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CBS51388_000282-T1, CBS51388_000282-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000282-T1
Unique NameCBS51388_000282-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:781851..783725-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000282-T1 ID=CBS51388_000282-T1|Name=CBS51388_000282-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An01:781851..783725- (Aspergillus niger CBS 513.88)
ATGCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTT
GCCATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGCTGGCGCCTAC
ACCACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAG
ACCAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCA
GGCACTCACATCTCGCTCTCGGGCATTAGACAAACACGCAGTCGTCGGAA
GATTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCA
ACACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTA
TGAAGTCTGGAATGGCTCTTCATGGAACGACCGGAAGGAGGTGCTCGCCT
GGGGCGCGGCAGATGAACTAGTTCTGCGCATCGCTGAACCTGGCCCCAAT
TCAAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGCAGCCA
TGATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGG
AGCCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTC
CATCTCTCTATCGACCCTAATATCGCCTGCCATATTTACAAGCAGCGGTT
CATGACTTCCGGAGGGGGCATAGAGAGAACAGATATGAGTGACGGAAAGG
ACCCGATCTTATCTGCCCACTTGAGCGACGGATCGATATCTTTCTTCAGC
ACCACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCTGA
TTCTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCC
TTTCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATT
ACTATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAA
TGTGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGAT
CCAACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTC
GCAGCCTGGGGTGATCGAGCTATCAGGTACAACCACCCCATTTGCCATTA
TTCCACGCTCTATGCTAACACTCTCAGACTGCACGACCTCCGCTCAAACG
AAGAATACGAAAAGACCTACCGTGATACCACGGACCAGAACCCCATCTAC
TGCATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGA
CGCCCTAGTCAAGATCTTTGATTTACGCATGCCCAAACATGACACATACA
GCTATCGTGATGCACGCCCTTCCCGAACCCTTCTCAAAAACAACGAACCA
ATCGTAGACAGCCTCTCAAGCCTCTCCCTCACCGCAACCAACAATAGCAT
CGCCTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCTCCCT
CTAGCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGCGGT
GCAATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACAC
TGGCGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGATGACC
TCCTCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAAC
GATGTGCGTCTCGAGAACACTGTTGCACACACCCGCTCTGCCGACAAAGT
CCTGGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATCA
CTTTGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTT
GCGGAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACC
GGGGGCGTGGAGACGGGCTGATTGA
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Coding sequence (CDS) from alignment at An01:781851..783725-

>CBS51388_000282-T1 ID=CBS51388_000282-T1|Name=CBS51388_000282-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1875bp|location=Sequence derived from alignment at An01:781851..783725- (Aspergillus niger CBS 513.88)
ATGCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTT
GCCATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGCTGGCGCCTAC
ACCACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAG
ACCAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCA
GGCACTCACATCTCGCTCTCGGGCATTAGACAAACACGCAGTCGTCGGAA
GATTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCA
ACACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTA
TGAAGTCTGGAATGGCTCTTCATGGAACGACCGGAAGGAGGTGCTCGCCT
GGGGCGCGGCAGATGAACTAGTTCTGCGCATCGCTGAACCTGGCCCCAAT
TCAAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGCAGCCA
TGATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGG
AGCCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTC
CATCTCTCTATCGACCCTAATATCGCCTGCCATATTTACAAGCAGCGGTT
CATGACTTCCGGAGGGGGCATAGAGAGAACAGATATGAGTGACGGAAAGG
ACCCGATCTTATCTGCCCACTTGAGCGACGGATCGATATCTTTCTTCAGC
ACCACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCTGA
TTCTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCC
TTTCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATT
ACTATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAA
TGTGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGAT
CCAACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTC
GCAGCCTGGGGTGATCGAGCTATCAGGTACAACCACCCCATTTGCCATTA
TTCCACGCTCTATGCTAACACTCTCAGACTGCACGACCTCCGCTCAAACG
AAGAATACGAAAAGACCTACCGTGATACCACGGACCAGAACCCCATCTAC
TGCATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGA
CGCCCTAGTCAAGATCTTTGATTTACGCATGCCCAAACATGACACATACA
GCTATCGTGATGCACGCCCTTCCCGAACCCTTCTCAAAAACAACGAACCA
ATCGTAGACAGCCTCTCAAGCCTCTCCCTCACCGCAACCAACAATAGCAT
CGCCTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCTCCCT
CTAGCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGCGGT
GCAATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACAC
TGGCGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGATGACC
TCCTCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAAC
GATGTGCGTCTCGAGAACACTGTTGCACACACCCGCTCTGCCGACAAAGT
CCTGGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATCA
CTTTGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTT
GCGGAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACC
GGGGGCGTGGAGACGGGCTGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000282CBS51388_000282Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000282-T1.cdsCBS51388_000282-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000282-T1.exon1CBS51388_000282-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000282-T1CBS51388_000282-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:781851..783725 -
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