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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:858185..859700- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000308-T1 ID=CBS51388_000308-T1|Name=CBS51388_000308-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1516bp|location=Sequence derived from alignment at An01:858185..859700- (Aspergillus niger CBS 513.88)
ATGTCTCGCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACCGTTAA
TGTTGAAGACTTTACCCGCACTCGCGACAGTGTAAGTTACCTTTTTCTTT
TTCTGATGTATCGTTTGTTTCCGTCGTTTTGCCCTCCGGCGCGCGCGCGC
GGCCTGCCGACTGCCTCCCTCCCTTAAGCTACGGTGGACGGGCGCTGCGC
TGGCCTCCCACCCCCCAAATTCACCACCACGCGTCCGTAAACAAAAGGCC
GCCCCGACGGGCTCAGCGCGACGCCGTTGGCTTTCATTTCCCCTCAACCC
AGCATTGTACTATCCCCTTGGTCTTCGCATTTGGATTGCTTCGCTTTATT
TCCCTTTCAGCTGGCTTTTCGGCTCTGATTTCCCTTTGTTTGCCCTCTCC
TTCGCTTCTGTAATCGCACCGCGCGTTTCCTTGGTTTCGCGCCAACGCCA
TTCCCCTTCCCAATGGCCCGGCGCGGACGCTCATCTCCAGAGCGGGCGCC
TTCAGCAGCGTCTGCCCCGGCGCTGGTGGCGCCCATCTCCCGTGCTACCG
TTGCCATCCATACCATCACTACTGGCATCCGCACCATTGCCACTGCTGCC
CCCCAACAAGCCCCACTAATTCATTCTCAGGTTGTCTCTAGCCTAGTGCA
GCTGTCGGCGGCTGTCTCCGAGCTGACCAAGGCCTATCTCAACCATGCCG
ATACTGTCCTGGGCCGCACCCCCACTGCTCTGGACATCAGCAGCATCACC
GGCATCACCAGCTCTCTGTATGAGTCTGGCCTGCTTGGTGCGCGTGCCAC
CAGCCCTGGCGCCAAGTCCGAAGTGGGCGAGAAGAAGAAGCGCAAGCGTG
CTCCCCCGGACCCCAACGCTCCCAAGCGCGCCTTGACCCCCTTCTTCCTC
TACATGCAGCACAACCGCTCCCGTATTGCTGAGGAGCTGGGCCCCAATGC
TAAGCCTAAGGAAGTCTCTGACGAGGGTACTCGCCGTTGGGCTGAGATGC
CTGAAGTCCAGAAGGAGGTACGTTGACATGCCCATTTGATTATAAAGAGC
GCCGTTGCTAACTCACGCGCAGGTCTGGAAGAAGCTGTATGCGGACAACC
TTGCTGTCTACAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTTAC
TCGGACGATGCCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGCGC
CGAGGCCACCGAGGCGTCTGAGGATGAGGAGCAGGAGTCCGAGGAAGAGT
CCGAGGAGGAGTCCTCTCCCGAGCCGGTCAAGGAGCCCACTCCCCCGCGC
AGCACCAAGCGCCGTCGTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCACC
GACCCCCAGCGAGAAGAAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGGGG
CCGCTGCCCGGAAGGAGAAGGAGCAGGAAGAGACCCCTGCTCGCAAGGCT
GCGGGTGGCGAGAACAAGCGCGCCACCAAGAAGAAGCGCAAGAGCGAGGC
CGGTGCTGAGGAGTAA back to topCoding sequence (CDS) from alignment at An01:858185..859700- >CBS51388_000308-T1 ID=CBS51388_000308-T1|Name=CBS51388_000308-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2736bp|location=Sequence derived from alignment at An01:858185..859700- (Aspergillus niger CBS 513.88)
GTCTGGAAGAAGCTGTATGCGGACAACCTTGCTGTCTACAAGGAGAAGGT
GAAGGCCTACAAGGCTGGCCTCCCTTACTCGGACGATGCCAAGGCTGCCA
GCCAGCTGCACCAGGGTATTGAGGGCGCCGAGGCCACCGAGGCGTCTGAG
GATGAGGAGCAGGAGTCCGAGGAAGAGTCCGAGGAGGAGTCCTCTCCCGA
GCCGGTCAAGGAGCCCACTCCCCCGCGCAGCACCAAGCGCCGTCGTAGCG
AGGGTAAGCCTGCTGCTAAGGAGGCACCGACCCCCAGCGAGAAGAAGAAG
GAGTCCCCCGAGAAGAAGAAGCGTGGGGCCGCTGCCCGGAAGGAGAAGGA
GCAGGAAGAGACCCCTGCTCGCAAGGCTGCGGGTGGCGAGAACAAGCGCG
