGAGCGGCCGCGTGGACG
GATACATCCTGGAGGGTGAGGAGCTGGCTTTCTACCAGCGTGCTATCCGC
AAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022309 |
| DBxref | InterPro:IPR001047 |
| DBxref | PFAM:PF01201 |
| Product | ribosomal protein S8A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:756995..757680 + |
|
