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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:864244..865813+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000311-T1 ID=CBS51388_000311-T1|Name=CBS51388_000311-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1570bp|location=Sequence derived from alignment at An01:864244..865813+ (Aspergillus niger CBS 513.88)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGTAAGCTATGTCCGGAAGCGTCGTGGATATACCA
TGCTAATGTTGTCTAGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGTATGTGC
TTCAATCATCAATGTTAGTTGCCGGTGCTAATAGCTGGTTTCAATAGGCT
GAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAA
GAATAGAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCTGACTA
CTTCAAGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACA
CATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAA
GCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGT
TCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATA
TACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCG
CAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTC
CTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGG
ATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGA
ATGTCTGTTGTCGAACCTTATCTACAAGGTGCGTGTTGAGGTGCCCGAAC
TCTATCAAAGCATTTGACTGACCAAAATTGTAGGGGTTGATGAAAGGATA
CATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCAT
TCCCTGGAACGGGGGTTTAA back to topCoding sequence (CDS) from alignment at An01:864244..865813+ >CBS51388_000311-T1 ID=CBS51388_000311-T1|Name=CBS51388_000311-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5640bp|location=Sequence derived from alignment at An01:864244..865813+ (Aspergillus niger CBS 513.88)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGCTGAAGA
GCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATA
GAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCTGACTACTTCA
AGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACATAC
CCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCT
TCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGAT
GCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTT
GCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGG
TCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATC
CGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGG
TACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTC
TGTTGTCGAACCTTATCTACAAGGGGTTGATGAAAGGATACATTGCCCGT
GAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAAC
GGGGGTTTAAATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGA
TCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCG
GAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACA
TGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGC
TTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGG
AAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAG
TTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCA
GGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTAT
TCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCT
TTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGA
CGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGA
ATGTTCACTTTGTGTCTAAGTGACCGGGCACCGATCGAGGAATCGCGGAA
ATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGC
TTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCG
TCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCAC
CTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCG
AAGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCC
ACAAAGAATAGAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCT
GACTACTTCAAGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCA
CCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTC
GAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGG
CGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGAC
GCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTC
TTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACA
GCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCAT
TAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAG
GTTGAATGTCTGTTGTCGAACCTTATCTACAAGGGGTTGATGAAAGGATA
CATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCAT
TCCCTGGAACGGGGGTTTAAATGTCCAATATCTTTGATGATTTCAAGGAA
GGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGT
CGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTA
ACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAAT
GGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTAC
CGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAA
GACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAAT
CAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCC
ATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAG
ATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAA
GATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGT
GCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGCACCGATCGAGG
AATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACA
TACTTTAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCT
CAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCC
ATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAG
AATTATGCCGAAGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAA
CAAACATGCCACAAAGAATAGAGAGTCAGTACTCCACATGCCGCCCCATG
CTACATTGCTGACTACTTCAAGATTGATTCTCACCTACCTCGTCCCCTGC
CACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTT
TCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGG
GAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTT
GTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTT
ACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCA
AGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTT
GCAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGA
CATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGGGGTTGA
TGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGT
GGAACTGCATTCCCTGGAACGGGGGTTTAAATGTCCAATATCTTTGATGA
TTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTC
TCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTAT
TACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTT
CCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCG
ATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGAC
GACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGA
TACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCT
GGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCG
ATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGA
TCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAG
CTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGCA
CCGATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTT
GTTCAAGACATACTTTAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGC
TGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTC
CCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTT
TCTGGATGAGAATTATGCCGAAGCTGAAGAGCATTTGTCGTACGCATGGA
GGATGTGCAACAAACATGCCACAAAGAATAGAGAGTCAGTACTCCACATG
CCGCCCCATGCTACATTGCTGACTACTTCAAGATTGATTCTCACCTACCT
CGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGC
TTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGC
ATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGA
AGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCG
ATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTT
GACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGT
TGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGT
CCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTAC
AAGGGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATT
GAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000717 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF01399 |
| Product | COP9 signalosome (CSN) subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:864244..865813 + |
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