CCACCAAGAAGAAGCGCAAGAGCGAGGCCGGTGCTGAGGAGTAAGTTGTC
TCTAGCCTAGTGCAGCTGTCGGCGGCTGTCTCCGAGCTGACCAAGGCCTA
TCTCAACCATGCCGATACTGTCCTGGGCCGCACCCCCACTGCTCTGGACA
TCAGCAGCATCACCGGCATCACCAGCTCTCTGTATGAGTCTGGCCTGCTT
GGTGCGCGTGCCACCAGCCCTGGCGCCAAGTCCGAAGTGGGCGAGAAGAA
GAAGCGCAAGCGTGCTCCCCCGGACCCCAACGCTCCCAAGCGCGCCTTGA
CCCCCTTCTTCCTCTACATGCAGCACAACCGCTCCCGTATTGCTGAGGAG
CTGGGCCCCAATGCTAAGCCTAAGGAAGTCTCTGACGAGGGTACTCGCCG
TTGGGCTGAGATGCCTGAAGTCCAGAAGGAGATGTCTCGCCGCGAAGATT
CCAAGGCTAGGGATGACACTGTCACCGTTAATGTTGAAGACTTTACCCGC
ACTCGCGACAGTGTCTGGAAGAAGCTGTATGCGGACAACCTTGCTGTCTA
CAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTTACTCGGACGATG
CCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGCGCCGAGGCCACC
GAGGCGTCTGAGGATGAGGAGCAGGAGTCCGAGGAAGAGTCCGAGGAGGA
GTCCTCTCCCGAGCCGGTCAAGGAGCCCACTCCCCCGCGCAGCACCAAGC
GCCGTCGTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCACCGACCCCCAGC
GAGAAGAAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGGGGCCGCTGCCCG
GAAGGAGAAGGAGCAGGAAGAGACCCCTGCTCGCAAGGCTGCGGGTGGCG
AGAACAAGCGCGCCACCAAGAAGAAGCGCAAGAGCGAGGCCGGTGCTGAG
GAGTAAGTTGTCTCTAGCCTAGTGCAGCTGTCGGCGGCTGTCTCCGAGCT
GACCAAGGCCTATCTCAACCATGCCGATACTGTCCTGGGCCGCACCCCCA
CTGCTCTGGACATCAGCAGCATCACCGGCATCACCAGCTCTCTGTATGAG
TCTGGCCTGCTTGGTGCGCGTGCCACCAGCCCTGGCGCCAAGTCCGAAGT
GGGCGAGAAGAAGAAGCGCAAGCGTGCTCCCCCGGACCCCAACGCTCCCA
AGCGCGCCTTGACCCCCTTCTTCCTCTACATGCAGCACAACCGCTCCCGT
ATTGCTGAGGAGCTGGGCCCCAATGCTAAGCCTAAGGAAGTCTCTGACGA
GGGTACTCGCCGTTGGGCTGAGATGCCTGAAGTCCAGAAGGAGATGTCTC
GCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACCGTTAATGTTGAA
GACTTTACCCGCACTCGCGACAGTGTCTGGAAGAAGCTGTATGCGGACAA
CCTTGCTGTCTACAAGGAGAAGGTGAAGGCCTACAAGGCTGGCCTCCCTT
ACTCGGACGATGCCAAGGCTGCCAGCCAGCTGCACCAGGGTATTGAGGGC
GCCGAGGCCACCGAGGCGTCTGAGGATGAGGAGCAGGAGTCCGAGGAAGA
GTCCGAGGAGGAGTCCTCTCCCGAGCCGGTCAAGGAGCCCACTCCCCCGC
GCAGCACCAAGCGCCGTCGTAGCGAGGGTAAGCCTGCTGCTAAGGAGGCA
CCGACCCCCAGCGAGAAGAAGAAGGAGTCCCCCGAGAAGAAGAAGCGTGG
GGCCGCTGCCCGGAAGGAGAAGGAGCAGGAAGAGACCCCTGCTCGCAAGG
CTGCGGGTGGCGAGAACAAGCGCGCCACCAAGAAGAAGCGCAAGAGCGAG
GCCGGTGCTGAGGAGTAAGTTGTCTCTAGCCTAGTGCAGCTGTCGGCGGC
TGTCTCCGAGCTGACCAAGGCCTATCTCAACCATGCCGATACTGTCCTGG
GCCGCACCCCCACTGCTCTGGACATCAGCAGCATCACCGGCATCACCAGC
TCTCTGTATGAGTCTGGCCTGCTTGGTGCGCGTGCCACCAGCCCTGGCGC
CAAGTCCGAAGTGGGCGAGAAGAAGAAGCGCAAGCGTGCTCCCCCGGACC
CCAACGCTCCCAAGCGCGCCTTGACCCCCTTCTTCCTCTACATGCAGCAC
AACCGCTCCCGTATTGCTGAGGAGCTGGGCCCCAATGCTAAGCCTAAGGA
AGTCTCTGACGAGGGTACTCGCCGTTGGGCTGAGATGCCTGAAGTCCAGA
AGGAGATGTCTCGCCGCGAAGATTCCAAGGCTAGGGATGACACTGTCACC
GTTAATGTTGAAGACTTTACCCGCACTCGCGACAGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036910 |
| DBxref | InterPro:IPR009071 |
| DBxref | PFAM:PF09011 |
| DBxref | PFAM:PF00505 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:858185..859700 - |
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